RNA–Protein interactions for RNA: ENST00000597477.5

PIK3C3-216, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 2

Gene PIK3C3, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-216ENST00000597477 CCDC61Q9Y6R9 512 aa13.6□□□□□ -0.23
PIK3C3-216ENST00000597477 METRNQ9UJH8 293 aa13.58□□□□□ -0.24
PIK3C3-216ENST00000597477 PLSCR2Q9NRY7 297 aa13.54□□□□□ -0.24
PIK3C3-216ENST00000597477 TSPYL2Q9H2G4 693 aaPredicted RBP13.52□□□□□ -0.25
PIK3C3-216ENST00000597477 SLC39A7Q92504 469 aa13.51□□□□□ -0.25
PIK3C3-216ENST00000597477 KIF12Q96FN5 646 aa13.51□□□□□ -0.25
PIK3C3-216ENST00000597477 TRPC6Q9Y210 931 aa13.51□□□□□ -0.25
PIK3C3-216ENST00000597477 POTEFA5A3E0 1075 aa13.5□□□□□ -0.25
PIK3C3-216ENST00000597477 ATN1P54259 1190 aaPredicted RBP13.5□□□□□ -0.25
PIK3C3-216ENST00000597477 POTEMA6NI47 508 aa13.49□□□□□ -0.25
PIK3C3-216ENST00000597477 C7P10643 843 aa13.49□□□□□ -0.25
PIK3C3-216ENST00000597477 LCE2DQ5TA82 110 aaPredicted RBP13.49□□□□□ -0.25
PIK3C3-216ENST00000597477 POTEGQ6S5H5 508 aa13.45□□□□□ -0.26
PIK3C3-216ENST00000597477 RASEFQ8IZ41 740 aa13.44□□□□□ -0.26
PIK3C3-216ENST00000597477 BMP2KQ9NSY1 1161 aaPredicted RBP13.44□□□□□ -0.26
PIK3C3-216ENST00000597477 MAP3K13O43283 966 aa13.39□□□□□ -0.27
PIK3C3-216ENST00000597477 TIE1P35590 1138 aa13.33□□□□□ -0.28
PIK3C3-216ENST00000597477 MAMSTRQ6ZN01 415 aa13.31□□□□□ -0.28
PIK3C3-216ENST00000597477 COLQQ9Y215 455 aaPredicted RBP13.3□□□□□ -0.28
PIK3C3-216ENST00000597477 TTLL13PA6NNM8 815 aa13.29□□□□□ -0.28
PIK3C3-216ENST00000597477 MIER1Q8N108 512 aa13.29□□□□□ -0.28
PIK3C3-216ENST00000597477 NUBP1P53384 320 aa13.25□□□□□ -0.29
PIK3C3-216ENST00000597477 SCUBE2Q9NQ36 999 aa13.24□□□□□ -0.29
PIK3C3-216ENST00000597477 PCDH10Q9P2E7 1040 aa13.2□□□□□ -0.3
PIK3C3-216ENST00000597477 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
PIK3C3-216ENST00000597477 SGIP1Q9BQI5 828 aa13.18□□□□□ -0.3
PIK3C3-216ENST00000597477 PLEKHG5O94827 1062 aa13.17□□□□□ -0.3
PIK3C3-216ENST00000597477 TRIM35Q9UPQ4 493 aa13.17□□□□□ -0.3
PIK3C3-216ENST00000597477 IFNL1Q8IU54 200 aa13.16□□□□□ -0.3
PIK3C3-216ENST00000597477 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.3
PIK3C3-216ENST00000597477 IER5LQ5T953 404 aa13.13□□□□□ -0.31
PIK3C3-216ENST00000597477 PLCD3Q8N3E9 789 aa13.13□□□□□ -0.31
PIK3C3-216ENST00000597477 SEC24BO95487 1268 aa13.08□□□□□ -0.32
PIK3C3-216ENST00000597477 IRX5P78411 483 aaPredicted RBP13.03□□□□□ -0.32
PIK3C3-216ENST00000597477 TMEM106CQ9BVX2 250 aa13.03□□□□□ -0.32
PIK3C3-216ENST00000597477 ZBTB47Q9UFB7 747 aaPredicted RBP13.02□□□□□ -0.33
PIK3C3-216ENST00000597477 FAM212AQ96EL1 285 aa13□□□□□ -0.33
PIK3C3-216ENST00000597477 FKBP8Q14318 412 aa12.98□□□□□ -0.33
PIK3C3-216ENST00000597477 ST18O60284 1047 aa12.96□□□□□ -0.33
PIK3C3-216ENST00000597477 SLAIN1Q8ND83 568 aa12.95□□□□□ -0.34
PIK3C3-216ENST00000597477 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
PIK3C3-216ENST00000597477 PYGBP11216 843 aa12.91□□□□□ -0.34
PIK3C3-216ENST00000597477 PLCG2P16885 1265 aa12.91□□□□□ -0.34
PIK3C3-216ENST00000597477 PCDHB8Q9UN66 801 aa12.88□□□□□ -0.35
PIK3C3-216ENST00000597477 OCEL1Q9H607 264 aa12.85□□□□□ -0.35
PIK3C3-216ENST00000597477 DCAF8Q5TAQ9 597 aa12.82□□□□□ -0.36
PIK3C3-216ENST00000597477 PDCD7Q8N8D1 485 aaKnown RBP12.82□□□□□ -0.36
PIK3C3-216ENST00000597477 TMEM121BQ9BXQ6 578 aaPredicted RBP12.73□□□□□ -0.37
PIK3C3-216ENST00000597477 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.7□□□□□ -0.38
PIK3C3-216ENST00000597477 FBXO3Q9UK99 471 aa12.7□□□□□ -0.38
PIK3C3-216ENST00000597477 VASPP50552 380 aaPredicted RBP12.69□□□□□ -0.38
PIK3C3-216ENST00000597477 ILDR1Q86SU0 546 aaPredicted RBP12.69□□□□□ -0.38
PIK3C3-216ENST00000597477 SPNS2Q8IVW8 549 aa12.68□□□□□ -0.38
PIK3C3-216ENST00000597477 MARVELD3Q96A59 401 aa12.68□□□□□ -0.38
PIK3C3-216ENST00000597477 CHRM1P11229 460 aaPredicted RBP12.67□□□□□ -0.38
PIK3C3-216ENST00000597477 MMRN1Q13201 1228 aa12.66□□□□□ -0.38
PIK3C3-216ENST00000597477 ZNF467Q7Z7K2 595 aaPredicted RBP12.66□□□□□ -0.38
PIK3C3-216ENST00000597477 POTEB3A0JP26 581 aa12.64□□□□□ -0.39
PIK3C3-216ENST00000597477 POTEBQ6S5H4 581 aa12.64□□□□□ -0.39
PIK3C3-216ENST00000597477 GSE1Q14687 1217 aa12.63□□□□□ -0.39
PIK3C3-216ENST00000597477 SNPHO15079 494 aa12.62□□□□□ -0.39
PIK3C3-216ENST00000597477 PSEN1P49768 467 aa12.6□□□□□ -0.39
PIK3C3-216ENST00000597477 MKRN3Q13064 507 aaKnown RBP12.57□□□□□ -0.4
PIK3C3-216ENST00000597477 DPY19L2Q6NUT2 758 aa12.57□□□□□ -0.4
PIK3C3-216ENST00000597477 KRTAP3-3Q9BYR6 98 aa12.57□□□□□ -0.4
PIK3C3-216ENST00000597477 KRTAP3-2Q9BYR7 98 aa12.57□□□□□ -0.4
PIK3C3-216ENST00000597477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.57□□□□□ -0.43e-7■■■■□ 20.2
PIK3C3-216ENST00000597477 KLHL34Q8N239 644 aa12.56□□□□□ -0.4
PIK3C3-216ENST00000597477 C3orf67Q6ZVT6 689 aa12.55□□□□□ -0.4
PIK3C3-216ENST00000597477 L3MBTL3Q96JM7 780 aaPredicted RBP12.55□□□□□ -0.4
PIK3C3-216ENST00000597477 IFNLR1Q8IU57 520 aaPredicted RBP12.51□□□□□ -0.41
PIK3C3-216ENST00000597477 EMP3P54852 163 aa12.5□□□□□ -0.41
PIK3C3-216ENST00000597477 PDAP1Q13442 181 aaKnown RBP12.5□□□□□ -0.41
PIK3C3-216ENST00000597477 HS3ST6Q96QI5 342 aa12.5□□□□□ -0.41
PIK3C3-216ENST00000597477 HOXB3P14651 431 aaPredicted RBP12.49□□□□□ -0.41
PIK3C3-216ENST00000597477 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
PIK3C3-216ENST00000597477 CABP2Q9NPB3 220 aa12.45□□□□□ -0.42
PIK3C3-216ENST00000597477 FAM205CA6NFA0 338 aa12.44□□□□□ -0.42
PIK3C3-216ENST00000597477 BOLA1Q9Y3E2 137 aa12.42□□□□□ -0.42
PIK3C3-216ENST00000597477 SPOCK2Q92563 424 aa12.4□□□□□ -0.42
PIK3C3-216ENST00000597477 HOXB1P14653 301 aaPredicted RBP12.34□□□□□ -0.43
PIK3C3-216ENST00000597477 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
PIK3C3-216ENST00000597477 TMEM92Q6UXU6 159 aa12.32□□□□□ -0.44
PIK3C3-216ENST00000597477 EFCAB3Q8N7B9 438 aa12.31□□□□□ -0.44
PIK3C3-216ENST00000597477 RNF25Q96BH1 459 aaPredicted RBP12.25□□□□□ -0.45
PIK3C3-216ENST00000597477 MS4A4AQ96JQ5 239 aa12.24□□□□□ -0.45
PIK3C3-216ENST00000597477 MICALL2Q8IY33 904 aa12.23□□□□□ -0.45
PIK3C3-216ENST00000597477 DOK7Q18PE1 504 aa12.21□□□□□ -0.45
PIK3C3-216ENST00000597477 G3V3G9 751 aa12.2□□□□□ -0.46
PIK3C3-216ENST00000597477 ZNF710Q8N1W2 664 aa12.19□□□□□ -0.46
PIK3C3-216ENST00000597477 ERBB3P21860 1342 aa12.17□□□□□ -0.46
PIK3C3-216ENST00000597477 GPR153Q6NV75 609 aa12.17□□□□□ -0.46
PIK3C3-216ENST00000597477 VARS2Q5ST30 1063 aaKnown RBP12.16□□□□□ -0.46
PIK3C3-216ENST00000597477 TRIM41Q8WV44 630 aa12.16□□□□□ -0.46
PIK3C3-216ENST00000597477 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.12□□□□□ -0.47
PIK3C3-216ENST00000597477 ZFP91Q96JP5 570 aaPredicted RBP12.12□□□□□ -0.47
PIK3C3-216ENST00000597477 ZSWIM6Q9HCJ5 1215 aa12.12□□□□□ -0.47
PIK3C3-216ENST00000597477 PHF8Q9UPP1 1060 aa12.12□□□□□ -0.47
PIK3C3-216ENST00000597477 SOX12O15370 315 aa12.1□□□□□ -0.47
PIK3C3-216ENST00000597477 RIOK3O14730 519 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms