RNA–Protein interactions for RNA: ENST00000593336.3

LINC01828-204, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5

Gene LINC01828, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-204ENST00000593336 ATMINO43313 823 aaPredicted RBP11.23□□□□□ -0.61
LINC01828-204ENST00000593336 C7P10643 843 aa11.23□□□□□ -0.61
LINC01828-204ENST00000593336 PELP1Q8IZL8 1130 aaKnown RBP11.23□□□□□ -0.61
LINC01828-204ENST00000593336 SLC39A7Q92504 469 aa11.23□□□□□ -0.61
LINC01828-204ENST00000593336 KIF12Q96FN5 646 aa11.22□□□□□ -0.61
LINC01828-204ENST00000593336 OTUD5Q96G74 571 aa11.22□□□□□ -0.61
LINC01828-204ENST00000593336 POTEB2H3BUK9 544 aa11.2□□□□□ -0.62
LINC01828-204ENST00000593336 ZBTB47Q9UFB7 747 aaPredicted RBP11.19□□□□□ -0.62
LINC01828-204ENST00000593336 METRNQ9UJH8 293 aa11.19□□□□□ -0.62
LINC01828-204ENST00000593336 RASEFQ8IZ41 740 aa11.16□□□□□ -0.62
LINC01828-204ENST00000593336 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
LINC01828-204ENST00000593336 MAMSTRQ6ZN01 415 aa11.13□□□□□ -0.63
LINC01828-204ENST00000593336 TIE1P35590 1138 aa11.12□□□□□ -0.63
LINC01828-204ENST00000593336 SGIP1Q9BQI5 828 aa11.12□□□□□ -0.63
LINC01828-204ENST00000593336 MAP3K13O43283 966 aa11.1□□□□□ -0.63
LINC01828-204ENST00000593336 ATN1P54259 1190 aaPredicted RBP11.1□□□□□ -0.63
LINC01828-204ENST00000593336 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
LINC01828-204ENST00000593336 NUBP1P53384 320 aa11.07□□□□□ -0.64
LINC01828-204ENST00000593336 FKBP8Q14318 412 aa11.06□□□□□ -0.64
LINC01828-204ENST00000593336 CCDC180Q9P1Z9 1646 aa11.06□□□□□ -0.64
LINC01828-204ENST00000593336 POTEJP0CG39 1038 aa11.04□□□□□ -0.64
LINC01828-204ENST00000593336 FAM212AQ96EL1 285 aa11.02□□□□□ -0.65
LINC01828-204ENST00000593336 SCUBE2Q9NQ36 999 aa11.02□□□□□ -0.65
LINC01828-204ENST00000593336 TRPC6Q9Y210 931 aa11.02□□□□□ -0.65
LINC01828-204ENST00000593336 TTLL13PA6NNM8 815 aa11.01□□□□□ -0.65
LINC01828-204ENST00000593336 IER5LQ5T953 404 aa11.01□□□□□ -0.65
LINC01828-204ENST00000593336 FBXO3Q9UK99 471 aa11□□□□□ -0.65
LINC01828-204ENST00000593336 PCDHB13Q9Y5F0 798 aa11□□□□□ -0.65
LINC01828-204ENST00000593336 POTEFA5A3E0 1075 aa10.97□□□□□ -0.65
LINC01828-204ENST00000593336 POTEMA6NI47 508 aa10.95□□□□□ -0.66
LINC01828-204ENST00000593336 SEC24BO95487 1268 aa10.93□□□□□ -0.66
LINC01828-204ENST00000593336 IFNL1Q8IU54 200 aa10.93□□□□□ -0.66
LINC01828-204ENST00000593336 PCDH10Q9P2E7 1040 aa10.93□□□□□ -0.66
LINC01828-204ENST00000593336 POTEGQ6S5H5 508 aa10.92□□□□□ -0.66
LINC01828-204ENST00000593336 TRIM35Q9UPQ4 493 aa10.92□□□□□ -0.66
LINC01828-204ENST00000593336 COLQQ9Y215 455 aaPredicted RBP10.9□□□□□ -0.66
LINC01828-204ENST00000593336 PLSCR2Q9NRY7 297 aa10.88□□□□□ -0.67
LINC01828-204ENST00000593336 TMEM106CQ9BVX2 250 aa10.87□□□□□ -0.67
LINC01828-204ENST00000593336 DCAF8Q5TAQ9 597 aa10.84□□□□□ -0.67
LINC01828-204ENST00000593336 LCE2DQ5TA82 110 aaPredicted RBP10.83□□□□□ -0.68
LINC01828-204ENST00000593336 VASPP50552 380 aaPredicted RBP10.81□□□□□ -0.68
LINC01828-204ENST00000593336 PLCG2P16885 1265 aa10.8□□□□□ -0.68
LINC01828-204ENST00000593336 IRX5P78411 483 aaPredicted RBP10.79□□□□□ -0.68
LINC01828-204ENST00000593336 GSE1Q14687 1217 aa10.79□□□□□ -0.68
LINC01828-204ENST00000593336 FAM163AQ96GL9 167 aaPredicted RBP10.79□□□□□ -0.68
LINC01828-204ENST00000593336 PYGBP11216 843 aa10.78□□□□□ -0.68
LINC01828-204ENST00000593336 OCEL1Q9H607 264 aa10.76□□□□□ -0.69
LINC01828-204ENST00000593336 CHRM1P11229 460 aaPredicted RBP10.75□□□□□ -0.69
LINC01828-204ENST00000593336 ZNF467Q7Z7K2 595 aaPredicted RBP10.74□□□□□ -0.69
LINC01828-204ENST00000593336 KLHL34Q8N239 644 aa10.74□□□□□ -0.69
LINC01828-204ENST00000593336 SLAIN1Q8ND83 568 aa10.71□□□□□ -0.69
LINC01828-204ENST00000593336 PCDHB8Q9UN66 801 aa10.71□□□□□ -0.69
LINC01828-204ENST00000593336 ABCC9O60706 1549 aa10.67□□□□□ -0.7
LINC01828-204ENST00000593336 TMEM121BQ9BXQ6 578 aaPredicted RBP10.62□□□□□ -0.71
LINC01828-204ENST00000593336 ZCCHC6Q5VYS8 1495 aaKnown RBP10.61□□□□□ -0.71
LINC01828-204ENST00000593336 SNPHO15079 494 aa10.61□□□□□ -0.71
LINC01828-204ENST00000593336 GOLGA2Q08379 1002 aa10.61□□□□□ -0.71
LINC01828-204ENST00000593336 PDCD7Q8N8D1 485 aaKnown RBP10.61□□□□□ -0.71
LINC01828-204ENST00000593336 SPOCK2Q92563 424 aa10.61□□□□□ -0.71
LINC01828-204ENST00000593336 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.61□□□□□ -0.71
LINC01828-204ENST00000593336 ST18O60284 1047 aa10.6□□□□□ -0.71
LINC01828-204ENST00000593336 MKRN3Q13064 507 aaKnown RBP10.6□□□□□ -0.71
LINC01828-204ENST00000593336 PSEN1P49768 467 aa10.59□□□□□ -0.71
LINC01828-204ENST00000593336 L3MBTL3Q96JM7 780 aaPredicted RBP10.58□□□□□ -0.72
LINC01828-204ENST00000593336 PDAP1Q13442 181 aaKnown RBP10.57□□□□□ -0.72
LINC01828-204ENST00000593336 ILDR1Q86SU0 546 aaPredicted RBP10.57□□□□□ -0.72
LINC01828-204ENST00000593336 IFNLR1Q8IU57 520 aaPredicted RBP10.57□□□□□ -0.72
LINC01828-204ENST00000593336 CDAN1Q8IWY9 1227 aa10.56□□□□□ -0.72
LINC01828-204ENST00000593336 C3orf67Q6ZVT6 689 aa10.54□□□□□ -0.72
LINC01828-204ENST00000593336 DCAF8L2P0C7V8 631 aa10.53□□□□□ -0.72
LINC01828-204ENST00000593336 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC01828-204ENST00000593336 TRIM41Q8WV44 630 aa10.51□□□□□ -0.73
LINC01828-204ENST00000593336 DCAF1Q9Y4B6 1507 aa10.49□□□□□ -0.73
LINC01828-204ENST00000593336 CIZ1Q9ULV3 898 aaPredicted RBP10.49□□□□□ -0.73
LINC01828-204ENST00000593336 MYO15BQ96JP2 1530 aa10.43□□□□□ -0.74
LINC01828-204ENST00000593336 CABP2Q9NPB3 220 aa10.43□□□□□ -0.74
LINC01828-204ENST00000593336 BOLA1Q9Y3E2 137 aa10.4□□□□□ -0.74
LINC01828-204ENST00000593336 NACADO15069 1562 aa10.39□□□□□ -0.75
LINC01828-204ENST00000593336 G3V3G9 751 aa10.38□□□□□ -0.75
LINC01828-204ENST00000593336 DPY19L2Q6NUT2 758 aa10.37□□□□□ -0.75
LINC01828-204ENST00000593336 MARVELD3Q96A59 401 aa10.37□□□□□ -0.75
LINC01828-204ENST00000593336 EMP3P54852 163 aa10.35□□□□□ -0.75
LINC01828-204ENST00000593336 SPNS2Q8IVW8 549 aa10.32□□□□□ -0.76
LINC01828-204ENST00000593336 RB1CC1Q8TDY2 1594 aa10.31□□□□□ -0.76
LINC01828-204ENST00000593336 RIOK3O14730 519 aaKnown RBP10.3□□□□□ -0.76
LINC01828-204ENST00000593336 MMRN1Q13201 1228 aa10.3□□□□□ -0.76
LINC01828-204ENST00000593336 EFCAB3Q8N7B9 438 aa10.3□□□□□ -0.76
LINC01828-204ENST00000593336 SOX12O15370 315 aa10.29□□□□□ -0.76
LINC01828-204ENST00000593336 HOXB3P14651 431 aaPredicted RBP10.29□□□□□ -0.76
LINC01828-204ENST00000593336 VGFO15240 615 aaPredicted RBP10.27□□□□□ -0.77
LINC01828-204ENST00000593336 DOK7Q18PE1 504 aa10.27□□□□□ -0.77
LINC01828-204ENST00000593336 HS3ST6Q96QI5 342 aa10.27□□□□□ -0.77
LINC01828-204ENST00000593336 HOXB1P14653 301 aaPredicted RBP10.25□□□□□ -0.77
LINC01828-204ENST00000593336 FAM205CA6NFA0 338 aa10.24□□□□□ -0.77
LINC01828-204ENST00000593336 RNF25Q96BH1 459 aaPredicted RBP10.24□□□□□ -0.77
LINC01828-204ENST00000593336 POTEB3A0JP26 581 aa10.23□□□□□ -0.77
LINC01828-204ENST00000593336 POTEBQ6S5H4 581 aa10.23□□□□□ -0.77
LINC01828-204ENST00000593336 ZNF710Q8N1W2 664 aa10.23□□□□□ -0.77
LINC01828-204ENST00000593336 SHROOM4Q9ULL8 1493 aa10.23□□□□□ -0.77
LINC01828-204ENST00000593336 RIMBP2O15034 1052 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms