RNA–Protein interactions for RNA: ENST00000601133.5

FARP1-233, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-233	ENST00000601133	TSPYL2	Q9H2G4	693 aa	Predicted RBP	14	□□□□□ -0.17
FARP1-233	ENST00000601133	DCBLD2	Q96PD2	775 aa		13.97	□□□□□ -0.17
FARP1-233	ENST00000601133	LHX8	Q68G74	356 aa		13.95	□□□□□ -0.18
FARP1-233	ENST00000601133	RASEF	Q8IZ41	740 aa		13.94	□□□□□ -0.18
FARP1-233	ENST00000601133	PLCD3	Q8N3E9	789 aa		13.94	□□□□□ -0.18
FARP1-233	ENST00000601133	CCDC61	Q9Y6R9	512 aa		13.92	□□□□□ -0.18
FARP1-233	ENST00000601133	MS4A3	Q96HJ5	214 aa		13.91	□□□□□ -0.18
FARP1-233	ENST00000601133	PLEKHG5	O94827	1062 aa		13.89	□□□□□ -0.19
FARP1-233	ENST00000601133	DCAF8L2	P0C7V8	631 aa		13.85	□□□□□ -0.19
FARP1-233	ENST00000601133	PKD2	Q13563	968 aa		13.85	□□□□□ -0.19
FARP1-233	ENST00000601133	PELP1	Q8IZL8	1130 aa	Known RBP	13.85	□□□□□ -0.19
FARP1-233	ENST00000601133	KIF12	Q96FN5	646 aa		13.83	□□□□□ -0.2
FARP1-233	ENST00000601133	NUBP1	P53384	320 aa		13.82	□□□□□ -0.2
FARP1-233	ENST00000601133	PLCB2	Q00722	1185 aa		13.82	□□□□□ -0.2
FARP1-233	ENST00000601133	TRPC6	Q9Y210	931 aa		13.78	□□□□□ -0.2
FARP1-233	ENST00000601133	MAP3K13	O43283	966 aa		13.76	□□□□□ -0.21
FARP1-233	ENST00000601133	POTEB2	H3BUK9	544 aa		13.74	□□□□□ -0.21
FARP1-233	ENST00000601133	ATMIN	O43313	823 aa	Predicted RBP	13.74	□□□□□ -0.21
FARP1-233	ENST00000601133	ASTL	Q6HA08	431 aa	Predicted RBP	13.74	□□□□□ -0.21
FARP1-233	ENST00000601133	KLHL34	Q8N239	644 aa		13.74	□□□□□ -0.21
FARP1-233	ENST00000601133	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.72	□□□□□ -0.21
FARP1-233	ENST00000601133	SPOCK2	Q92563	424 aa		13.71	□□□□□ -0.21
FARP1-233	ENST00000601133	ATN1	P54259	1190 aa	Predicted RBP	13.67	□□□□□ -0.22
FARP1-233	ENST00000601133	HAP1	P54257	671 aa	Predicted RBP	13.66	□□□□□ -0.22
FARP1-233	ENST00000601133	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.66	□□□□□ -0.22
FARP1-233	ENST00000601133	METRN	Q9UJH8	293 aa		13.63	□□□□□ -0.23
FARP1-233	ENST00000601133	ECM2	O94769	699 aa	Predicted RBP	13.62	□□□□□ -0.23
FARP1-233	ENST00000601133	FAM212A	Q96EL1	285 aa		13.62	□□□□□ -0.23
FARP1-233	ENST00000601133	OTUD5	Q96G74	571 aa		13.6	□□□□□ -0.23
FARP1-233	ENST00000601133	PCDHB13	Q9Y5F0	798 aa		13.6	□□□□□ -0.23
FARP1-233	ENST00000601133	POTEJ	P0CG39	1038 aa		13.58	□□□□□ -0.24
FARP1-233	ENST00000601133	IFNL1	Q8IU54	200 aa		13.58	□□□□□ -0.24
FARP1-233	ENST00000601133	SLC39A7	Q92504	469 aa		13.58	□□□□□ -0.24
FARP1-233	ENST00000601133	TIE1	P35590	1138 aa		13.57	□□□□□ -0.24
FARP1-233	ENST00000601133	DCAF8	Q5TAQ9	597 aa		13.57	□□□□□ -0.24
FARP1-233	ENST00000601133	TTLL13P	A6NNM8	815 aa		13.56	□□□□□ -0.24
FARP1-233	ENST00000601133	C7	P10643	843 aa		13.56	□□□□□ -0.24
FARP1-233	ENST00000601133	POTEF	A5A3E0	1075 aa		13.55	□□□□□ -0.24
FARP1-233	ENST00000601133	SGIP1	Q9BQI5	828 aa		13.54	□□□□□ -0.24
FARP1-233	ENST00000601133	PYGB	P11216	843 aa		13.53	□□□□□ -0.24
FARP1-233	ENST00000601133	RGL2	O15211	777 aa		13.51	□□□□□ -0.25
FARP1-233	ENST00000601133	TRIM35	Q9UPQ4	493 aa		13.46	□□□□□ -0.25
FARP1-233	ENST00000601133	COLQ	Q9Y215	455 aa	Predicted RBP	13.46	□□□□□ -0.25
FARP1-233	ENST00000601133	BBX	Q8WY36	941 aa	Predicted RBP	13.45	□□□□□ -0.26
FARP1-233	ENST00000601133	PCDHB8	Q9UN66	801 aa		13.45	□□□□□ -0.26
FARP1-233	ENST00000601133	TMEM106C	Q9BVX2	250 aa		13.43	□□□□□ -0.26
FARP1-233	ENST00000601133	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.42	□□□□□ -0.26
FARP1-233	ENST00000601133	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.41	□□□□□ -0.26
FARP1-233	ENST00000601133	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.4	□□□□□ -0.26
FARP1-233	ENST00000601133	CFAP44	Q96MT7	982 aa		13.38	□□□□□ -0.27
FARP1-233	ENST00000601133	CCDC180	Q9P1Z9	1646 aa		13.38	□□□□□ -0.27
FARP1-233	ENST00000601133	GSE1	Q14687	1217 aa		13.37	□□□□□ -0.27
FARP1-233	ENST00000601133	VSIG10	Q8N0Z9	540 aa		13.37	□□□□□ -0.27
FARP1-233	ENST00000601133	ABCC9	O60706	1549 aa		13.35	□□□□□ -0.27
FARP1-233	ENST00000601133	SEC24B	O95487	1268 aa		13.33	□□□□□ -0.28
FARP1-233	ENST00000601133	IER5L	Q5T953	404 aa		13.32	□□□□□ -0.28
FARP1-233	ENST00000601133	KDM2A	Q9Y2K7	1162 aa		13.32	□□□□□ -0.28
FARP1-233	ENST00000601133	CHRM1	P11229	460 aa	Predicted RBP	13.29	□□□□□ -0.28
FARP1-233	ENST00000601133	CHGA	P10645	457 aa	Known RBP	13.28	□□□□□ -0.28
FARP1-233	ENST00000601133	BCAN	Q96GW7	911 aa		13.28	□□□□□ -0.28
FARP1-233	ENST00000601133	IRX5	P78411	483 aa	Predicted RBP	13.27	□□□□□ -0.29
FARP1-233	ENST00000601133	MAMSTR	Q6ZN01	415 aa		13.27	□□□□□ -0.29
FARP1-233	ENST00000601133	SCUBE2	Q9NQ36	999 aa		13.25	□□□□□ -0.29
FARP1-233	ENST00000601133	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.23	□□□□□ -0.29
FARP1-233	ENST00000601133	SPRYD3	Q8NCJ5	442 aa		13.23	□□□□□ -0.29
FARP1-233	ENST00000601133	RNF25	Q96BH1	459 aa	Predicted RBP	13.22	□□□□□ -0.29
FARP1-233	ENST00000601133	TSHZ2	Q9NRE2	1034 aa		13.21	□□□□□ -0.29
FARP1-233	ENST00000601133	PLCG2	P16885	1265 aa		13.2	□□□□□ -0.3
FARP1-233	ENST00000601133	LCE2D	Q5TA82	110 aa	Predicted RBP	13.19	□□□□□ -0.3
FARP1-233	ENST00000601133	TRIM41	Q8WV44	630 aa		13.19	□□□□□ -0.3
FARP1-233	ENST00000601133	PRKCSH	P14314	528 aa	Predicted RBP	13.18	□□□□□ -0.3
FARP1-233	ENST00000601133	PSEN1	P49768	467 aa		13.18	□□□□□ -0.3
FARP1-233	ENST00000601133	OCEL1	Q9H607	264 aa		13.16	□□□□□ -0.3
FARP1-233	ENST00000601133	HS6ST3	Q8IZP7	471 aa		13.15	□□□□□ -0.3
FARP1-233	ENST00000601133	POTEM	A6NI47	508 aa		13.12	□□□□□ -0.31
FARP1-233	ENST00000601133	TAOK2	Q9UL54	1235 aa		13.12	□□□□□ -0.31
FARP1-233	ENST00000601133	POTEG	Q6S5H5	508 aa		13.11	□□□□□ -0.31
FARP1-233	ENST00000601133	PDCD7	Q8N8D1	485 aa	Known RBP	13.11	□□□□□ -0.31
FARP1-233	ENST00000601133	FAM163A	Q96GL9	167 aa	Predicted RBP	13.11	□□□□□ -0.31
FARP1-233	ENST00000601133	PDAP1	Q13442	181 aa	Known RBP	13.1	□□□□□ -0.31
FARP1-233	ENST00000601133	SLAIN1	Q8ND83	568 aa		13.07	□□□□□ -0.32
FARP1-233	ENST00000601133	MKRN3	Q13064	507 aa	Known RBP	13.06	□□□□□ -0.32
FARP1-233	ENST00000601133	GOLGA2	Q08379	1002 aa		13.05	□□□□□ -0.32
FARP1-233	ENST00000601133	RIOK3	O14730	519 aa	Known RBP	13.04	□□□□□ -0.32
FARP1-233	ENST00000601133	CABP2	Q9NPB3	220 aa		13.04	□□□□□ -0.32
FARP1-233	ENST00000601133	NKX1-1	Q15270	411 aa	Predicted RBP	13.03	□□□□□ -0.32
FARP1-233	ENST00000601133	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.03	□□□□□ -0.32
FARP1-233	ENST00000601133	DPY19L2	Q6NUT2	758 aa		13.01	□□□□□ -0.33
FARP1-233	ENST00000601133	ILDR1	Q86SU0	546 aa	Predicted RBP	13	□□□□□ -0.33
FARP1-233	ENST00000601133	DNAJC5	Q9H3Z4	198 aa		13	□□□□□ -0.33
FARP1-233	ENST00000601133	TPRN	Q4KMQ1	711 aa		12.98	□□□□□ -0.33
FARP1-233	ENST00000601133	STK25	O00506	426 aa		12.95	□□□□□ -0.34
FARP1-233	ENST00000601133	PLSCR2	Q9NRY7	297 aa		12.94	□□□□□ -0.34
FARP1-233	ENST00000601133	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.94	□□□□□ -0.34
FARP1-233	ENST00000601133	VGF	O15240	615 aa	Predicted RBP	12.93	□□□□□ -0.34
FARP1-233	ENST00000601133	GTPBP6	O43824	516 aa	Predicted RBP	12.92	□□□□□ -0.34
FARP1-233	ENST00000601133	ST18	O60284	1047 aa		12.92	□□□□□ -0.34
FARP1-233	ENST00000601133	EFCAB3	Q8N7B9	438 aa		12.92	□□□□□ -0.34
FARP1-233	ENST00000601133	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.9	□□□□□ -0.34
FARP1-233	ENST00000601133	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.89	□□□□□ -0.35

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