RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.33
LINC00343-209ENST00000601607 KLHL34Q8N239 644 aa17.11■□□□□ 0.33
LINC00343-209ENST00000601607 IFNLR1Q8IU57 520 aaPredicted RBP17.09■□□□□ 0.33
LINC00343-209ENST00000601607 TSPYL2Q9H2G4 693 aaPredicted RBP17.07■□□□□ 0.32
LINC00343-209ENST00000601607 CCDC61Q9Y6R9 512 aa17.01■□□□□ 0.31
LINC00343-209ENST00000601607 MS4A3Q96HJ5 214 aa16.99■□□□□ 0.31
LINC00343-209ENST00000601607 NUBP1P53384 320 aa16.93■□□□□ 0.3
LINC00343-209ENST00000601607 SPOCK2Q92563 424 aa16.92■□□□□ 0.3
LINC00343-209ENST00000601607 ASTLQ6HA08 431 aaPredicted RBP16.91■□□□□ 0.3
LINC00343-209ENST00000601607 RASEFQ8IZ41 740 aa16.91■□□□□ 0.3
LINC00343-209ENST00000601607 KIF12Q96FN5 646 aa16.9■□□□□ 0.3
LINC00343-209ENST00000601607 ATMINO43313 823 aaPredicted RBP16.85■□□□□ 0.29
LINC00343-209ENST00000601607 SLC39A7Q92504 469 aa16.82■□□□□ 0.28
LINC00343-209ENST00000601607 PELP1Q8IZL8 1130 aaKnown RBP16.81■□□□□ 0.28
LINC00343-209ENST00000601607 FAM212AQ96EL1 285 aa16.81■□□□□ 0.28
LINC00343-209ENST00000601607 C7P10643 843 aa16.8■□□□□ 0.28
LINC00343-209ENST00000601607 MAP3K13O43283 966 aa16.78■□□□□ 0.28
LINC00343-209ENST00000601607 DCAF8Q5TAQ9 597 aa16.78■□□□□ 0.28
LINC00343-209ENST00000601607 METRNQ9UJH8 293 aa16.78■□□□□ 0.28
LINC00343-209ENST00000601607 SGIP1Q9BQI5 828 aa16.76■□□□□ 0.27
LINC00343-209ENST00000601607 TIE1P35590 1138 aa16.73■□□□□ 0.27
LINC00343-209ENST00000601607 CIZ1Q9ULV3 898 aaPredicted RBP16.71■□□□□ 0.27
LINC00343-209ENST00000601607 ATN1P54259 1190 aaPredicted RBP16.7■□□□□ 0.26
LINC00343-209ENST00000601607 GSE1Q14687 1217 aa16.7■□□□□ 0.26
LINC00343-209ENST00000601607 POTEB2H3BUK9 544 aa16.69■□□□□ 0.26
LINC00343-209ENST00000601607 BMP2KQ9NSY1 1161 aaPredicted RBP16.69■□□□□ 0.26
LINC00343-209ENST00000601607 OTUD5Q96G74 571 aa16.68■□□□□ 0.26
LINC00343-209ENST00000601607 ABCC9O60706 1549 aa16.66■□□□□ 0.26
LINC00343-209ENST00000601607 PCDHB13Q9Y5F0 798 aa16.66■□□□□ 0.26
LINC00343-209ENST00000601607 TRPC6Q9Y210 931 aa16.63■□□□□ 0.25
LINC00343-209ENST00000601607 MAMSTRQ6ZN01 415 aa16.61■□□□□ 0.25
LINC00343-209ENST00000601607 TTLL13PA6NNM8 815 aa16.59■□□□□ 0.25
LINC00343-209ENST00000601607 PYGBP11216 843 aa16.58■□□□□ 0.24
LINC00343-209ENST00000601607 IFNL1Q8IU54 200 aa16.53■□□□□ 0.24
LINC00343-209ENST00000601607 IER5LQ5T953 404 aa16.51■□□□□ 0.23
LINC00343-209ENST00000601607 SCUBE2Q9NQ36 999 aa16.5■□□□□ 0.23
LINC00343-209ENST00000601607 TRIM35Q9UPQ4 493 aa16.49■□□□□ 0.23
LINC00343-209ENST00000601607 SEC24BO95487 1268 aa16.48■□□□□ 0.23
LINC00343-209ENST00000601607 TRIM41Q8WV44 630 aa16.48■□□□□ 0.23
LINC00343-209ENST00000601607 CHRM1P11229 460 aaPredicted RBP16.47■□□□□ 0.23
LINC00343-209ENST00000601607 POTEJP0CG39 1038 aa16.46■□□□□ 0.23
LINC00343-209ENST00000601607 PKD2Q13563 968 aa16.46■□□□□ 0.23
LINC00343-209ENST00000601607 TMEM106CQ9BVX2 250 aa16.44■□□□□ 0.22
LINC00343-209ENST00000601607 POTEFA5A3E0 1075 aa16.43■□□□□ 0.22
LINC00343-209ENST00000601607 ECM2O94769 699 aaPredicted RBP16.41■□□□□ 0.22
LINC00343-209ENST00000601607 PCDHB8Q9UN66 801 aa16.37■□□□□ 0.21
LINC00343-209ENST00000601607 COLQQ9Y215 455 aaPredicted RBP16.37■□□□□ 0.21
LINC00343-209ENST00000601607 ZNF467Q7Z7K2 595 aaPredicted RBP16.34■□□□□ 0.21
LINC00343-209ENST00000601607 AMER1Q5JTC6 1135 aaPredicted RBP16.32■□□□□ 0.2
LINC00343-209ENST00000601607 PLCG2P16885 1265 aa16.3■□□□□ 0.2
LINC00343-209ENST00000601607 RNF25Q96BH1 459 aaPredicted RBP16.29■□□□□ 0.2
LINC00343-209ENST00000601607 RTN4Q9NQC3 1192 aaKnown RBP16.29■□□□□ 0.2
LINC00343-209ENST00000601607 RIOK3O14730 519 aaKnown RBP16.25■□□□□ 0.19
LINC00343-209ENST00000601607 RGL2O15211 777 aa16.25■□□□□ 0.19
LINC00343-209ENST00000601607 POTEMA6NI47 508 aa16.24■□□□□ 0.19
LINC00343-209ENST00000601607 IRX5P78411 483 aaPredicted RBP16.23■□□□□ 0.19
LINC00343-209ENST00000601607 POTEGQ6S5H5 508 aa16.2■□□□□ 0.18
LINC00343-209ENST00000601607 OCEL1Q9H607 264 aa16.2■□□□□ 0.18
LINC00343-209ENST00000601607 PDAP1Q13442 181 aaKnown RBP16.19■□□□□ 0.18
LINC00343-209ENST00000601607 PSEN1P49768 467 aa16.18■□□□□ 0.18
LINC00343-209ENST00000601607 GOLGA2Q08379 1002 aa16.15■□□□□ 0.18
LINC00343-209ENST00000601607 VGFO15240 615 aaPredicted RBP16.14■□□□□ 0.17
LINC00343-209ENST00000601607 FAM163AQ96GL9 167 aaPredicted RBP16.13■□□□□ 0.17
LINC00343-209ENST00000601607 PCDH10Q9P2E7 1040 aa16.12■□□□□ 0.17
LINC00343-209ENST00000601607 TAOK2Q9UL54 1235 aa16.11■□□□□ 0.17
LINC00343-209ENST00000601607 MKRN3Q13064 507 aaKnown RBP16.1■□□□□ 0.17
LINC00343-209ENST00000601607 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.09■□□□□ 0.17
LINC00343-209ENST00000601607 SLAIN1Q8ND83 568 aa16.09■□□□□ 0.17
LINC00343-209ENST00000601607 ZFP91Q96JP5 570 aaPredicted RBP16.09■□□□□ 0.17
LINC00343-209ENST00000601607 LCE2DQ5TA82 110 aaPredicted RBP16.06■□□□□ 0.16
LINC00343-209ENST00000601607 PLSCR2Q9NRY7 297 aa16.06■□□□□ 0.16
LINC00343-209ENST00000601607 DCAF8L2P0C7V8 631 aa16.04■□□□□ 0.16
LINC00343-209ENST00000601607 STK25O00506 426 aa16■□□□□ 0.15
LINC00343-209ENST00000601607 EIF2AK3Q9NZJ5 1116 aaKnown RBP16■□□□□ 0.15
LINC00343-209ENST00000601607 PDCD7Q8N8D1 485 aaKnown RBP15.99■□□□□ 0.15
LINC00343-209ENST00000601607 BCL11BQ9C0K0 894 aaPredicted RBP15.99■□□□□ 0.15
LINC00343-209ENST00000601607 CABP2Q9NPB3 220 aa15.99■□□□□ 0.15
LINC00343-209ENST00000601607 L3MBTL3Q96JM7 780 aaPredicted RBP15.97■□□□□ 0.15
LINC00343-209ENST00000601607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.97■□□□□ 0.15
LINC00343-209ENST00000601607 CCDC180Q9P1Z9 1646 aa15.97■□□□□ 0.15
LINC00343-209ENST00000601607 STK24Q9Y6E0 443 aa15.96■□□□□ 0.15
LINC00343-209ENST00000601607 CHGAP10645 457 aaKnown RBP15.93■□□□□ 0.14
LINC00343-209ENST00000601607 C3orf67Q6ZVT6 689 aa15.92■□□□□ 0.14
LINC00343-209ENST00000601607 SNPHO15079 494 aa15.91■□□□□ 0.14
LINC00343-209ENST00000601607 HS6ST3Q8IZP7 471 aa15.89■□□□□ 0.13
LINC00343-209ENST00000601607 ILDR1Q86SU0 546 aaPredicted RBP15.88■□□□□ 0.13
LINC00343-209ENST00000601607 EFCAB3Q8N7B9 438 aa15.88■□□□□ 0.13
LINC00343-209ENST00000601607 ST18O60284 1047 aa15.85■□□□□ 0.13
LINC00343-209ENST00000601607 TMEM121BQ9BXQ6 578 aaPredicted RBP15.83■□□□□ 0.12
LINC00343-209ENST00000601607 G3V3G9 751 aa15.8■□□□□ 0.12
LINC00343-209ENST00000601607 SOX12O15370 315 aa15.77■□□□□ 0.12
LINC00343-209ENST00000601607 PHF8Q9UPP1 1060 aa15.74■□□□□ 0.11
LINC00343-209ENST00000601607 CDAN1Q8IWY9 1227 aa15.73■□□□□ 0.11
LINC00343-209ENST00000601607 BOLA1Q9Y3E2 137 aa15.73■□□□□ 0.11
LINC00343-209ENST00000601607 DPY19L2Q6NUT2 758 aa15.7■□□□□ 0.1
LINC00343-209ENST00000601607 MFRPQ9BY79 579 aa15.7■□□□□ 0.1
LINC00343-209ENST00000601607 NLRP6P59044 892 aa15.69■□□□□ 0.1
LINC00343-209ENST00000601607 DNAJC5Q9H3Z4 198 aa15.69■□□□□ 0.1
LINC00343-209ENST00000601607 NKX1-1Q15270 411 aaPredicted RBP15.68■□□□□ 0.1
LINC00343-209ENST00000601607 FBXO22Q8NEZ5 403 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms