RNA–Protein interactions for RNA: ENST00000597389.5

SPTBN4-211, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 5

Gene SPTBN4, Length 5,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-211ENST00000597389 ARID4BQ4LE39 1312 aaPredicted RBP26.6■■□□□ 1.85
SPTBN4-211ENST00000597389 HIRIP3Q9BW71 556 aaPredicted RBP26.59■■□□□ 1.85
SPTBN4-211ENST00000597389 RRP7BPQ9NSQ0 103 aa26.56■■□□□ 1.84
SPTBN4-211ENST00000597389 CDK11BP21127 795 aaKnown RBP26.51■■□□□ 1.83
SPTBN4-211ENST00000597389 NBR1Q14596 966 aa26.51■■□□□ 1.83
SPTBN4-211ENST00000597389 IRX6P78412 446 aaPredicted RBP26.51■■□□□ 1.83
SPTBN4-211ENST00000597389 RGL3Q3MIN7 710 aa26.47■■□□□ 1.83
SPTBN4-211ENST00000597389 PPM1GO15355 546 aaPredicted RBP26.42■■□□□ 1.82
SPTBN4-211ENST00000597389 PLEKHD1A6NEE1 506 aa26.4■■□□□ 1.82
SPTBN4-211ENST00000597389 GLIPR1L2Q4G1C9 344 aa26.4■■□□□ 1.82
SPTBN4-211ENST00000597389 DCAF1Q9Y4B6 1507 aa26.38■■□□□ 1.81
SPTBN4-211ENST00000597389 SENP3-EIF4A1A0A087X0R7 540 aa26.37■■□□□ 1.81
SPTBN4-211ENST00000597389 EIF4G2P78344 907 aaKnown RBP eCLIP26.37■■□□□ 1.81
SPTBN4-211ENST00000597389 LMOD2Q6P5Q4 547 aa26.34■■□□□ 1.81
SPTBN4-211ENST00000597389 TULP1O00294 542 aaPredicted RBP26.29■■□□□ 1.8
SPTBN4-211ENST00000597389 CFAP53Q96M91 514 aa26.27■■□□□ 1.8
SPTBN4-211ENST00000597389 CLIP1P30622 1438 aa26.27■■□□□ 1.8
SPTBN4-211ENST00000597389 LAS1LQ9Y4W2 734 aaKnown RBP26.25■■□□□ 1.79
SPTBN4-211ENST00000597389 MIER1Q8N108 512 aa26.24■■□□□ 1.79
SPTBN4-211ENST00000597389 NCLP19338 710 aaKnown RBP26.23■■□□□ 1.79
SPTBN4-211ENST00000597389 NPHP1O15259 732 aa26.22■■□□□ 1.79
SPTBN4-211ENST00000597389 TPRNQ4KMQ1 711 aa26.22■■□□□ 1.79
SPTBN4-211ENST00000597389 RSF1Q96T23 1441 aaPredicted RBP26.2■■□□□ 1.78
SPTBN4-211ENST00000597389 KNSTRNQ9Y448 316 aa26.2■■□□□ 1.78
SPTBN4-211ENST00000597389 CFDP1Q9UEE9 299 aaPredicted RBP26.19■■□□□ 1.78
SPTBN4-211ENST00000597389 NEUROD2Q15784 382 aa26.18■■□□□ 1.78
SPTBN4-211ENST00000597389 ZCCHC6Q5VYS8 1495 aaKnown RBP26.18■■□□□ 1.78
SPTBN4-211ENST00000597389 POGKQ9P215 609 aa26.16■■□□□ 1.78
SPTBN4-211ENST00000597389 TAOK2Q9UL54 1235 aa26.16■■□□□ 1.78
SPTBN4-211ENST00000597389 BECN1Q14457 450 aa26.14■■□□□ 1.77
SPTBN4-211ENST00000597389 FTSJ3Q8IY81 847 aaKnown RBP26.14■■□□□ 1.77
SPTBN4-211ENST00000597389 CDCA8Q53HL2 280 aa26.12■■□□□ 1.77
SPTBN4-211ENST00000597389 CARD11Q9BXL7 1154 aa26.11■■□□□ 1.77
SPTBN4-211ENST00000597389 TNNT2P45379 298 aaPredicted RBP26.11■■□□□ 1.77
SPTBN4-211ENST00000597389 MAPK8IP3Q9UPT6 1336 aa26.11■■□□□ 1.77
SPTBN4-211ENST00000597389 CASC1Q6TDU7 716 aa26.09■■□□□ 1.77
SPTBN4-211ENST00000597389 ZRSR1Q15695 479 aaKnown RBP26.08■■□□□ 1.76
SPTBN4-211ENST00000597389 TRHP20396 242 aaPredicted RBP26.07■■□□□ 1.76
SPTBN4-211ENST00000597389 GOLGA6L22H0YM25 854 aa26.04■■□□□ 1.76
SPTBN4-211ENST00000597389 DDRGK1Q96HY6 314 aa26.04■■□□□ 1.76
SPTBN4-211ENST00000597389 ERCC6Q03468 1493 aa26.04■■□□□ 1.76
SPTBN4-211ENST00000597389 MLECQ14165 292 aa26.01■■□□□ 1.75
SPTBN4-211ENST00000597389 NUDCQ9Y266 331 aa26■■□□□ 1.75
SPTBN4-211ENST00000597389 TRIM44Q96DX7 344 aaPredicted RBP25.99■■□□□ 1.75
SPTBN4-211ENST00000597389 OS9Q13438 667 aaPredicted RBP25.98■■□□□ 1.75
SPTBN4-211ENST00000597389 GOLGA3Q08378 1498 aa25.97■■□□□ 1.75
SPTBN4-211ENST00000597389 U2SURPO15042 1029 aaKnown RBP25.96■■□□□ 1.75
SPTBN4-211ENST00000597389 SOX12O15370 315 aa25.96■■□□□ 1.75
SPTBN4-211ENST00000597389 FRAT1Q92837 279 aaPredicted RBP25.96■■□□□ 1.75
SPTBN4-211ENST00000597389 CC2D1BQ5T0F9 858 aaKnown RBP25.95■■□□□ 1.75
SPTBN4-211ENST00000597389 PTMAP06454 111 aaKnown RBP25.93■■□□□ 1.74
SPTBN4-211ENST00000597389 RB1CC1Q8TDY2 1594 aa25.92■■□□□ 1.74
SPTBN4-211ENST00000597389 CEP162Q5TB80 1403 aa25.9■■□□□ 1.74
SPTBN4-211ENST00000597389 GOLGA2Q08379 1002 aa25.9■■□□□ 1.74
SPTBN4-211ENST00000597389 MYO15BQ96JP2 1530 aa25.89■■□□□ 1.73
SPTBN4-211ENST00000597389 NAP1L2Q9ULW6 460 aaPredicted RBP25.88■■□□□ 1.73
SPTBN4-211ENST00000597389 BAZ1BQ9UIG0 1483 aaKnown RBP25.86■■□□□ 1.73
SPTBN4-211ENST00000597389 FGD1P98174 961 aa25.86■■□□□ 1.73
SPTBN4-211ENST00000597389 RGS3P49796 1198 aa25.85■■□□□ 1.73
SPTBN4-211ENST00000597389 SUPT16HQ9Y5B9 1047 aaKnown RBP25.84■■□□□ 1.73
SPTBN4-211ENST00000597389 KIF27Q86VH2 1401 aa25.83■■□□□ 1.73
SPTBN4-211ENST00000597389 SAFB2Q14151 953 aaKnown RBP eCLIP25.82■■□□□ 1.72
SPTBN4-211ENST00000597389 WRNQ14191 1432 aaPredicted RBP eCLIP25.82■■□□□ 1.72
SPTBN4-211ENST00000597389 KCNJ4P48050 445 aa25.81■■□□□ 1.72
SPTBN4-211ENST00000597389 ANP32EQ9BTT0 268 aa25.81■■□□□ 1.72
SPTBN4-211ENST00000597389 SIN3AQ96ST3 1273 aa25.8■■□□□ 1.72
SPTBN4-211ENST00000597389 SRPK2P78362 688 aaKnown RBP25.79■■□□□ 1.72
SPTBN4-211ENST00000597389 DNTTIP2Q5QJE6 756 aaKnown RBP25.79■■□□□ 1.72
SPTBN4-211ENST00000597389 PLCB2Q00722 1185 aa25.79■■□□□ 1.72
SPTBN4-211ENST00000597389 EIF4G1Q04637 1599 aaKnown RBP25.78■■□□□ 1.72
SPTBN4-211ENST00000597389 CCNB3Q8WWL7 1395 aa25.76■■□□□ 1.72
SPTBN4-211ENST00000597389 KANK1Q14678 1352 aa25.76■■□□□ 1.71
SPTBN4-211ENST00000597389 DCAF11Q8TEB1 546 aa25.75■■□□□ 1.71
SPTBN4-211ENST00000597389 EEA1Q15075 1411 aa25.74■■□□□ 1.71
SPTBN4-211ENST00000597389 PNNQ9H307 717 aaKnown RBP25.73■■□□□ 1.71
SPTBN4-211ENST00000597389 HDGFP51858 240 aaKnown RBP25.72■■□□□ 1.71
SPTBN4-211ENST00000597389 ISY1Q9ULR0 285 aaKnown RBP25.71■■□□□ 1.71
SPTBN4-211ENST00000597389 HSP90AB1P08238 724 aaKnown RBP25.71■■□□□ 1.71
SPTBN4-211ENST00000597389 TMF1P82094 1093 aa25.7■■□□□ 1.7
SPTBN4-211ENST00000597389 CLSTN1O94985 981 aa25.69■■□□□ 1.7
SPTBN4-211ENST00000597389 CHMP4BQ9H444 224 aaKnown RBP25.69■■□□□ 1.7
SPTBN4-211ENST00000597389 NCBP3Q53F19 620 aaKnown RBP25.69■■□□□ 1.7
SPTBN4-211ENST00000597389 STK26Q9P289 416 aa25.69■■□□□ 1.7
SPTBN4-211ENST00000597389 GGT6Q6P531 493 aa25.66■■□□□ 1.7
SPTBN4-211ENST00000597389 MS4A1P11836 297 aa25.64■■□□□ 1.69
SPTBN4-211ENST00000597389 PAK3O75914 559 aaPredicted RBP25.63■■□□□ 1.69
SPTBN4-211ENST00000597389 MORC1Q86VD1 984 aa25.63■■□□□ 1.69
SPTBN4-211ENST00000597389 CEP164Q9UPV0 1460 aa25.63■■□□□ 1.69
SPTBN4-211ENST00000597389 CCDC180Q9P1Z9 1646 aa25.62■■□□□ 1.69
SPTBN4-211ENST00000597389 RTF1Q92541 710 aaKnown RBP25.61■■□□□ 1.69
SPTBN4-211ENST00000597389 ZNF330Q9Y3S2 320 aaPredicted RBP25.6■■□□□ 1.69
SPTBN4-211ENST00000597389 GOLGA6L6A8MZA4 724 aa25.58■■□□□ 1.69
SPTBN4-211ENST00000597389 RTN4Q9NQC3 1192 aaKnown RBP25.58■■□□□ 1.69
SPTBN4-211ENST00000597389 CSB-PGBD3P0DP91 1061 aa25.57■■□□□ 1.68
SPTBN4-211ENST00000597389 GOLGA6L4A6NEF3 574 aa25.55■■□□□ 1.68
SPTBN4-211ENST00000597389 APBB1O00213 710 aa25.54■■□□□ 1.68
SPTBN4-211ENST00000597389 PPP4R2Q9NY27 417 aa25.53■■□□□ 1.68
SPTBN4-211ENST00000597389 TNIKQ9UKE5 1360 aa25.53■■□□□ 1.68
SPTBN4-211ENST00000597389 HDGFL2Q7Z4V5 671 aaPredicted RBP25.5■■□□□ 1.67
SPTBN4-211ENST00000597389 CCDC9Q9Y3X0 531 aaKnown RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms