RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 NUBP1P53384 320 aa14.44□□□□□ -0.1
VMP1-215ENST00000592619 SPRYD3Q8NCJ5 442 aa14.43□□□□□ -0.1
VMP1-215ENST00000592619 CFAP44Q96MT7 982 aa14.43□□□□□ -0.1
VMP1-215ENST00000592619 CHGAP10645 457 aaKnown RBP14.42□□□□□ -0.1
VMP1-215ENST00000592619 BCANQ96GW7 911 aa14.42□□□□□ -0.1
VMP1-215ENST00000592619 PRKAR2AP13861 404 aaKnown RBP14.38□□□□□ -0.11
VMP1-215ENST00000592619 PRR29P0C7W0 189 aa14.37□□□□□ -0.11
VMP1-215ENST00000592619 KDM2AQ9Y2K7 1162 aa14.37□□□□□ -0.11
VMP1-215ENST00000592619 HS6ST3Q8IZP7 471 aa14.36□□□□□ -0.11
VMP1-215ENST00000592619 CREBZFQ9NS37 354 aa14.36□□□□□ -0.11
VMP1-215ENST00000592619 C19orf67A6NJJ6 358 aa14.34□□□□□ -0.11
VMP1-215ENST00000592619 CLEC11AQ9Y240 323 aa14.34□□□□□ -0.11
VMP1-215ENST00000592619 MNX1P50219 401 aaPredicted RBP14.33□□□□□ -0.12
VMP1-215ENST00000592619 DNAJC5Q9H3Z4 198 aa14.33□□□□□ -0.12
VMP1-215ENST00000592619 DCAF8Q5TAQ9 597 aa14.32□□□□□ -0.12
VMP1-215ENST00000592619 LHX8Q68G74 356 aa14.32□□□□□ -0.12
VMP1-215ENST00000592619 RNF25Q96BH1 459 aaPredicted RBP14.32□□□□□ -0.12
VMP1-215ENST00000592619 GABBR2O75899 941 aa14.3□□□□□ -0.12
VMP1-215ENST00000592619 TAOK2Q9UL54 1235 aa14.3□□□□□ -0.12
VMP1-215ENST00000592619 FAM212AQ96EL1 285 aa14.28□□□□□ -0.12
VMP1-215ENST00000592619 RIOK3O14730 519 aaKnown RBP14.26□□□□□ -0.13
VMP1-215ENST00000592619 TSHZ2Q9NRE2 1034 aa14.26□□□□□ -0.13
VMP1-215ENST00000592619 CHRM1P11229 460 aaPredicted RBP14.25□□□□□ -0.13
VMP1-215ENST00000592619 RASEFQ8IZ41 740 aa14.18□□□□□ -0.14
VMP1-215ENST00000592619 VGFO15240 615 aaPredicted RBP14.16□□□□□ -0.14
VMP1-215ENST00000592619 SGIP1Q9BQI5 828 aa14.15□□□□□ -0.14
VMP1-215ENST00000592619 NKX1-1Q15270 411 aaPredicted RBP14.13□□□□□ -0.15
VMP1-215ENST00000592619 CHADLQ6NUI6 762 aa14.1□□□□□ -0.15
VMP1-215ENST00000592619 STK25O00506 426 aa14.09□□□□□ -0.15
VMP1-215ENST00000592619 GTPBP6O43824 516 aaPredicted RBP14.07□□□□□ -0.16
VMP1-215ENST00000592619 PYGBP11216 843 aa14.02□□□□□ -0.17
VMP1-215ENST00000592619 POTEIP0CG38 1075 aa14.01□□□□□ -0.17
VMP1-215ENST00000592619 PRKCSHP14314 528 aaPredicted RBP14.01□□□□□ -0.17
VMP1-215ENST00000592619 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14□□□□□ -0.17
VMP1-215ENST00000592619 ZFP91Q96JP5 570 aaPredicted RBP14□□□□□ -0.17
VMP1-215ENST00000592619 BCL11BQ9C0K0 894 aaPredicted RBP13.99□□□□□ -0.17
VMP1-215ENST00000592619 RYDENQ9NUL5 291 aaKnown RBP13.99□□□□□ -0.17
VMP1-215ENST00000592619 STK24Q9Y6E0 443 aa13.98□□□□□ -0.17
VMP1-215ENST00000592619 PLSCR2Q9NRY7 297 aa13.97□□□□□ -0.17
VMP1-215ENST00000592619 FARP1Q9Y4F1 1045 aaPredicted RBP13.93□□□□□ -0.18
VMP1-215ENST00000592619 TPRNQ4KMQ1 711 aa13.91□□□□□ -0.18
VMP1-215ENST00000592619 ZNF467Q7Z7K2 595 aaPredicted RBP13.91□□□□□ -0.18
VMP1-215ENST00000592619 CD44P16070 742 aaKnown RBP13.88□□□□□ -0.19
VMP1-215ENST00000592619 NBR1Q14596 966 aa13.88□□□□□ -0.19
VMP1-215ENST00000592619 TSPYL2Q9H2G4 693 aaPredicted RBP13.88□□□□□ -0.19
VMP1-215ENST00000592619 PDAP1Q13442 181 aaKnown RBP13.83□□□□□ -0.2
VMP1-215ENST00000592619 CCDC61Q9Y6R9 512 aa13.81□□□□□ -0.2
VMP1-215ENST00000592619 CLCN6P51797 869 aa13.78□□□□□ -0.2
VMP1-215ENST00000592619 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
VMP1-215ENST00000592619 DCBLD2Q96PD2 775 aa13.75□□□□□ -0.21
VMP1-215ENST00000592619 PCDHB8Q9UN66 801 aa13.75□□□□□ -0.21
VMP1-215ENST00000592619 PCDHB13Q9Y5F0 798 aa13.75□□□□□ -0.21
VMP1-215ENST00000592619 PSEN1P49768 467 aa13.71□□□□□ -0.21
VMP1-215ENST00000592619 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
VMP1-215ENST00000592619 P3H3Q8IVL6 736 aa13.66□□□□□ -0.22
VMP1-215ENST00000592619 MFRPQ9BY79 579 aa13.65□□□□□ -0.22
VMP1-215ENST00000592619 IFNL1Q8IU54 200 aa13.63□□□□□ -0.23
VMP1-215ENST00000592619 KIF12Q96FN5 646 aa13.62□□□□□ -0.23
VMP1-215ENST00000592619 OTUD5Q96G74 571 aa13.62□□□□□ -0.23
VMP1-215ENST00000592619 CADPS2Q86UW7 1296 aa13.61□□□□□ -0.23
VMP1-215ENST00000592619 MAP3K13O43283 966 aa13.6□□□□□ -0.23
VMP1-215ENST00000592619 WDR70Q9NW82 654 aa13.59□□□□□ -0.23
VMP1-215ENST00000592619 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
VMP1-215ENST00000592619 SOX12O15370 315 aa13.57□□□□□ -0.24
VMP1-215ENST00000592619 NLRP6P59044 892 aa13.55□□□□□ -0.24
VMP1-215ENST00000592619 POTEB2H3BUK9 544 aa13.54□□□□□ -0.24
VMP1-215ENST00000592619 GALR2O43603 387 aaPredicted RBP13.54□□□□□ -0.24
VMP1-215ENST00000592619 EFCAB3Q8N7B9 438 aa13.54□□□□□ -0.24
VMP1-215ENST00000592619 FBXO22Q8NEZ5 403 aa13.54□□□□□ -0.24
VMP1-215ENST00000592619 POTEMA6NI47 508 aa13.52□□□□□ -0.25
VMP1-215ENST00000592619 CABP2Q9NPB3 220 aa13.52□□□□□ -0.25
VMP1-215ENST00000592619 KCNV2Q8TDN2 545 aa13.51□□□□□ -0.25
VMP1-215ENST00000592619 PPP1R37O75864 691 aa13.49□□□□□ -0.25
VMP1-215ENST00000592619 PHF8Q9UPP1 1060 aa13.47□□□□□ -0.25
VMP1-215ENST00000592619 POTEGQ6S5H5 508 aa13.46□□□□□ -0.25
VMP1-215ENST00000592619 ARHGEF1Q92888 912 aaKnown RBP13.4□□□□□ -0.26
VMP1-215ENST00000592619 PHF12Q96QT6 1004 aa13.4□□□□□ -0.26
VMP1-215ENST00000592619 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.38□□□□□ -0.27
VMP1-215ENST00000592619 E2F4Q16254 413 aa13.37□□□□□ -0.27
VMP1-215ENST00000592619 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
VMP1-215ENST00000592619 MS4A4AQ96JQ5 239 aa13.35□□□□□ -0.27
VMP1-215ENST00000592619 LMOD2Q6P5Q4 547 aa13.33□□□□□ -0.28
VMP1-215ENST00000592619 TMEM106CQ9BVX2 250 aa13.33□□□□□ -0.28
VMP1-215ENST00000592619 PDE4AP27815 886 aa13.32□□□□□ -0.28
VMP1-215ENST00000592619 GOLGA2Q08379 1002 aa13.32□□□□□ -0.28
VMP1-215ENST00000592619 NCKAP5LQ9HCH0 1330 aa13.32□□□□□ -0.28
VMP1-215ENST00000592619 TULP1O00294 542 aaPredicted RBP13.31□□□□□ -0.28
VMP1-215ENST00000592619 PCDH10Q9P2E7 1040 aa13.3□□□□□ -0.28
VMP1-215ENST00000592619 MFSD10Q14728 455 aa13.29□□□□□ -0.28
VMP1-215ENST00000592619 MS4A3Q96HJ5 214 aa13.28□□□□□ -0.28
VMP1-215ENST00000592619 LARP6Q9BRS8 491 aaKnown RBP13.27□□□□□ -0.29
VMP1-215ENST00000592619 CRISPLD2Q9H0B8 497 aa13.27□□□□□ -0.29
VMP1-215ENST00000592619 MKRN3Q13064 507 aaKnown RBP13.26□□□□□ -0.29
VMP1-215ENST00000592619 TRPC6Q9Y210 931 aa13.26□□□□□ -0.29
VMP1-215ENST00000592619 POTEJP0CG39 1038 aa13.25□□□□□ -0.29
VMP1-215ENST00000592619 TIE1P35590 1138 aa13.24□□□□□ -0.29
VMP1-215ENST00000592619 ARIH1Q9Y4X5 557 aaPredicted RBP13.24□□□□□ -0.29
VMP1-215ENST00000592619 TESPA1A2RU30 521 aaPredicted RBP13.23□□□□□ -0.29
VMP1-215ENST00000592619 ILDR1Q86SU0 546 aaPredicted RBP13.23□□□□□ -0.29
VMP1-215ENST00000592619 METRNQ9UJH8 293 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms