RNA–Protein interactions for RNA: ENST00000605467.1

PBX1-220, Transcript of PBX homeobox 1, humanhuman

Gene PBX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-220ENST00000605467 CHGAP10645 457 aaKnown RBP11.87□□□□□ -0.51
PBX1-220ENST00000605467 FAM212AQ96EL1 285 aa11.85□□□□□ -0.51
PBX1-220ENST00000605467 CHRM1P11229 460 aaPredicted RBP11.84□□□□□ -0.51
PBX1-220ENST00000605467 RASEFQ8IZ41 740 aa11.84□□□□□ -0.51
PBX1-220ENST00000605467 HS6ST3Q8IZP7 471 aa11.84□□□□□ -0.51
PBX1-220ENST00000605467 SPRYD3Q8NCJ5 442 aa11.83□□□□□ -0.52
PBX1-220ENST00000605467 CFAP44Q96MT7 982 aa11.83□□□□□ -0.52
PBX1-220ENST00000605467 DNAJC5Q9H3Z4 198 aa11.83□□□□□ -0.52
PBX1-220ENST00000605467 RIOK3O14730 519 aaKnown RBP11.8□□□□□ -0.52
PBX1-220ENST00000605467 TAOK2Q9UL54 1235 aa11.77□□□□□ -0.53
PBX1-220ENST00000605467 KDM2AQ9Y2K7 1162 aa11.77□□□□□ -0.53
PBX1-220ENST00000605467 SGIP1Q9BQI5 828 aa11.74□□□□□ -0.53
PBX1-220ENST00000605467 CHADLQ6NUI6 762 aa11.73□□□□□ -0.53
PBX1-220ENST00000605467 VGFO15240 615 aaPredicted RBP11.72□□□□□ -0.53
PBX1-220ENST00000605467 TSHZ2Q9NRE2 1034 aa11.71□□□□□ -0.53
PBX1-220ENST00000605467 FARP1Q9Y4F1 1045 aaPredicted RBP11.7□□□□□ -0.54
PBX1-220ENST00000605467 NKX1-1Q15270 411 aaPredicted RBP11.69□□□□□ -0.54
PBX1-220ENST00000605467 PYGBP11216 843 aa11.68□□□□□ -0.54
PBX1-220ENST00000605467 FXR2P51116 673 aaKnown RBP eCLIP11.67□□□□□ -0.54
PBX1-220ENST00000605467 STK25O00506 426 aa11.64□□□□□ -0.55
PBX1-220ENST00000605467 BCANQ96GW7 911 aa11.64□□□□□ -0.55
PBX1-220ENST00000605467 GTPBP6O43824 516 aaPredicted RBP11.63□□□□□ -0.55
PBX1-220ENST00000605467 PRKAR2AP13861 404 aaKnown RBP11.63□□□□□ -0.55
PBX1-220ENST00000605467 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.62□□□□□ -0.55
PBX1-220ENST00000605467 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
PBX1-220ENST00000605467 TSPYL2Q9H2G4 693 aaPredicted RBP11.61□□□□□ -0.55
PBX1-220ENST00000605467 BCL11BQ9C0K0 894 aaPredicted RBP11.59□□□□□ -0.55
PBX1-220ENST00000605467 STK24Q9Y6E0 443 aa11.57□□□□□ -0.56
PBX1-220ENST00000605467 CCDC61Q9Y6R9 512 aa11.56□□□□□ -0.56
PBX1-220ENST00000605467 ZNF467Q7Z7K2 595 aaPredicted RBP11.55□□□□□ -0.56
PBX1-220ENST00000605467 CHRDL2Q6WN34 429 aa11.54□□□□□ -0.56
PBX1-220ENST00000605467 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
PBX1-220ENST00000605467 RYDENQ9NUL5 291 aaKnown RBP11.49□□□□□ -0.57
PBX1-220ENST00000605467 PDAP1Q13442 181 aaKnown RBP11.48□□□□□ -0.57
PBX1-220ENST00000605467 ZNF579Q8NAF0 562 aaKnown RBP11.48□□□□□ -0.57
PBX1-220ENST00000605467 PCDHB8Q9UN66 801 aa11.48□□□□□ -0.57
PBX1-220ENST00000605467 PCDHB13Q9Y5F0 798 aa11.48□□□□□ -0.57
PBX1-220ENST00000605467 PAK3O75914 559 aaPredicted RBP11.43□□□□□ -0.58
PBX1-220ENST00000605467 PSEN1P49768 467 aa11.42□□□□□ -0.58
PBX1-220ENST00000605467 KIF12Q96FN5 646 aa11.42□□□□□ -0.58
PBX1-220ENST00000605467 IFNL1Q8IU54 200 aa11.4□□□□□ -0.58
PBX1-220ENST00000605467 MAP3K13O43283 966 aa11.39□□□□□ -0.59
PBX1-220ENST00000605467 PRKCSHP14314 528 aaPredicted RBP11.34□□□□□ -0.59
PBX1-220ENST00000605467 MFRPQ9BY79 579 aa11.34□□□□□ -0.59
PBX1-220ENST00000605467 ZRANB1Q9UGI0 708 aa11.32□□□□□ -0.6
PBX1-220ENST00000605467 CD44P16070 742 aaKnown RBP11.31□□□□□ -0.6
PBX1-220ENST00000605467 SOX12O15370 315 aa11.27□□□□□ -0.61
PBX1-220ENST00000605467 NBR1Q14596 966 aa11.27□□□□□ -0.61
PBX1-220ENST00000605467 CADPS2Q86UW7 1296 aa11.27□□□□□ -0.61
PBX1-220ENST00000605467 EFCAB3Q8N7B9 438 aa11.27□□□□□ -0.61
PBX1-220ENST00000605467 FBXO22Q8NEZ5 403 aa11.27□□□□□ -0.61
PBX1-220ENST00000605467 PHF12Q96QT6 1004 aa11.26□□□□□ -0.61
PBX1-220ENST00000605467 CABP2Q9NPB3 220 aa11.26□□□□□ -0.61
PBX1-220ENST00000605467 TPRNQ4KMQ1 711 aa11.25□□□□□ -0.61
PBX1-220ENST00000605467 C19orf67A6NJJ6 358 aa11.24□□□□□ -0.61
PBX1-220ENST00000605467 NLRP6P59044 892 aa11.23□□□□□ -0.61
PBX1-220ENST00000605467 PPP1R37O75864 691 aa11.22□□□□□ -0.61
PBX1-220ENST00000605467 PHF8Q9UPP1 1060 aa11.21□□□□□ -0.61
PBX1-220ENST00000605467 P3H3Q8IVL6 736 aa11.16□□□□□ -0.62
PBX1-220ENST00000605467 MS4A3Q96HJ5 214 aa11.16□□□□□ -0.62
PBX1-220ENST00000605467 TRPC6Q9Y210 931 aa11.16□□□□□ -0.62
PBX1-220ENST00000605467 WDR70Q9NW82 654 aa11.15□□□□□ -0.62
PBX1-220ENST00000605467 MS4A4AQ96JQ5 239 aa11.14□□□□□ -0.63
PBX1-220ENST00000605467 TMEM106CQ9BVX2 250 aa11.14□□□□□ -0.63
PBX1-220ENST00000605467 KCNV2Q8TDN2 545 aa11.11□□□□□ -0.63
PBX1-220ENST00000605467 TIE1P35590 1138 aa11.09□□□□□ -0.63
PBX1-220ENST00000605467 ILDR1Q86SU0 546 aaPredicted RBP11.07□□□□□ -0.64
PBX1-220ENST00000605467 GOLGA2Q08379 1002 aa11.06□□□□□ -0.64
PBX1-220ENST00000605467 TTLL13PA6NNM8 815 aa11.05□□□□□ -0.64
PBX1-220ENST00000605467 MKRN3Q13064 507 aaKnown RBP11.05□□□□□ -0.64
PBX1-220ENST00000605467 NCKAP5LQ9HCH0 1330 aa11.05□□□□□ -0.64
PBX1-220ENST00000605467 BMP2KQ9NSY1 1161 aaPredicted RBP11.03□□□□□ -0.64
PBX1-220ENST00000605467 PDE4AP27815 886 aa11.02□□□□□ -0.65
PBX1-220ENST00000605467 CLCN6P51797 869 aa11.02□□□□□ -0.65
PBX1-220ENST00000605467 E2F4Q16254 413 aa11.02□□□□□ -0.65
PBX1-220ENST00000605467 ARHGEF1Q92888 912 aaKnown RBP11.02□□□□□ -0.65
PBX1-220ENST00000605467 MFSD10Q14728 455 aa11.01□□□□□ -0.65
PBX1-220ENST00000605467 CRISPLD2Q9H0B8 497 aa11.01□□□□□ -0.65
PBX1-220ENST00000605467 GALR2O43603 387 aaPredicted RBP11□□□□□ -0.65
PBX1-220ENST00000605467 EVX2Q03828 476 aa10.99□□□□□ -0.65
PBX1-220ENST00000605467 LARP6Q9BRS8 491 aaKnown RBP10.98□□□□□ -0.65
PBX1-220ENST00000605467 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.97□□□□□ -0.65
PBX1-220ENST00000605467 HAX1O00165 279 aa10.96□□□□□ -0.65
PBX1-220ENST00000605467 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.96□□□□□ -0.65
PBX1-220ENST00000605467 TRIM35Q9UPQ4 493 aa10.96□□□□□ -0.65
PBX1-220ENST00000605467 ARIH1Q9Y4X5 557 aaPredicted RBP10.93□□□□□ -0.66
PBX1-220ENST00000605467 CAMK2BQ13554 666 aa10.92□□□□□ -0.66
PBX1-220ENST00000605467 DDX27Q96GQ7 796 aaKnown RBP10.92□□□□□ -0.66
PBX1-220ENST00000605467 LMOD2Q6P5Q4 547 aa10.9□□□□□ -0.66
PBX1-220ENST00000605467 ATN1P54259 1190 aaPredicted RBP10.89□□□□□ -0.67
PBX1-220ENST00000605467 DPY19L2Q6NUT2 758 aa10.89□□□□□ -0.67
PBX1-220ENST00000605467 TESPA1A2RU30 521 aaPredicted RBP10.88□□□□□ -0.67
PBX1-220ENST00000605467 ATMINO43313 823 aaPredicted RBP10.88□□□□□ -0.67
PBX1-220ENST00000605467 ASTLQ6HA08 431 aaPredicted RBP10.88□□□□□ -0.67
PBX1-220ENST00000605467 PDCD7Q8N8D1 485 aaKnown RBP10.88□□□□□ -0.67
PBX1-220ENST00000605467 GPHNQ9NQX3 736 aaPredicted RBP10.88□□□□□ -0.67
PBX1-220ENST00000605467 SEMA3EO15041 775 aa10.86□□□□□ -0.67
PBX1-220ENST00000605467 IRX5P78411 483 aaPredicted RBP10.86□□□□□ -0.67
PBX1-220ENST00000605467 IER5LQ5T953 404 aa10.84□□□□□ -0.67
PBX1-220ENST00000605467 TULP1O00294 542 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms