RNA–Protein interactions for RNA: ENST00000603648.1

FOCAD-208, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-208ENST00000603648 SLC39A7Q92504 469 aa13.74□□□□□ -0.21
FOCAD-208ENST00000603648 C7P10643 843 aa13.72□□□□□ -0.21
FOCAD-208ENST00000603648 ASTLQ6HA08 431 aaPredicted RBP13.69□□□□□ -0.22
FOCAD-208ENST00000603648 SCUBE2Q9NQ36 999 aa13.68□□□□□ -0.22
FOCAD-208ENST00000603648 ATMINO43313 823 aaPredicted RBP13.66□□□□□ -0.22
FOCAD-208ENST00000603648 STAG3Q9UJ98 1225 aa13.66□□□□□ -0.22
FOCAD-208ENST00000603648 MS4A3Q96HJ5 214 aa13.63□□□□□ -0.23
FOCAD-208ENST00000603648 NPM1P06748 294 aaKnown RBP eCLIP13.6□□□□□ -0.23
FOCAD-208ENST00000603648 CDAN1Q8IWY9 1227 aa13.57□□□□□ -0.24
FOCAD-208ENST00000603648 ATN1P54259 1190 aaPredicted RBP13.48□□□□□ -0.25
FOCAD-208ENST00000603648 MNX1P50219 401 aaPredicted RBP13.44□□□□□ -0.26
FOCAD-208ENST00000603648 POTEFA5A3E0 1075 aa13.4□□□□□ -0.26
FOCAD-208ENST00000603648 TSPYL2Q9H2G4 693 aaPredicted RBP13.35□□□□□ -0.27
FOCAD-208ENST00000603648 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
FOCAD-208ENST00000603648 MMRN1Q13201 1228 aa13.31□□□□□ -0.28
FOCAD-208ENST00000603648 SEC24BO95487 1268 aa13.3□□□□□ -0.28
FOCAD-208ENST00000603648 ST18O60284 1047 aa13.27□□□□□ -0.29
FOCAD-208ENST00000603648 TRPC6Q9Y210 931 aa13.26□□□□□ -0.29
FOCAD-208ENST00000603648 COLQQ9Y215 455 aaPredicted RBP13.26□□□□□ -0.29
FOCAD-208ENST00000603648 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
FOCAD-208ENST00000603648 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
FOCAD-208ENST00000603648 KIF12Q96FN5 646 aa13.25□□□□□ -0.29
FOCAD-208ENST00000603648 SPNS2Q8IVW8 549 aa13.24□□□□□ -0.29
FOCAD-208ENST00000603648 TIE1P35590 1138 aa13.21□□□□□ -0.29
FOCAD-208ENST00000603648 SLAIN1Q8ND83 568 aa13.21□□□□□ -0.29
FOCAD-208ENST00000603648 MAP3K13O43283 966 aa13.14□□□□□ -0.31
FOCAD-208ENST00000603648 TTLL13PA6NNM8 815 aa13.12□□□□□ -0.31
FOCAD-208ENST00000603648 IER5LQ5T953 404 aa13.07□□□□□ -0.32
FOCAD-208ENST00000603648 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
FOCAD-208ENST00000603648 TMEM121BQ9BXQ6 578 aaPredicted RBP13.03□□□□□ -0.32
FOCAD-208ENST00000603648 MARVELD3Q96A59 401 aa12.99□□□□□ -0.33
FOCAD-208ENST00000603648 PLCG2P16885 1265 aa12.95□□□□□ -0.34
FOCAD-208ENST00000603648 SNPHO15079 494 aa12.93□□□□□ -0.34
FOCAD-208ENST00000603648 RASEFQ8IZ41 740 aa12.93□□□□□ -0.34
FOCAD-208ENST00000603648 PCDHB13Q9Y5F0 798 aa12.91□□□□□ -0.34
FOCAD-208ENST00000603648 PLEKHG5O94827 1062 aa12.86□□□□□ -0.35
FOCAD-208ENST00000603648 SGIP1Q9BQI5 828 aa12.86□□□□□ -0.35
FOCAD-208ENST00000603648 TMEM106CQ9BVX2 250 aa12.84□□□□□ -0.35
FOCAD-208ENST00000603648 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.83□□□□□ -0.36
FOCAD-208ENST00000603648 EMP3P54852 163 aa12.82□□□□□ -0.36
FOCAD-208ENST00000603648 IRX5P78411 483 aaPredicted RBP12.8□□□□□ -0.36
FOCAD-208ENST00000603648 MIER1Q8N108 512 aa12.79□□□□□ -0.36
FOCAD-208ENST00000603648 IFNL1Q8IU54 200 aa12.78□□□□□ -0.36
FOCAD-208ENST00000603648 KRTAP3-3Q9BYR6 98 aa12.77□□□□□ -0.37
FOCAD-208ENST00000603648 KRTAP3-2Q9BYR7 98 aa12.77□□□□□ -0.37
FOCAD-208ENST00000603648 OCEL1Q9H607 264 aa12.75□□□□□ -0.37
FOCAD-208ENST00000603648 HS3ST6Q96QI5 342 aa12.73□□□□□ -0.37
FOCAD-208ENST00000603648 FAM205CA6NFA0 338 aa12.71□□□□□ -0.37
FOCAD-208ENST00000603648 POTEB3A0JP26 581 aa12.69□□□□□ -0.38
FOCAD-208ENST00000603648 FKBP8Q14318 412 aa12.69□□□□□ -0.38
FOCAD-208ENST00000603648 POTEBQ6S5H4 581 aa12.69□□□□□ -0.38
FOCAD-208ENST00000603648 PROM2Q8N271 834 aa12.68□□□□□ -0.38
FOCAD-208ENST00000603648 C3orf67Q6ZVT6 689 aa12.62□□□□□ -0.39
FOCAD-208ENST00000603648 PLCD3Q8N3E9 789 aa12.59□□□□□ -0.39
FOCAD-208ENST00000603648 NUBP1P53384 320 aa12.56□□□□□ -0.4
FOCAD-208ENST00000603648 RNF166Q96A37 237 aaPredicted RBP12.55□□□□□ -0.4
FOCAD-208ENST00000603648 FAM212AQ96EL1 285 aa12.54□□□□□ -0.4
FOCAD-208ENST00000603648 ZBTB47Q9UFB7 747 aaPredicted RBP12.51□□□□□ -0.41
FOCAD-208ENST00000603648 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
FOCAD-208ENST00000603648 PDCD7Q8N8D1 485 aaKnown RBP12.47□□□□□ -0.41
FOCAD-208ENST00000603648 PCDHB8Q9UN66 801 aa12.43□□□□□ -0.42
FOCAD-208ENST00000603648 MYT1LQ9UL68 1186 aa12.42□□□□□ -0.42
FOCAD-208ENST00000603648 PYGBP11216 843 aa12.41□□□□□ -0.42
FOCAD-208ENST00000603648 GOLGA2Q08379 1002 aa12.4□□□□□ -0.42
FOCAD-208ENST00000603648 MKRN3Q13064 507 aaKnown RBP12.38□□□□□ -0.43
FOCAD-208ENST00000603648 ERBB3P21860 1342 aa12.37□□□□□ -0.43
FOCAD-208ENST00000603648 DCAF8Q5TAQ9 597 aa12.35□□□□□ -0.43
FOCAD-208ENST00000603648 ZNF710Q8N1W2 664 aa12.34□□□□□ -0.43
FOCAD-208ENST00000603648 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.33□□□□□ -0.445e-6■■□□□ 12.9
FOCAD-208ENST00000603648 HOXB1P14653 301 aaPredicted RBP12.32□□□□□ -0.44
FOCAD-208ENST00000603648 HOXB3P14651 431 aaPredicted RBP12.31□□□□□ -0.44
FOCAD-208ENST00000603648 VARS2Q5ST30 1063 aaKnown RBP12.26□□□□□ -0.45
FOCAD-208ENST00000603648 G3V3G9 751 aa12.23□□□□□ -0.45
FOCAD-208ENST00000603648 DOK7Q18PE1 504 aa12.23□□□□□ -0.45
FOCAD-208ENST00000603648 FBXO3Q9UK99 471 aa12.23□□□□□ -0.45
FOCAD-208ENST00000603648 DPY19L2Q6NUT2 758 aa12.2□□□□□ -0.46
FOCAD-208ENST00000603648 PTGER2P43116 358 aa12.19□□□□□ -0.46
FOCAD-208ENST00000603648 ZNF467Q7Z7K2 595 aaPredicted RBP12.18□□□□□ -0.46
FOCAD-208ENST00000603648 RIMBP2O15034 1052 aa12.16□□□□□ -0.46
FOCAD-208ENST00000603648 BOLA1Q9Y3E2 137 aa12.16□□□□□ -0.46
FOCAD-208ENST00000603648 ZNF687Q8N1G0 1237 aa12.15□□□□□ -0.46
FOCAD-208ENST00000603648 PSEN1P49768 467 aa12.12□□□□□ -0.47
FOCAD-208ENST00000603648 ANKRD13DQ6ZTN6 518 aa12.11□□□□□ -0.47
FOCAD-208ENST00000603648 ILDR1Q86SU0 546 aaPredicted RBP12.11□□□□□ -0.47
FOCAD-208ENST00000603648 PLA2G2EQ9NZK7 142 aa12.08□□□□□ -0.48
FOCAD-208ENST00000603648 VASPP50552 380 aaPredicted RBP12.06□□□□□ -0.48
FOCAD-208ENST00000603648 GSE1Q14687 1217 aa12□□□□□ -0.49
FOCAD-208ENST00000603648 ZSWIM6Q9HCJ5 1215 aa12□□□□□ -0.49
FOCAD-208ENST00000603648 CABP2Q9NPB3 220 aa12□□□□□ -0.49
FOCAD-208ENST00000603648 PDAP1Q13442 181 aaKnown RBP11.96□□□□□ -0.49
FOCAD-208ENST00000603648 GPR153Q6NV75 609 aa11.95□□□□□ -0.5
FOCAD-208ENST00000603648 CHRM1P11229 460 aaPredicted RBP11.94□□□□□ -0.5
FOCAD-208ENST00000603648 LSM11P83369 360 aaKnown RBP eCLIP11.94□□□□□ -0.5
FOCAD-208ENST00000603648 IFNLR1Q8IU57 520 aaPredicted RBP11.9□□□□□ -0.5
FOCAD-208ENST00000603648 HCSTQ9UBK5 93 aa11.9□□□□□ -0.5
FOCAD-208ENST00000603648 ARSIQ5FYB1 569 aa11.87□□□□□ -0.51
FOCAD-208ENST00000603648 TMEM92Q6UXU6 159 aa11.85□□□□□ -0.51
FOCAD-208ENST00000603648 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
FOCAD-208ENST00000603648 ZNF316A6NFI3 1004 aaPredicted RBP11.84□□□□□ -0.51
FOCAD-208ENST00000603648 AMER1Q5JTC6 1135 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms