RNA–Protein interactions for RNA: ENST00000603844.1

FOCAD-210, Transcript of focadhesin, humanhuman

TSL 3

Gene FOCAD, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-210ENST00000603844 POTEB2H3BUK9 544 aa14.88□□□□□ -0.03
FOCAD-210ENST00000603844 ATMINO43313 823 aaPredicted RBP14.88□□□□□ -0.03
FOCAD-210ENST00000603844 KIF12Q96FN5 646 aa14.86□□□□□ -0.03
FOCAD-210ENST00000603844 OTUD5Q96G74 571 aa14.85□□□□□ -0.03
FOCAD-210ENST00000603844 RASEFQ8IZ41 740 aa14.84□□□□□ -0.03
FOCAD-210ENST00000603844 PLCD3Q8N3E9 789 aa14.84□□□□□ -0.03
FOCAD-210ENST00000603844 SLC39A7Q92504 469 aa14.83□□□□□ -0.04
FOCAD-210ENST00000603844 METRNQ9UJH8 293 aa14.82□□□□□ -0.04
FOCAD-210ENST00000603844 C7P10643 843 aa14.81□□□□□ -0.04
FOCAD-210ENST00000603844 FKBP8Q14318 412 aa14.8□□□□□ -0.04
FOCAD-210ENST00000603844 ZBTB47Q9UFB7 747 aaPredicted RBP14.77□□□□□ -0.05
FOCAD-210ENST00000603844 MAP3K13O43283 966 aa14.76□□□□□ -0.05
FOCAD-210ENST00000603844 ATN1P54259 1190 aaPredicted RBP14.75□□□□□ -0.05
FOCAD-210ENST00000603844 BMP2KQ9NSY1 1161 aaPredicted RBP14.72□□□□□ -0.05
FOCAD-210ENST00000603844 NUBP1P53384 320 aa14.71□□□□□ -0.05
FOCAD-210ENST00000603844 TRPC6Q9Y210 931 aa14.71□□□□□ -0.05
FOCAD-210ENST00000603844 TIE1P35590 1138 aa14.7□□□□□ -0.06
FOCAD-210ENST00000603844 POTEJP0CG39 1038 aa14.66□□□□□ -0.06
FOCAD-210ENST00000603844 SGIP1Q9BQI5 828 aa14.65□□□□□ -0.06
FOCAD-210ENST00000603844 MAMSTRQ6ZN01 415 aa14.63□□□□□ -0.07
FOCAD-210ENST00000603844 TTLL13PA6NNM8 815 aa14.6□□□□□ -0.07
FOCAD-210ENST00000603844 FAM212AQ96EL1 285 aa14.6□□□□□ -0.07
FOCAD-210ENST00000603844 PCDHB13Q9Y5F0 798 aa14.6□□□□□ -0.07
FOCAD-210ENST00000603844 POTEFA5A3E0 1075 aa14.58□□□□□ -0.08
FOCAD-210ENST00000603844 FBXO3Q9UK99 471 aa14.56□□□□□ -0.08
FOCAD-210ENST00000603844 SCUBE2Q9NQ36 999 aa14.53□□□□□ -0.08
FOCAD-210ENST00000603844 IFNL1Q8IU54 200 aa14.52□□□□□ -0.09
FOCAD-210ENST00000603844 TRIM35Q9UPQ4 493 aa14.5□□□□□ -0.09
FOCAD-210ENST00000603844 IER5LQ5T953 404 aa14.49□□□□□ -0.09
FOCAD-210ENST00000603844 POTEMA6NI47 508 aa14.48□□□□□ -0.09
FOCAD-210ENST00000603844 SEC24BO95487 1268 aa14.48□□□□□ -0.09
FOCAD-210ENST00000603844 COLQQ9Y215 455 aaPredicted RBP14.48□□□□□ -0.09
FOCAD-210ENST00000603844 DCAF8Q5TAQ9 597 aa14.45□□□□□ -0.1
FOCAD-210ENST00000603844 POTEGQ6S5H5 508 aa14.44□□□□□ -0.1
FOCAD-210ENST00000603844 TMEM106CQ9BVX2 250 aa14.42□□□□□ -0.1
FOCAD-210ENST00000603844 PLSCR2Q9NRY7 297 aa14.42□□□□□ -0.1
FOCAD-210ENST00000603844 PYGBP11216 843 aa14.38□□□□□ -0.11
FOCAD-210ENST00000603844 VASPP50552 380 aaPredicted RBP14.38□□□□□ -0.11
FOCAD-210ENST00000603844 LCE2DQ5TA82 110 aaPredicted RBP14.34□□□□□ -0.11
FOCAD-210ENST00000603844 KLHL34Q8N239 644 aa14.33□□□□□ -0.12
FOCAD-210ENST00000603844 FAM163AQ96GL9 167 aaPredicted RBP14.33□□□□□ -0.12
FOCAD-210ENST00000603844 PLCG2P16885 1265 aa14.3□□□□□ -0.12
FOCAD-210ENST00000603844 IRX5P78411 483 aaPredicted RBP14.29□□□□□ -0.12
FOCAD-210ENST00000603844 GSE1Q14687 1217 aa14.29□□□□□ -0.12
FOCAD-210ENST00000603844 PCDH10Q9P2E7 1040 aa14.29□□□□□ -0.12
FOCAD-210ENST00000603844 PCDHB8Q9UN66 801 aa14.29□□□□□ -0.12
FOCAD-210ENST00000603844 OCEL1Q9H607 264 aa14.22□□□□□ -0.13
FOCAD-210ENST00000603844 ZNF467Q7Z7K2 595 aaPredicted RBP14.21□□□□□ -0.13
FOCAD-210ENST00000603844 CHRM1P11229 460 aaPredicted RBP14.2□□□□□ -0.14
FOCAD-210ENST00000603844 SLAIN1Q8ND83 568 aa14.2□□□□□ -0.14
FOCAD-210ENST00000603844 IFNLR1Q8IU57 520 aaPredicted RBP14.1□□□□□ -0.15
FOCAD-210ENST00000603844 SPOCK2Q92563 424 aa14.1□□□□□ -0.15
FOCAD-210ENST00000603844 PSEN1P49768 467 aa14.08□□□□□ -0.16
FOCAD-210ENST00000603844 GOLGA2Q08379 1002 aa14.07□□□□□ -0.16
FOCAD-210ENST00000603844 MKRN3Q13064 507 aaKnown RBP14.07□□□□□ -0.16
FOCAD-210ENST00000603844 ST18O60284 1047 aa14.06□□□□□ -0.16
FOCAD-210ENST00000603844 PDCD7Q8N8D1 485 aaKnown RBP14.06□□□□□ -0.16
FOCAD-210ENST00000603844 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.06□□□□□ -0.16
FOCAD-210ENST00000603844 PDAP1Q13442 181 aaKnown RBP14.02□□□□□ -0.17
FOCAD-210ENST00000603844 CIZ1Q9ULV3 898 aaPredicted RBP14.02□□□□□ -0.17
FOCAD-210ENST00000603844 CDAN1Q8IWY9 1227 aa13.99□□□□□ -0.17
FOCAD-210ENST00000603844 L3MBTL3Q96JM7 780 aaPredicted RBP13.99□□□□□ -0.17
FOCAD-210ENST00000603844 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.99□□□□□ -0.175e-6■■□□□ 14.1
FOCAD-210ENST00000603844 SNPHO15079 494 aa13.98□□□□□ -0.17
FOCAD-210ENST00000603844 C3orf67Q6ZVT6 689 aa13.94□□□□□ -0.18
FOCAD-210ENST00000603844 ILDR1Q86SU0 546 aaPredicted RBP13.94□□□□□ -0.18
FOCAD-210ENST00000603844 TMEM121BQ9BXQ6 578 aaPredicted RBP13.94□□□□□ -0.18
FOCAD-210ENST00000603844 CABP2Q9NPB3 220 aa13.89□□□□□ -0.19
FOCAD-210ENST00000603844 TRIM41Q8WV44 630 aa13.87□□□□□ -0.19
FOCAD-210ENST00000603844 DPY19L2Q6NUT2 758 aa13.83□□□□□ -0.2
FOCAD-210ENST00000603844 MARVELD3Q96A59 401 aa13.8□□□□□ -0.2
FOCAD-210ENST00000603844 BOLA1Q9Y3E2 137 aa13.78□□□□□ -0.2
FOCAD-210ENST00000603844 G3V3G9 751 aa13.77□□□□□ -0.21
FOCAD-210ENST00000603844 EFCAB3Q8N7B9 438 aa13.72□□□□□ -0.21
FOCAD-210ENST00000603844 EMP3P54852 163 aa13.71□□□□□ -0.21
FOCAD-210ENST00000603844 RIOK3O14730 519 aaKnown RBP13.67□□□□□ -0.22
FOCAD-210ENST00000603844 SPNS2Q8IVW8 549 aa13.65□□□□□ -0.22
FOCAD-210ENST00000603844 RNF25Q96BH1 459 aaPredicted RBP13.65□□□□□ -0.22
FOCAD-210ENST00000603844 HOXB3P14651 431 aaPredicted RBP13.64□□□□□ -0.23
FOCAD-210ENST00000603844 MMRN1Q13201 1228 aa13.62□□□□□ -0.23
FOCAD-210ENST00000603844 HS3ST6Q96QI5 342 aa13.62□□□□□ -0.23
FOCAD-210ENST00000603844 VGFO15240 615 aaPredicted RBP13.61□□□□□ -0.23
FOCAD-210ENST00000603844 SOX12O15370 315 aa13.61□□□□□ -0.23
FOCAD-210ENST00000603844 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.6□□□□□ -0.23
FOCAD-210ENST00000603844 POTEB3A0JP26 581 aa13.6□□□□□ -0.23
FOCAD-210ENST00000603844 FAM205CA6NFA0 338 aa13.6□□□□□ -0.23
FOCAD-210ENST00000603844 POTEBQ6S5H4 581 aa13.6□□□□□ -0.23
FOCAD-210ENST00000603844 ZFP91Q96JP5 570 aaPredicted RBP13.6□□□□□ -0.23
FOCAD-210ENST00000603844 DOK7Q18PE1 504 aa13.56□□□□□ -0.24
FOCAD-210ENST00000603844 MICALL2Q8IY33 904 aa13.56□□□□□ -0.24
FOCAD-210ENST00000603844 ZNF710Q8N1W2 664 aa13.56□□□□□ -0.24
FOCAD-210ENST00000603844 HOXB1P14653 301 aaPredicted RBP13.55□□□□□ -0.24
FOCAD-210ENST00000603844 MS4A4AQ96JQ5 239 aa13.54□□□□□ -0.24
FOCAD-210ENST00000603844 KRTAP3-3Q9BYR6 98 aa13.54□□□□□ -0.24
FOCAD-210ENST00000603844 KRTAP3-2Q9BYR7 98 aa13.54□□□□□ -0.24
FOCAD-210ENST00000603844 PHF8Q9UPP1 1060 aa13.52□□□□□ -0.25
FOCAD-210ENST00000603844 TMEM92Q6UXU6 159 aa13.51□□□□□ -0.25
FOCAD-210ENST00000603844 RIMBP2O15034 1052 aa13.48□□□□□ -0.25
FOCAD-210ENST00000603844 TAOK2Q9UL54 1235 aa13.48□□□□□ -0.25
FOCAD-210ENST00000603844 ERBB3P21860 1342 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms