RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 FBXO3Q9UK99 471 aa11.93□□□□□ -0.5
TPM4-214ENST00000591645 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
TPM4-214ENST00000591645 RASEFQ8IZ41 740 aa11.9□□□□□ -0.5
TPM4-214ENST00000591645 PLCD3Q8N3E9 789 aa11.9□□□□□ -0.5
TPM4-214ENST00000591645 ATMINO43313 823 aaPredicted RBP11.88□□□□□ -0.51
TPM4-214ENST00000591645 ASTLQ6HA08 431 aaPredicted RBP11.88□□□□□ -0.51
TPM4-214ENST00000591645 KIF12Q96FN5 646 aa11.88□□□□□ -0.51
TPM4-214ENST00000591645 OTUD5Q96G74 571 aa11.85□□□□□ -0.51
TPM4-214ENST00000591645 MAP3K13O43283 966 aa11.82□□□□□ -0.52
TPM4-214ENST00000591645 TRPC6Q9Y210 931 aa11.82□□□□□ -0.52
TPM4-214ENST00000591645 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
TPM4-214ENST00000591645 ATN1P54259 1190 aaPredicted RBP11.79□□□□□ -0.52
TPM4-214ENST00000591645 SLC39A7Q92504 469 aa11.79□□□□□ -0.52
TPM4-214ENST00000591645 NUBP1P53384 320 aa11.78□□□□□ -0.52
TPM4-214ENST00000591645 C7P10643 843 aa11.77□□□□□ -0.53
TPM4-214ENST00000591645 VASPP50552 380 aaPredicted RBP11.76□□□□□ -0.53
TPM4-214ENST00000591645 BMP2KQ9NSY1 1161 aaPredicted RBP11.76□□□□□ -0.53
TPM4-214ENST00000591645 ZBTB47Q9UFB7 747 aaPredicted RBP11.76□□□□□ -0.53
TPM4-214ENST00000591645 POTEJP0CG39 1038 aa11.74□□□□□ -0.53
TPM4-214ENST00000591645 TIE1P35590 1138 aa11.69□□□□□ -0.54
TPM4-214ENST00000591645 PCDHB13Q9Y5F0 798 aa11.68□□□□□ -0.54
TPM4-214ENST00000591645 POTEFA5A3E0 1075 aa11.67□□□□□ -0.54
TPM4-214ENST00000591645 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
TPM4-214ENST00000591645 FAM212AQ96EL1 285 aa11.66□□□□□ -0.54
TPM4-214ENST00000591645 SGIP1Q9BQI5 828 aa11.64□□□□□ -0.55
TPM4-214ENST00000591645 IFNL1Q8IU54 200 aa11.63□□□□□ -0.55
TPM4-214ENST00000591645 COLQQ9Y215 455 aaPredicted RBP11.6□□□□□ -0.55
TPM4-214ENST00000591645 DCAF8Q5TAQ9 597 aa11.59□□□□□ -0.55
TPM4-214ENST00000591645 MAMSTRQ6ZN01 415 aa11.59□□□□□ -0.55
TPM4-214ENST00000591645 TRIM35Q9UPQ4 493 aa11.59□□□□□ -0.55
TPM4-214ENST00000591645 SEC24BO95487 1268 aa11.56□□□□□ -0.56
TPM4-214ENST00000591645 PYGBP11216 843 aa11.56□□□□□ -0.56
TPM4-214ENST00000591645 IFNLR1Q8IU57 520 aaPredicted RBP11.56□□□□□ -0.56
TPM4-214ENST00000591645 KLHL34Q8N239 644 aa11.55□□□□□ -0.56
TPM4-214ENST00000591645 SCUBE2Q9NQ36 999 aa11.55□□□□□ -0.56
TPM4-214ENST00000591645 TMEM106CQ9BVX2 250 aa11.54□□□□□ -0.56
TPM4-214ENST00000591645 POTEMA6NI47 508 aa11.52□□□□□ -0.57
TPM4-214ENST00000591645 IER5LQ5T953 404 aa11.51□□□□□ -0.57
TPM4-214ENST00000591645 POTEGQ6S5H5 508 aa11.49□□□□□ -0.57
TPM4-214ENST00000591645 SPOCK2Q92563 424 aa11.48□□□□□ -0.57
TPM4-214ENST00000591645 PLSCR2Q9NRY7 297 aa11.48□□□□□ -0.57
TPM4-214ENST00000591645 PCDHB8Q9UN66 801 aa11.48□□□□□ -0.57
TPM4-214ENST00000591645 LCE2DQ5TA82 110 aaPredicted RBP11.45□□□□□ -0.58
TPM4-214ENST00000591645 FAM163AQ96GL9 167 aaPredicted RBP11.45□□□□□ -0.58
TPM4-214ENST00000591645 GSE1Q14687 1217 aa11.42□□□□□ -0.58
TPM4-214ENST00000591645 IRX5P78411 483 aaPredicted RBP11.41□□□□□ -0.58
TPM4-214ENST00000591645 PLCG2P16885 1265 aa11.4□□□□□ -0.58
TPM4-214ENST00000591645 OCEL1Q9H607 264 aa11.35□□□□□ -0.59
TPM4-214ENST00000591645 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
TPM4-214ENST00000591645 CHRM1P11229 460 aaPredicted RBP11.33□□□□□ -0.6
TPM4-214ENST00000591645 ZNF467Q7Z7K2 595 aaPredicted RBP11.33□□□□□ -0.6
TPM4-214ENST00000591645 TRIM41Q8WV44 630 aa11.28□□□□□ -0.6
TPM4-214ENST00000591645 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
TPM4-214ENST00000591645 PSEN1P49768 467 aa11.27□□□□□ -0.61
TPM4-214ENST00000591645 PCDH10Q9P2E7 1040 aa11.27□□□□□ -0.61
TPM4-214ENST00000591645 GOLGA2Q08379 1002 aa11.24□□□□□ -0.61
TPM4-214ENST00000591645 MKRN3Q13064 507 aaKnown RBP11.24□□□□□ -0.61
TPM4-214ENST00000591645 PDCD7Q8N8D1 485 aaKnown RBP11.24□□□□□ -0.61
TPM4-214ENST00000591645 ST18O60284 1047 aa11.22□□□□□ -0.61
TPM4-214ENST00000591645 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.2□□□□□ -0.62
TPM4-214ENST00000591645 PDAP1Q13442 181 aaKnown RBP11.19□□□□□ -0.62
TPM4-214ENST00000591645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.19□□□□□ -0.627e-8■■□□□ 12.3
TPM4-214ENST00000591645 CDAN1Q8IWY9 1227 aa11.14□□□□□ -0.63
TPM4-214ENST00000591645 L3MBTL3Q96JM7 780 aaPredicted RBP11.14□□□□□ -0.63
TPM4-214ENST00000591645 CABP2Q9NPB3 220 aa11.14□□□□□ -0.63
TPM4-214ENST00000591645 DPY19L2Q6NUT2 758 aa11.13□□□□□ -0.63
TPM4-214ENST00000591645 C3orf67Q6ZVT6 689 aa11.12□□□□□ -0.63
TPM4-214ENST00000591645 ILDR1Q86SU0 546 aaPredicted RBP11.12□□□□□ -0.63
TPM4-214ENST00000591645 SNPHO15079 494 aa11.09□□□□□ -0.63
TPM4-214ENST00000591645 PKD2Q13563 968 aa11.09□□□□□ -0.63
TPM4-214ENST00000591645 RIOK3O14730 519 aaKnown RBP11.06□□□□□ -0.64
TPM4-214ENST00000591645 RNF25Q96BH1 459 aaPredicted RBP11.06□□□□□ -0.64
TPM4-214ENST00000591645 MARVELD3Q96A59 401 aa11.05□□□□□ -0.64
TPM4-214ENST00000591645 TMEM121BQ9BXQ6 578 aaPredicted RBP11.04□□□□□ -0.64
TPM4-214ENST00000591645 ECM2O94769 699 aaPredicted RBP11.03□□□□□ -0.64
TPM4-214ENST00000591645 BOLA1Q9Y3E2 137 aa11.02□□□□□ -0.65
TPM4-214ENST00000591645 EFCAB3Q8N7B9 438 aa11.01□□□□□ -0.65
TPM4-214ENST00000591645 VGFO15240 615 aaPredicted RBP11□□□□□ -0.65
TPM4-214ENST00000591645 G3V3G9 751 aa10.98□□□□□ -0.65
TPM4-214ENST00000591645 TAOK2Q9UL54 1235 aa10.98□□□□□ -0.65
TPM4-214ENST00000591645 RGL2O15211 777 aa10.94□□□□□ -0.66
TPM4-214ENST00000591645 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.93□□□□□ -0.66
TPM4-214ENST00000591645 EMP3P54852 163 aa10.93□□□□□ -0.66
TPM4-214ENST00000591645 ZFP91Q96JP5 570 aaPredicted RBP10.93□□□□□ -0.66
TPM4-214ENST00000591645 POTEB3A0JP26 581 aa10.9□□□□□ -0.66
TPM4-214ENST00000591645 HOXB3P14651 431 aaPredicted RBP10.9□□□□□ -0.66
TPM4-214ENST00000591645 POTEBQ6S5H4 581 aa10.9□□□□□ -0.66
TPM4-214ENST00000591645 FAM205CA6NFA0 338 aa10.88□□□□□ -0.67
TPM4-214ENST00000591645 SPNS2Q8IVW8 549 aa10.87□□□□□ -0.67
TPM4-214ENST00000591645 MS4A4AQ96JQ5 239 aa10.87□□□□□ -0.67
TPM4-214ENST00000591645 HS3ST6Q96QI5 342 aa10.87□□□□□ -0.67
TPM4-214ENST00000591645 SOX12O15370 315 aa10.86□□□□□ -0.67
TPM4-214ENST00000591645 MICALL2Q8IY33 904 aa10.86□□□□□ -0.67
TPM4-214ENST00000591645 PHF8Q9UPP1 1060 aa10.86□□□□□ -0.67
TPM4-214ENST00000591645 BCL11BQ9C0K0 894 aaPredicted RBP10.85□□□□□ -0.67
TPM4-214ENST00000591645 TMEM92Q6UXU6 159 aa10.84□□□□□ -0.67
TPM4-214ENST00000591645 MMRN1Q13201 1228 aa10.83□□□□□ -0.68
TPM4-214ENST00000591645 STK25O00506 426 aa10.82□□□□□ -0.68
TPM4-214ENST00000591645 ZNF710Q8N1W2 664 aa10.81□□□□□ -0.68
TPM4-214ENST00000591645 KRTAP3-3Q9BYR6 98 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms