RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 CCDC61Q9Y6R9 512 aa17.19■□□□□ 0.34
SOX2-OT-219ENST00000593330 SLC39A7Q92504 469 aa17.18■□□□□ 0.34
SOX2-OT-219ENST00000593330 C7P10643 843 aa17.16■□□□□ 0.34
SOX2-OT-219ENST00000593330 ATMINO43313 823 aaPredicted RBP17.12■□□□□ 0.33
SOX2-OT-219ENST00000593330 KIF12Q96FN5 646 aa17.1■□□□□ 0.33
SOX2-OT-219ENST00000593330 METRNQ9UJH8 293 aa17.1■□□□□ 0.33
SOX2-OT-219ENST00000593330 MAMSTRQ6ZN01 415 aa17.06■□□□□ 0.32
SOX2-OT-219ENST00000593330 PELP1Q8IZL8 1130 aaKnown RBP17.06■□□□□ 0.32
SOX2-OT-219ENST00000593330 OTUD5Q96G74 571 aa17.05■□□□□ 0.32
SOX2-OT-219ENST00000593330 RASEFQ8IZ41 740 aa17.02■□□□□ 0.32
SOX2-OT-219ENST00000593330 FKBP8Q14318 412 aa17■□□□□ 0.31
SOX2-OT-219ENST00000593330 SGIP1Q9BQI5 828 aa17■□□□□ 0.31
SOX2-OT-219ENST00000593330 TIE1P35590 1138 aa16.99■□□□□ 0.31
SOX2-OT-219ENST00000593330 POTEB2H3BUK9 544 aa16.98■□□□□ 0.31
SOX2-OT-219ENST00000593330 MAP3K13O43283 966 aa16.96■□□□□ 0.31
SOX2-OT-219ENST00000593330 ATN1P54259 1190 aaPredicted RBP16.94■□□□□ 0.3
SOX2-OT-219ENST00000593330 FAM212AQ96EL1 285 aa16.94■□□□□ 0.3
SOX2-OT-219ENST00000593330 FBXO3Q9UK99 471 aa16.94■□□□□ 0.3
SOX2-OT-219ENST00000593330 BMP2KQ9NSY1 1161 aaPredicted RBP16.91■□□□□ 0.3
SOX2-OT-219ENST00000593330 SCUBE2Q9NQ36 999 aa16.9■□□□□ 0.3
SOX2-OT-219ENST00000593330 NUBP1P53384 320 aa16.86■□□□□ 0.29
SOX2-OT-219ENST00000593330 PCDHB13Q9Y5F0 798 aa16.86■□□□□ 0.29
SOX2-OT-219ENST00000593330 SEC24BO95487 1268 aa16.81■□□□□ 0.28
SOX2-OT-219ENST00000593330 TTLL13PA6NNM8 815 aa16.8■□□□□ 0.28
SOX2-OT-219ENST00000593330 IER5LQ5T953 404 aa16.8■□□□□ 0.28
SOX2-OT-219ENST00000593330 TRPC6Q9Y210 931 aa16.77■□□□□ 0.28
SOX2-OT-219ENST00000593330 POTEJP0CG39 1038 aa16.71■□□□□ 0.27
SOX2-OT-219ENST00000593330 TRIM35Q9UPQ4 493 aa16.71■□□□□ 0.27
SOX2-OT-219ENST00000593330 POTEMA6NI47 508 aa16.7■□□□□ 0.26
SOX2-OT-219ENST00000593330 PCDH10Q9P2E7 1040 aa16.69■□□□□ 0.26
SOX2-OT-219ENST00000593330 DCAF8Q5TAQ9 597 aa16.68■□□□□ 0.26
SOX2-OT-219ENST00000593330 IFNL1Q8IU54 200 aa16.68■□□□□ 0.26
SOX2-OT-219ENST00000593330 PLSCR2Q9NRY7 297 aa16.67■□□□□ 0.26
SOX2-OT-219ENST00000593330 POTEGQ6S5H5 508 aa16.66■□□□□ 0.26
SOX2-OT-219ENST00000593330 TMEM106CQ9BVX2 250 aa16.65■□□□□ 0.26
SOX2-OT-219ENST00000593330 POTEFA5A3E0 1075 aa16.63■□□□□ 0.25
SOX2-OT-219ENST00000593330 GSE1Q14687 1217 aa16.59■□□□□ 0.25
SOX2-OT-219ENST00000593330 KLHL34Q8N239 644 aa16.59■□□□□ 0.25
SOX2-OT-219ENST00000593330 COLQQ9Y215 455 aaPredicted RBP16.59■□□□□ 0.25
SOX2-OT-219ENST00000593330 PLCG2P16885 1265 aa16.58■□□□□ 0.24
SOX2-OT-219ENST00000593330 VASPP50552 380 aaPredicted RBP16.55■□□□□ 0.24
SOX2-OT-219ENST00000593330 FAM163AQ96GL9 167 aaPredicted RBP16.54■□□□□ 0.24
SOX2-OT-219ENST00000593330 PYGBP11216 843 aa16.53■□□□□ 0.24
SOX2-OT-219ENST00000593330 ZNF467Q7Z7K2 595 aaPredicted RBP16.49■□□□□ 0.23
SOX2-OT-219ENST00000593330 OCEL1Q9H607 264 aa16.46■□□□□ 0.23
SOX2-OT-219ENST00000593330 IRX5P78411 483 aaPredicted RBP16.43■□□□□ 0.22
SOX2-OT-219ENST00000593330 CHRM1P11229 460 aaPredicted RBP16.41■□□□□ 0.22
SOX2-OT-219ENST00000593330 SLAIN1Q8ND83 568 aa16.41■□□□□ 0.22
SOX2-OT-219ENST00000593330 GOLGA2Q08379 1002 aa16.4■□□□□ 0.22
SOX2-OT-219ENST00000593330 PCDHB8Q9UN66 801 aa16.39■□□□□ 0.21
SOX2-OT-219ENST00000593330 LCE2DQ5TA82 110 aaPredicted RBP16.35■□□□□ 0.21
SOX2-OT-219ENST00000593330 MKRN3Q13064 507 aaKnown RBP16.32■□□□□ 0.2
SOX2-OT-219ENST00000593330 SNPHO15079 494 aa16.31■□□□□ 0.2
SOX2-OT-219ENST00000593330 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.3■□□□□ 0.2
SOX2-OT-219ENST00000593330 SPOCK2Q92563 424 aa16.29■□□□□ 0.2
SOX2-OT-219ENST00000593330 L3MBTL3Q96JM7 780 aaPredicted RBP16.26■□□□□ 0.19
SOX2-OT-219ENST00000593330 PSEN1P49768 467 aa16.23■□□□□ 0.19
SOX2-OT-219ENST00000593330 TMEM121BQ9BXQ6 578 aaPredicted RBP16.22■□□□□ 0.19
SOX2-OT-219ENST00000593330 PDAP1Q13442 181 aaKnown RBP16.21■□□□□ 0.19
SOX2-OT-219ENST00000593330 C3orf67Q6ZVT6 689 aa16.2■□□□□ 0.18
SOX2-OT-219ENST00000593330 CIZ1Q9ULV3 898 aaPredicted RBP16.18■□□□□ 0.18
SOX2-OT-219ENST00000593330 ST18O60284 1047 aa16.17■□□□□ 0.18
SOX2-OT-219ENST00000593330 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.16■□□□□ 0.18
SOX2-OT-219ENST00000593330 CDAN1Q8IWY9 1227 aa16.15■□□□□ 0.18
SOX2-OT-219ENST00000593330 TRIM41Q8WV44 630 aa16.15■□□□□ 0.18
SOX2-OT-219ENST00000593330 IFNLR1Q8IU57 520 aaPredicted RBP16.14■□□□□ 0.17
SOX2-OT-219ENST00000593330 PDCD7Q8N8D1 485 aaKnown RBP16.14■□□□□ 0.17
SOX2-OT-219ENST00000593330 G3V3G9 751 aa16.09■□□□□ 0.17
SOX2-OT-219ENST00000593330 ILDR1Q86SU0 546 aaPredicted RBP16.01■□□□□ 0.15
SOX2-OT-219ENST00000593330 CABP2Q9NPB3 220 aa16■□□□□ 0.15
SOX2-OT-219ENST00000593330 BOLA1Q9Y3E2 137 aa15.93■□□□□ 0.14
SOX2-OT-219ENST00000593330 EMP3P54852 163 aa15.88■□□□□ 0.13
SOX2-OT-219ENST00000593330 MARVELD3Q96A59 401 aa15.86■□□□□ 0.13
SOX2-OT-219ENST00000593330 DPY19L2Q6NUT2 758 aa15.81■□□□□ 0.12
SOX2-OT-219ENST00000593330 TAOK2Q9UL54 1235 aa15.8■□□□□ 0.12
SOX2-OT-219ENST00000593330 RIOK3O14730 519 aaKnown RBP15.79■□□□□ 0.12
SOX2-OT-219ENST00000593330 SOX12O15370 315 aa15.76■□□□□ 0.11
SOX2-OT-219ENST00000593330 DOK7Q18PE1 504 aa15.76■□□□□ 0.11
SOX2-OT-219ENST00000593330 ZNF710Q8N1W2 664 aa15.76■□□□□ 0.11
SOX2-OT-219ENST00000593330 EFCAB3Q8N7B9 438 aa15.76■□□□□ 0.11
SOX2-OT-219ENST00000593330 RIMBP2O15034 1052 aa15.75■□□□□ 0.11
SOX2-OT-219ENST00000593330 VGFO15240 615 aaPredicted RBP15.75■□□□□ 0.11
SOX2-OT-219ENST00000593330 SPNS2Q8IVW8 549 aa15.73■□□□□ 0.11
SOX2-OT-219ENST00000593330 MMRN1Q13201 1228 aa15.7■□□□□ 0.1
SOX2-OT-219ENST00000593330 HS3ST6Q96QI5 342 aa15.7■□□□□ 0.1
SOX2-OT-219ENST00000593330 FAM205CA6NFA0 338 aa15.69■□□□□ 0.1
SOX2-OT-219ENST00000593330 HOXB3P14651 431 aaPredicted RBP15.64■□□□□ 0.09
SOX2-OT-219ENST00000593330 HOXB1P14653 301 aaPredicted RBP15.64■□□□□ 0.09
SOX2-OT-219ENST00000593330 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.63■□□□□ 0.09
SOX2-OT-219ENST00000593330 ZFP91Q96JP5 570 aaPredicted RBP15.63■□□□□ 0.09
SOX2-OT-219ENST00000593330 MICALL2Q8IY33 904 aa15.62■□□□□ 0.09
SOX2-OT-219ENST00000593330 ZSWIM6Q9HCJ5 1215 aa15.62■□□□□ 0.09
SOX2-OT-219ENST00000593330 RNF25Q96BH1 459 aaPredicted RBP15.57■□□□□ 0.08
SOX2-OT-219ENST00000593330 ERBB3P21860 1342 aa15.57■□□□□ 0.08
SOX2-OT-219ENST00000593330 NLRP6P59044 892 aa15.56■□□□□ 0.08
SOX2-OT-219ENST00000593330 KRTAP3-3Q9BYR6 98 aa15.52■□□□□ 0.08
SOX2-OT-219ENST00000593330 KRTAP3-2Q9BYR7 98 aa15.52■□□□□ 0.08
SOX2-OT-219ENST00000593330 PHF8Q9UPP1 1060 aa15.51■□□□□ 0.07
SOX2-OT-219ENST00000593330 POTEB3A0JP26 581 aa15.5■□□□□ 0.07
SOX2-OT-219ENST00000593330 POTEBQ6S5H4 581 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms