RNA–Protein interactions for RNA: ENST00000590852.1

BECN1-216, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 570 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-216ENST00000590852 CCDC61Q9Y6R9 512 aa13.32□□□□□ -0.28
BECN1-216ENST00000590852 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
BECN1-216ENST00000590852 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
BECN1-216ENST00000590852 ZBTB47Q9UFB7 747 aaPredicted RBP13.28□□□□□ -0.28
BECN1-216ENST00000590852 NUBP1P53384 320 aa13.24□□□□□ -0.29
BECN1-216ENST00000590852 MS4A3Q96HJ5 214 aa13.24□□□□□ -0.29
BECN1-216ENST00000590852 LHX8Q68G74 356 aa13.22□□□□□ -0.29
BECN1-216ENST00000590852 KIF12Q96FN5 646 aa13.22□□□□□ -0.29
BECN1-216ENST00000590852 RB1CC1Q8TDY2 1594 aa13.18□□□□□ -0.3
BECN1-216ENST00000590852 VASPP50552 380 aaPredicted RBP13.17□□□□□ -0.3
BECN1-216ENST00000590852 MAP3K13O43283 966 aa13.14□□□□□ -0.31
BECN1-216ENST00000590852 ASTLQ6HA08 431 aaPredicted RBP13.13□□□□□ -0.31
BECN1-216ENST00000590852 PELP1Q8IZL8 1130 aaKnown RBP13.13□□□□□ -0.31
BECN1-216ENST00000590852 ATMINO43313 823 aaPredicted RBP13.1□□□□□ -0.31
BECN1-216ENST00000590852 FAM212AQ96EL1 285 aa13.1□□□□□ -0.31
BECN1-216ENST00000590852 NACADO15069 1562 aa13.08□□□□□ -0.32
BECN1-216ENST00000590852 DCAF8L2P0C7V8 631 aa13.07□□□□□ -0.32
BECN1-216ENST00000590852 TRPC6Q9Y210 931 aa13.07□□□□□ -0.32
BECN1-216ENST00000590852 SGIP1Q9BQI5 828 aa13.05□□□□□ -0.32
BECN1-216ENST00000590852 ATN1P54259 1190 aaPredicted RBP13.02□□□□□ -0.33
BECN1-216ENST00000590852 KLHL34Q8N239 644 aa13.02□□□□□ -0.33
BECN1-216ENST00000590852 BMP2KQ9NSY1 1161 aaPredicted RBP13.02□□□□□ -0.33
BECN1-216ENST00000590852 PCDHB13Q9Y5F0 798 aa13.01□□□□□ -0.33
BECN1-216ENST00000590852 POTEB2H3BUK9 544 aa13□□□□□ -0.33
BECN1-216ENST00000590852 TIE1P35590 1138 aa13□□□□□ -0.33
BECN1-216ENST00000590852 DCAF8Q5TAQ9 597 aa13□□□□□ -0.33
BECN1-216ENST00000590852 SLC39A7Q92504 469 aa12.98□□□□□ -0.33
BECN1-216ENST00000590852 METRNQ9UJH8 293 aa12.98□□□□□ -0.33
BECN1-216ENST00000590852 UNC13AQ9UPW8 1703 aa12.97□□□□□ -0.33
BECN1-216ENST00000590852 C7P10643 843 aa12.97□□□□□ -0.33
BECN1-216ENST00000590852 IFNL1Q8IU54 200 aa12.97□□□□□ -0.33
BECN1-216ENST00000590852 IFNLR1Q8IU57 520 aaPredicted RBP12.97□□□□□ -0.33
BECN1-216ENST00000590852 TTLL13PA6NNM8 815 aa12.94□□□□□ -0.34
BECN1-216ENST00000590852 PYGBP11216 843 aa12.93□□□□□ -0.34
BECN1-216ENST00000590852 GSE1Q14687 1217 aa12.9□□□□□ -0.34
BECN1-216ENST00000590852 OTUD5Q96G74 571 aa12.9□□□□□ -0.34
BECN1-216ENST00000590852 ZCCHC6Q5VYS8 1495 aaKnown RBP12.88□□□□□ -0.35
BECN1-216ENST00000590852 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
BECN1-216ENST00000590852 BICRAQ9NZM4 1560 aa12.87□□□□□ -0.35
BECN1-216ENST00000590852 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
BECN1-216ENST00000590852 POTEFA5A3E0 1075 aa12.86□□□□□ -0.35
BECN1-216ENST00000590852 POTEJP0CG39 1038 aa12.86□□□□□ -0.35
BECN1-216ENST00000590852 TRIM35Q9UPQ4 493 aa12.84□□□□□ -0.35
BECN1-216ENST00000590852 CHRM1P11229 460 aaPredicted RBP12.83□□□□□ -0.36
BECN1-216ENST00000590852 TMEM106CQ9BVX2 250 aa12.83□□□□□ -0.36
BECN1-216ENST00000590852 PCDHB8Q9UN66 801 aa12.82□□□□□ -0.36
BECN1-216ENST00000590852 DCAF1Q9Y4B6 1507 aa12.8□□□□□ -0.36
BECN1-216ENST00000590852 IER5LQ5T953 404 aa12.79□□□□□ -0.36
BECN1-216ENST00000590852 COLQQ9Y215 455 aaPredicted RBP12.79□□□□□ -0.36
BECN1-216ENST00000590852 ZNF467Q7Z7K2 595 aaPredicted RBP12.74□□□□□ -0.37
BECN1-216ENST00000590852 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
BECN1-216ENST00000590852 SCRIBQ14160 1630 aa12.73□□□□□ -0.37
BECN1-216ENST00000590852 SEC24BO95487 1268 aa12.73□□□□□ -0.37
BECN1-216ENST00000590852 MAMSTRQ6ZN01 415 aa12.72□□□□□ -0.37
BECN1-216ENST00000590852 IRX5P78411 483 aaPredicted RBP12.68□□□□□ -0.38
BECN1-216ENST00000590852 SCUBE2Q9NQ36 999 aa12.66□□□□□ -0.38
BECN1-216ENST00000590852 PSEN1P49768 467 aa12.63□□□□□ -0.39
BECN1-216ENST00000590852 PLCG2P16885 1265 aa12.62□□□□□ -0.39
BECN1-216ENST00000590852 OCEL1Q9H607 264 aa12.61□□□□□ -0.39
BECN1-216ENST00000590852 TRIM41Q8WV44 630 aa12.6□□□□□ -0.39
BECN1-216ENST00000590852 PDAP1Q13442 181 aaKnown RBP12.59□□□□□ -0.39
BECN1-216ENST00000590852 SHROOM4Q9ULL8 1493 aa12.57□□□□□ -0.4
BECN1-216ENST00000590852 CC2D2AQ9P2K1 1620 aa12.55□□□□□ -0.4
BECN1-216ENST00000590852 MKRN3Q13064 507 aaKnown RBP12.53□□□□□ -0.4
BECN1-216ENST00000590852 PDCD7Q8N8D1 485 aaKnown RBP12.53□□□□□ -0.4
BECN1-216ENST00000590852 EIF4G1Q04637 1599 aaKnown RBP12.52□□□□□ -0.4
BECN1-216ENST00000590852 GOLGA2Q08379 1002 aa12.52□□□□□ -0.41
BECN1-216ENST00000590852 ILDR1Q86SU0 546 aaPredicted RBP12.5□□□□□ -0.41
BECN1-216ENST00000590852 CECR2Q9BXF3 1484 aa12.5□□□□□ -0.41
BECN1-216ENST00000590852 RNF25Q96BH1 459 aaPredicted RBP12.49□□□□□ -0.41
BECN1-216ENST00000590852 LCE2DQ5TA82 110 aaPredicted RBP12.47□□□□□ -0.41
BECN1-216ENST00000590852 CABP2Q9NPB3 220 aa12.47□□□□□ -0.41
BECN1-216ENST00000590852 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.47□□□□□ -0.411e-6■□□□□ 9.1
BECN1-216ENST00000590852 RIOK3O14730 519 aaKnown RBP12.44□□□□□ -0.42
BECN1-216ENST00000590852 SLAIN1Q8ND83 568 aa12.44□□□□□ -0.42
BECN1-216ENST00000590852 POTEMA6NI47 508 aa12.42□□□□□ -0.42
BECN1-216ENST00000590852 FAM163AQ96GL9 167 aaPredicted RBP12.42□□□□□ -0.42
BECN1-216ENST00000590852 POTEGQ6S5H5 508 aa12.4□□□□□ -0.42
BECN1-216ENST00000590852 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
BECN1-216ENST00000590852 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
BECN1-216ENST00000590852 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.38□□□□□ -0.43
BECN1-216ENST00000590852 VGFO15240 615 aaPredicted RBP12.37□□□□□ -0.43
BECN1-216ENST00000590852 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
BECN1-216ENST00000590852 EFCAB3Q8N7B9 438 aa12.36□□□□□ -0.43
BECN1-216ENST00000590852 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
BECN1-216ENST00000590852 PKD2Q13563 968 aa12.33□□□□□ -0.44
BECN1-216ENST00000590852 C3orf67Q6ZVT6 689 aa12.31□□□□□ -0.44
BECN1-216ENST00000590852 ECM2O94769 699 aaPredicted RBP12.29□□□□□ -0.44
BECN1-216ENST00000590852 BOLA1Q9Y3E2 137 aa12.29□□□□□ -0.44
BECN1-216ENST00000590852 ST18O60284 1047 aa12.27□□□□□ -0.45
BECN1-216ENST00000590852 SOX12O15370 315 aa12.26□□□□□ -0.45
BECN1-216ENST00000590852 TMEM121BQ9BXQ6 578 aaPredicted RBP12.25□□□□□ -0.45
BECN1-216ENST00000590852 TAOK2Q9UL54 1235 aa12.24□□□□□ -0.45
BECN1-216ENST00000590852 RGL2O15211 777 aa12.23□□□□□ -0.45
BECN1-216ENST00000590852 PCDH10Q9P2E7 1040 aa12.23□□□□□ -0.45
BECN1-216ENST00000590852 SNPHO15079 494 aa12.22□□□□□ -0.45
BECN1-216ENST00000590852 MS4A4AQ96JQ5 239 aa12.22□□□□□ -0.45
BECN1-216ENST00000590852 BCL11BQ9C0K0 894 aaPredicted RBP12.22□□□□□ -0.45
BECN1-216ENST00000590852 G3V3G9 751 aa12.2□□□□□ -0.46
BECN1-216ENST00000590852 PHF8Q9UPP1 1060 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms