RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 ATMINO43313 823 aaPredicted RBP9.16□□□□□ -0.94
IGHV3-29-201ENST00000604817 C7P10643 843 aa9.16□□□□□ -0.94
IGHV3-29-201ENST00000604817 OTUD5Q96G74 571 aa9.16□□□□□ -0.94
IGHV3-29-201ENST00000604817 PELP1Q8IZL8 1130 aaKnown RBP9.15□□□□□ -0.94
IGHV3-29-201ENST00000604817 METRNQ9UJH8 293 aa9.15□□□□□ -0.94
IGHV3-29-201ENST00000604817 POTEB2H3BUK9 544 aa9.13□□□□□ -0.95
IGHV3-29-201ENST00000604817 KIF12Q96FN5 646 aa9.13□□□□□ -0.95
IGHV3-29-201ENST00000604817 ZBTB47Q9UFB7 747 aaPredicted RBP9.12□□□□□ -0.95
IGHV3-29-201ENST00000604817 PLCD3Q8N3E9 789 aa9.11□□□□□ -0.95
IGHV3-29-201ENST00000604817 SLC24A1O60721 1099 aa9.1□□□□□ -0.95
IGHV3-29-201ENST00000604817 MAMSTRQ6ZN01 415 aa9.1□□□□□ -0.95
IGHV3-29-201ENST00000604817 TIE1P35590 1138 aa9.07□□□□□ -0.96
IGHV3-29-201ENST00000604817 ATN1P54259 1190 aaPredicted RBP9.07□□□□□ -0.96
IGHV3-29-201ENST00000604817 RASEFQ8IZ41 740 aa9.07□□□□□ -0.96
IGHV3-29-201ENST00000604817 MAP3K13O43283 966 aa9.06□□□□□ -0.96
IGHV3-29-201ENST00000604817 SGIP1Q9BQI5 828 aa9.04□□□□□ -0.96
IGHV3-29-201ENST00000604817 BMP2KQ9NSY1 1161 aaPredicted RBP9.04□□□□□ -0.96
IGHV3-29-201ENST00000604817 SCUBE2Q9NQ36 999 aa9.02□□□□□ -0.97
IGHV3-29-201ENST00000604817 FKBP8Q14318 412 aa8.99□□□□□ -0.97
IGHV3-29-201ENST00000604817 FAM212AQ96EL1 285 aa8.99□□□□□ -0.97
IGHV3-29-201ENST00000604817 TRPC6Q9Y210 931 aa8.99□□□□□ -0.97
IGHV3-29-201ENST00000604817 POTEJP0CG39 1038 aa8.98□□□□□ -0.97
IGHV3-29-201ENST00000604817 NUBP1P53384 320 aa8.98□□□□□ -0.97
IGHV3-29-201ENST00000604817 PCDHB13Q9Y5F0 798 aa8.98□□□□□ -0.97
IGHV3-29-201ENST00000604817 POTEMA6NI47 508 aa8.97□□□□□ -0.97
IGHV3-29-201ENST00000604817 TTLL13PA6NNM8 815 aa8.97□□□□□ -0.97
IGHV3-29-201ENST00000604817 PLSCR2Q9NRY7 297 aa8.97□□□□□ -0.97
IGHV3-29-201ENST00000604817 IER5LQ5T953 404 aa8.96□□□□□ -0.98
IGHV3-29-201ENST00000604817 POTEGQ6S5H5 508 aa8.95□□□□□ -0.98
IGHV3-29-201ENST00000604817 SEC24BO95487 1268 aa8.94□□□□□ -0.98
IGHV3-29-201ENST00000604817 PCDH10Q9P2E7 1040 aa8.94□□□□□ -0.98
IGHV3-29-201ENST00000604817 FBXO3Q9UK99 471 aa8.94□□□□□ -0.98
IGHV3-29-201ENST00000604817 POTEFA5A3E0 1075 aa8.93□□□□□ -0.98
IGHV3-29-201ENST00000604817 TRIM35Q9UPQ4 493 aa8.92□□□□□ -0.98
IGHV3-29-201ENST00000604817 IFNL1Q8IU54 200 aa8.9□□□□□ -0.98
IGHV3-29-201ENST00000604817 COLQQ9Y215 455 aaPredicted RBP8.88□□□□□ -0.99
IGHV3-29-201ENST00000604817 TMEM106CQ9BVX2 250 aa8.87□□□□□ -0.99
IGHV3-29-201ENST00000604817 DCAF8Q5TAQ9 597 aa8.86□□□□□ -0.99
IGHV3-29-201ENST00000604817 FAM163AQ96GL9 167 aaPredicted RBP8.85□□□□□ -0.99
IGHV3-29-201ENST00000604817 PLCG2P16885 1265 aa8.83□□□□□ -1
IGHV3-29-201ENST00000604817 LCE2DQ5TA82 110 aaPredicted RBP8.82□□□□□ -1
IGHV3-29-201ENST00000604817 PYGBP11216 843 aa8.8□□□□□ -1
IGHV3-29-201ENST00000604817 GSE1Q14687 1217 aa8.79□□□□□ -1
IGHV3-29-201ENST00000604817 RTN4Q9NQC3 1192 aaKnown RBP8.79□□□□□ -1
IGHV3-29-201ENST00000604817 IRX5P78411 483 aaPredicted RBP8.78□□□□□ -1
IGHV3-29-201ENST00000604817 VASPP50552 380 aaPredicted RBP8.77□□□□□ -1.01
IGHV3-29-201ENST00000604817 KLHL34Q8N239 644 aa8.77□□□□□ -1.01
IGHV3-29-201ENST00000604817 ZNF467Q7Z7K2 595 aaPredicted RBP8.76□□□□□ -1.01
IGHV3-29-201ENST00000604817 SLAIN1Q8ND83 568 aa8.76□□□□□ -1.01
IGHV3-29-201ENST00000604817 OCEL1Q9H607 264 aa8.76□□□□□ -1.01
IGHV3-29-201ENST00000604817 PCDHB8Q9UN66 801 aa8.74□□□□□ -1.01
IGHV3-29-201ENST00000604817 AMER1Q5JTC6 1135 aaPredicted RBP8.73□□□□□ -1.01
IGHV3-29-201ENST00000604817 CHRM1P11229 460 aaPredicted RBP8.72□□□□□ -1.01
IGHV3-29-201ENST00000604817 SNPHO15079 494 aa8.69□□□□□ -1.02
IGHV3-29-201ENST00000604817 GOLGA2Q08379 1002 aa8.69□□□□□ -1.02
IGHV3-29-201ENST00000604817 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.69□□□□□ -1.02
IGHV3-29-201ENST00000604817 ST18O60284 1047 aa8.67□□□□□ -1.02
IGHV3-29-201ENST00000604817 MKRN3Q13064 507 aaKnown RBP8.67□□□□□ -1.02
IGHV3-29-201ENST00000604817 CDAN1Q8IWY9 1227 aa8.66□□□□□ -1.02
IGHV3-29-201ENST00000604817 TMEM121BQ9BXQ6 578 aaPredicted RBP8.66□□□□□ -1.02
IGHV3-29-201ENST00000604817 L3MBTL3Q96JM7 780 aaPredicted RBP8.64□□□□□ -1.03
IGHV3-29-201ENST00000604817 PDCD7Q8N8D1 485 aaKnown RBP8.63□□□□□ -1.03
IGHV3-29-201ENST00000604817 PSEN1P49768 467 aa8.62□□□□□ -1.03
IGHV3-29-201ENST00000604817 SPOCK2Q92563 424 aa8.62□□□□□ -1.03
IGHV3-29-201ENST00000604817 PDAP1Q13442 181 aaKnown RBP8.61□□□□□ -1.03
IGHV3-29-201ENST00000604817 C3orf67Q6ZVT6 689 aa8.61□□□□□ -1.03
IGHV3-29-201ENST00000604817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.6□□□□□ -1.03
IGHV3-29-201ENST00000604817 CIZ1Q9ULV3 898 aaPredicted RBP8.57□□□□□ -1.04
IGHV3-29-201ENST00000604817 IFNLR1Q8IU57 520 aaPredicted RBP8.56□□□□□ -1.04
IGHV3-29-201ENST00000604817 ILDR1Q86SU0 546 aaPredicted RBP8.55□□□□□ -1.04
IGHV3-29-201ENST00000604817 TRIM41Q8WV44 630 aa8.54□□□□□ -1.04
IGHV3-29-201ENST00000604817 G3V3G9 751 aa8.53□□□□□ -1.04
IGHV3-29-201ENST00000604817 CABP2Q9NPB3 220 aa8.51□□□□□ -1.05
IGHV3-29-201ENST00000604817 MARVELD3Q96A59 401 aa8.49□□□□□ -1.05
IGHV3-29-201ENST00000604817 EMP3P54852 163 aa8.48□□□□□ -1.05
IGHV3-29-201ENST00000604817 BOLA1Q9Y3E2 137 aa8.48□□□□□ -1.05
IGHV3-29-201ENST00000604817 DPY19L2Q6NUT2 758 aa8.45□□□□□ -1.06
IGHV3-29-201ENST00000604817 SPNS2Q8IVW8 549 aa8.45□□□□□ -1.06
IGHV3-29-201ENST00000604817 MMRN1Q13201 1228 aa8.42□□□□□ -1.06
IGHV3-29-201ENST00000604817 HS3ST6Q96QI5 342 aa8.4□□□□□ -1.06
IGHV3-29-201ENST00000604817 FAM205CA6NFA0 338 aa8.39□□□□□ -1.07
IGHV3-29-201ENST00000604817 ZNF710Q8N1W2 664 aa8.39□□□□□ -1.07
IGHV3-29-201ENST00000604817 EFCAB3Q8N7B9 438 aa8.39□□□□□ -1.07
IGHV3-29-201ENST00000604817 DOK7Q18PE1 504 aa8.38□□□□□ -1.07
IGHV3-29-201ENST00000604817 SOX12O15370 315 aa8.37□□□□□ -1.07
IGHV3-29-201ENST00000604817 HOXB3P14651 431 aaPredicted RBP8.37□□□□□ -1.07
IGHV3-29-201ENST00000604817 RIOK3O14730 519 aaKnown RBP8.36□□□□□ -1.07
IGHV3-29-201ENST00000604817 RIMBP2O15034 1052 aa8.36□□□□□ -1.07
IGHV3-29-201ENST00000604817 VGFO15240 615 aaPredicted RBP8.35□□□□□ -1.07
IGHV3-29-201ENST00000604817 HOXB1P14653 301 aaPredicted RBP8.35□□□□□ -1.07
IGHV3-29-201ENST00000604817 KRTAP3-3Q9BYR6 98 aa8.34□□□□□ -1.07
IGHV3-29-201ENST00000604817 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
IGHV3-29-201ENST00000604817 POTEB3A0JP26 581 aa8.33□□□□□ -1.08
IGHV3-29-201ENST00000604817 POTEBQ6S5H4 581 aa8.33□□□□□ -1.08
IGHV3-29-201ENST00000604817 MICALL2Q8IY33 904 aa8.32□□□□□ -1.08
IGHV3-29-201ENST00000604817 TAOK2Q9UL54 1235 aa8.32□□□□□ -1.08
IGHV3-29-201ENST00000604817 ZSWIM6Q9HCJ5 1215 aa8.31□□□□□ -1.08
IGHV3-29-201ENST00000604817 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.3□□□□□ -1.08
IGHV3-29-201ENST00000604817 ZFP91Q96JP5 570 aaPredicted RBP8.3□□□□□ -1.08
IGHV3-29-201ENST00000604817 ERBB3P21860 1342 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms