RNA–Protein interactions for RNA: ENST00000604485.1

LINC01050-201, Transcript of long intergenic non-protein coding RNA 1050, humanhuman

TSL 3 BASIC

Gene LINC01050, Length 760 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01050-201ENST00000604485 PCDH10Q9P2E7 1040 aa12.4□□□□□ -0.42
LINC01050-201ENST00000604485 GALR2O43603 387 aaPredicted RBP12.38□□□□□ -0.43
LINC01050-201ENST00000604485 PKD2Q13563 968 aa12.24□□□□□ -0.45
LINC01050-201ENST00000604485 PLCD3Q8N3E9 789 aa12.24□□□□□ -0.45
LINC01050-201ENST00000604485 SPOCK2Q92563 424 aa12.24□□□□□ -0.45
LINC01050-201ENST00000604485 PELP1Q8IZL8 1130 aaKnown RBP12.22□□□□□ -0.45
LINC01050-201ENST00000604485 MIER1Q8N108 512 aa12.21□□□□□ -0.45
LINC01050-201ENST00000604485 KLHL34Q8N239 644 aa12.2□□□□□ -0.46
LINC01050-201ENST00000604485 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
LINC01050-201ENST00000604485 LCE2DQ5TA82 110 aaPredicted RBP12.18□□□□□ -0.46
LINC01050-201ENST00000604485 PHF12Q96QT6 1004 aa12.18□□□□□ -0.46
LINC01050-201ENST00000604485 POTEJP0CG39 1038 aa12.15□□□□□ -0.46
LINC01050-201ENST00000604485 PAK3O75914 559 aaPredicted RBP12.13□□□□□ -0.47
LINC01050-201ENST00000604485 METRNQ9UJH8 293 aa12.13□□□□□ -0.47
LINC01050-201ENST00000604485 SLC24A1O60721 1099 aa12.12□□□□□ -0.47
LINC01050-201ENST00000604485 ZBTB47Q9UFB7 747 aaPredicted RBP12.12□□□□□ -0.47
LINC01050-201ENST00000604485 MAMSTRQ6ZN01 415 aa12.11□□□□□ -0.47
LINC01050-201ENST00000604485 PLEKHG5O94827 1062 aa12.1□□□□□ -0.47
LINC01050-201ENST00000604485 FAM163AQ96GL9 167 aaPredicted RBP12.1□□□□□ -0.47
LINC01050-201ENST00000604485 ASTLQ6HA08 431 aaPredicted RBP12.08□□□□□ -0.48
LINC01050-201ENST00000604485 C7P10643 843 aa12.07□□□□□ -0.48
LINC01050-201ENST00000604485 SLC39A7Q92504 469 aa12.07□□□□□ -0.48
LINC01050-201ENST00000604485 MNX1P50219 401 aaPredicted RBP12.04□□□□□ -0.48
LINC01050-201ENST00000604485 ATMINO43313 823 aaPredicted RBP12.03□□□□□ -0.48
LINC01050-201ENST00000604485 NUBP1P53384 320 aa12□□□□□ -0.49
LINC01050-201ENST00000604485 SCUBE2Q9NQ36 999 aa12□□□□□ -0.49
LINC01050-201ENST00000604485 ECM2O94769 699 aaPredicted RBP11.99□□□□□ -0.49
LINC01050-201ENST00000604485 MS4A3Q96HJ5 214 aa11.99□□□□□ -0.49
LINC01050-201ENST00000604485 NPM1P06748 294 aaKnown RBP eCLIP11.94□□□□□ -0.5
LINC01050-201ENST00000604485 RGL2O15211 777 aa11.92□□□□□ -0.5
LINC01050-201ENST00000604485 TRIM41Q8WV44 630 aa11.92□□□□□ -0.5
LINC01050-201ENST00000604485 CDAN1Q8IWY9 1227 aa11.91□□□□□ -0.5
LINC01050-201ENST00000604485 CIZ1Q9ULV3 898 aaPredicted RBP11.91□□□□□ -0.5
LINC01050-201ENST00000604485 GSE1Q14687 1217 aa11.89□□□□□ -0.51
LINC01050-201ENST00000604485 DCAF8L2P0C7V8 631 aa11.87□□□□□ -0.51
LINC01050-201ENST00000604485 ATN1P54259 1190 aaPredicted RBP11.87□□□□□ -0.51
LINC01050-201ENST00000604485 PLCB2Q00722 1185 aa11.86□□□□□ -0.51
LINC01050-201ENST00000604485 POTEFA5A3E0 1075 aa11.84□□□□□ -0.51
LINC01050-201ENST00000604485 RASEFQ8IZ41 740 aa11.83□□□□□ -0.52
LINC01050-201ENST00000604485 RNF25Q96BH1 459 aaPredicted RBP11.82□□□□□ -0.52
LINC01050-201ENST00000604485 FAM212AQ96EL1 285 aa11.81□□□□□ -0.52
LINC01050-201ENST00000604485 CHRM1P11229 460 aaPredicted RBP11.78□□□□□ -0.52
LINC01050-201ENST00000604485 DCAF8Q5TAQ9 597 aa11.78□□□□□ -0.52
LINC01050-201ENST00000604485 BBXQ8WY36 941 aaPredicted RBP11.78□□□□□ -0.52
LINC01050-201ENST00000604485 ZCCHC6Q5VYS8 1495 aaKnown RBP11.76□□□□□ -0.53
LINC01050-201ENST00000604485 BMP2KQ9NSY1 1161 aaPredicted RBP11.73□□□□□ -0.53
LINC01050-201ENST00000604485 DCAF1Q9Y4B6 1507 aa11.71□□□□□ -0.53
LINC01050-201ENST00000604485 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
LINC01050-201ENST00000604485 HS6ST3Q8IZP7 471 aa11.7□□□□□ -0.54
LINC01050-201ENST00000604485 DNAJC5Q9H3Z4 198 aa11.7□□□□□ -0.54
LINC01050-201ENST00000604485 CCDC61Q9Y6R9 512 aa11.7□□□□□ -0.54
LINC01050-201ENST00000604485 MYO15BQ96JP2 1530 aa11.7□□□□□ -0.54
LINC01050-201ENST00000604485 RIOK3O14730 519 aaKnown RBP11.69□□□□□ -0.54
LINC01050-201ENST00000604485 MMRN1Q13201 1228 aa11.69□□□□□ -0.54
LINC01050-201ENST00000604485 KIF12Q96FN5 646 aa11.68□□□□□ -0.54
LINC01050-201ENST00000604485 TRPC6Q9Y210 931 aa11.68□□□□□ -0.54
LINC01050-201ENST00000604485 ABCC9O60706 1549 aa11.67□□□□□ -0.54
LINC01050-201ENST00000604485 ST18O60284 1047 aa11.67□□□□□ -0.54
LINC01050-201ENST00000604485 CHGAP10645 457 aaKnown RBP11.67□□□□□ -0.54
LINC01050-201ENST00000604485 COLQQ9Y215 455 aaPredicted RBP11.67□□□□□ -0.54
LINC01050-201ENST00000604485 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.66□□□□□ -0.54
LINC01050-201ENST00000604485 TIE1P35590 1138 aa11.65□□□□□ -0.54
LINC01050-201ENST00000604485 SEC24BO95487 1268 aa11.64□□□□□ -0.55
LINC01050-201ENST00000604485 SPNS2Q8IVW8 549 aa11.64□□□□□ -0.55
LINC01050-201ENST00000604485 SGIP1Q9BQI5 828 aa11.64□□□□□ -0.55
LINC01050-201ENST00000604485 VGFO15240 615 aaPredicted RBP11.62□□□□□ -0.55
LINC01050-201ENST00000604485 PYGBP11216 843 aa11.62□□□□□ -0.55
LINC01050-201ENST00000604485 TAOK2Q9UL54 1235 aa11.62□□□□□ -0.55
LINC01050-201ENST00000604485 NACADO15069 1562 aa11.58□□□□□ -0.55
LINC01050-201ENST00000604485 HAP1P54257 671 aaPredicted RBP11.58□□□□□ -0.56
LINC01050-201ENST00000604485 PAXIP1Q6ZW49 1069 aaPredicted RBP11.58□□□□□ -0.56
LINC01050-201ENST00000604485 SLAIN1Q8ND83 568 aa11.58□□□□□ -0.56
LINC01050-201ENST00000604485 TTLL13PA6NNM8 815 aa11.56□□□□□ -0.56
LINC01050-201ENST00000604485 MAP3K13O43283 966 aa11.56□□□□□ -0.56
LINC01050-201ENST00000604485 SPRYD3Q8NCJ5 442 aa11.55□□□□□ -0.56
LINC01050-201ENST00000604485 NKX1-1Q15270 411 aaPredicted RBP11.54□□□□□ -0.56
LINC01050-201ENST00000604485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.52□□□□□ -0.57
LINC01050-201ENST00000604485 IER5LQ5T953 404 aa11.52□□□□□ -0.57
LINC01050-201ENST00000604485 ZFP91Q96JP5 570 aaPredicted RBP11.52□□□□□ -0.57
LINC01050-201ENST00000604485 CFAP44Q96MT7 982 aa11.52□□□□□ -0.57
LINC01050-201ENST00000604485 STK25O00506 426 aa11.51□□□□□ -0.57
LINC01050-201ENST00000604485 ZNF467Q7Z7K2 595 aaPredicted RBP11.51□□□□□ -0.57
LINC01050-201ENST00000604485 VSIG10Q8N0Z9 540 aa11.51□□□□□ -0.57
LINC01050-201ENST00000604485 RB1CC1Q8TDY2 1594 aa11.5□□□□□ -0.57
LINC01050-201ENST00000604485 TRIM35Q9UPQ4 493 aa11.49□□□□□ -0.57
LINC01050-201ENST00000604485 TMEM121BQ9BXQ6 578 aaPredicted RBP11.47□□□□□ -0.57
LINC01050-201ENST00000604485 BCL11BQ9C0K0 894 aaPredicted RBP11.47□□□□□ -0.57
LINC01050-201ENST00000604485 GTPBP6O43824 516 aaPredicted RBP11.46□□□□□ -0.57
LINC01050-201ENST00000604485 KDM2AQ9Y2K7 1162 aa11.44□□□□□ -0.58
LINC01050-201ENST00000604485 PDAP1Q13442 181 aaKnown RBP11.43□□□□□ -0.58
LINC01050-201ENST00000604485 TSHZ2Q9NRE2 1034 aa11.43□□□□□ -0.58
LINC01050-201ENST00000604485 PCDHB8Q9UN66 801 aa11.43□□□□□ -0.58
LINC01050-201ENST00000604485 PCDHB13Q9Y5F0 798 aa11.43□□□□□ -0.58
LINC01050-201ENST00000604485 STK24Q9Y6E0 443 aa11.43□□□□□ -0.58
LINC01050-201ENST00000604485 IFNL1Q8IU54 200 aa11.4□□□□□ -0.58
LINC01050-201ENST00000604485 MARVELD3Q96A59 401 aa11.38□□□□□ -0.59
LINC01050-201ENST00000604485 PLCG2P16885 1265 aa11.36□□□□□ -0.59
LINC01050-201ENST00000604485 PSEN1P49768 467 aa11.36□□□□□ -0.59
LINC01050-201ENST00000604485 SNPHO15079 494 aa11.35□□□□□ -0.59
LINC01050-201ENST00000604485 RYDENQ9NUL5 291 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms