RNA–Protein interactions for RNA: ENST00000590485.1

SAFB-208, Transcript of scaffold attachment factor B, humanhuman

TSL 3

Gene SAFB, Length 548 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-208ENST00000590485 PLCD3Q8N3E9 789 aa11.74□□□□□ -0.53
SAFB-208ENST00000590485 PHF12Q96QT6 1004 aa11.73□□□□□ -0.53
SAFB-208ENST00000590485 IFNLR1Q8IU57 520 aaPredicted RBP11.72□□□□□ -0.53
SAFB-208ENST00000590485 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
SAFB-208ENST00000590485 MIER1Q8N108 512 aa11.7□□□□□ -0.54
SAFB-208ENST00000590485 KLHL34Q8N239 644 aa11.69□□□□□ -0.54
SAFB-208ENST00000590485 POTEJP0CG39 1038 aa11.66□□□□□ -0.54
SAFB-208ENST00000590485 LCE2DQ5TA82 110 aaPredicted RBP11.63□□□□□ -0.55
SAFB-208ENST00000590485 PCDH10Q9P2E7 1040 aa11.63□□□□□ -0.55
SAFB-208ENST00000590485 SPOCK2Q92563 424 aa11.61□□□□□ -0.55
SAFB-208ENST00000590485 ZBTB47Q9UFB7 747 aaPredicted RBP11.61□□□□□ -0.55
SAFB-208ENST00000590485 PAK3O75914 559 aaPredicted RBP11.6□□□□□ -0.55
SAFB-208ENST00000590485 ASTLQ6HA08 431 aaPredicted RBP11.6□□□□□ -0.55
SAFB-208ENST00000590485 METRNQ9UJH8 293 aa11.6□□□□□ -0.55
SAFB-208ENST00000590485 MNX1P50219 401 aaPredicted RBP11.58□□□□□ -0.56
SAFB-208ENST00000590485 ATMINO43313 823 aaPredicted RBP11.55□□□□□ -0.56
SAFB-208ENST00000590485 MS4A3Q96HJ5 214 aa11.55□□□□□ -0.56
SAFB-208ENST00000590485 C7P10643 843 aa11.52□□□□□ -0.57
SAFB-208ENST00000590485 SLC39A7Q92504 469 aa11.52□□□□□ -0.57
SAFB-208ENST00000590485 NPM1P06748 294 aaKnown RBP eCLIP11.48□□□□□ -0.57
SAFB-208ENST00000590485 MAMSTRQ6ZN01 415 aa11.47□□□□□ -0.57
SAFB-208ENST00000590485 FAM163AQ96GL9 167 aaPredicted RBP11.43□□□□□ -0.58
SAFB-208ENST00000590485 POTEFA5A3E0 1075 aa11.41□□□□□ -0.58
SAFB-208ENST00000590485 ATN1P54259 1190 aaPredicted RBP11.41□□□□□ -0.58
SAFB-208ENST00000590485 PKD2Q13563 968 aa11.41□□□□□ -0.58
SAFB-208ENST00000590485 SCUBE2Q9NQ36 999 aa11.39□□□□□ -0.59
SAFB-208ENST00000590485 CIZ1Q9ULV3 898 aaPredicted RBP11.39□□□□□ -0.59
SAFB-208ENST00000590485 ECM2O94769 699 aaPredicted RBP11.36□□□□□ -0.59
SAFB-208ENST00000590485 DCAF8L2P0C7V8 631 aa11.35□□□□□ -0.59
SAFB-208ENST00000590485 NUBP1P53384 320 aa11.34□□□□□ -0.59
SAFB-208ENST00000590485 GSE1Q14687 1217 aa11.34□□□□□ -0.59
SAFB-208ENST00000590485 CCDC61Q9Y6R9 512 aa11.34□□□□□ -0.59
SAFB-208ENST00000590485 FAM212AQ96EL1 285 aa11.32□□□□□ -0.6
SAFB-208ENST00000590485 TRIM41Q8WV44 630 aa11.31□□□□□ -0.6
SAFB-208ENST00000590485 BMP2KQ9NSY1 1161 aaPredicted RBP11.31□□□□□ -0.6
SAFB-208ENST00000590485 TRPC6Q9Y210 931 aa11.31□□□□□ -0.6
SAFB-208ENST00000590485 DCAF8Q5TAQ9 597 aa11.29□□□□□ -0.6
SAFB-208ENST00000590485 KIF12Q96FN5 646 aa11.29□□□□□ -0.6
SAFB-208ENST00000590485 TSPYL2Q9H2G4 693 aaPredicted RBP11.29□□□□□ -0.6
SAFB-208ENST00000590485 CDAN1Q8IWY9 1227 aa11.26□□□□□ -0.61
SAFB-208ENST00000590485 RASEFQ8IZ41 740 aa11.25□□□□□ -0.61
SAFB-208ENST00000590485 COLQQ9Y215 455 aaPredicted RBP11.24□□□□□ -0.61
SAFB-208ENST00000590485 RGL2O15211 777 aa11.21□□□□□ -0.61
SAFB-208ENST00000590485 TIE1P35590 1138 aa11.21□□□□□ -0.61
SAFB-208ENST00000590485 MAP3K13O43283 966 aa11.18□□□□□ -0.62
SAFB-208ENST00000590485 TTLL13PA6NNM8 815 aa11.16□□□□□ -0.62
SAFB-208ENST00000590485 ST18O60284 1047 aa11.12□□□□□ -0.63
SAFB-208ENST00000590485 SLC24A1O60721 1099 aa11.11□□□□□ -0.63
SAFB-208ENST00000590485 SEC24BO95487 1268 aa11.11□□□□□ -0.63
SAFB-208ENST00000590485 CHRM1P11229 460 aaPredicted RBP11.11□□□□□ -0.63
SAFB-208ENST00000590485 TAOK2Q9UL54 1235 aa11.11□□□□□ -0.63
SAFB-208ENST00000590485 PYGBP11216 843 aa11.1□□□□□ -0.63
SAFB-208ENST00000590485 RIOK3O14730 519 aaKnown RBP11.09□□□□□ -0.63
SAFB-208ENST00000590485 RNF25Q96BH1 459 aaPredicted RBP11.08□□□□□ -0.64
SAFB-208ENST00000590485 IER5LQ5T953 404 aa11.07□□□□□ -0.64
SAFB-208ENST00000590485 TRIM35Q9UPQ4 493 aa11.07□□□□□ -0.64
SAFB-208ENST00000590485 CHGAP10645 457 aaKnown RBP11.05□□□□□ -0.64
SAFB-208ENST00000590485 MMRN1Q13201 1228 aa11.05□□□□□ -0.64
SAFB-208ENST00000590485 SLAIN1Q8ND83 568 aa11.05□□□□□ -0.64
SAFB-208ENST00000590485 BBXQ8WY36 941 aaPredicted RBP11.03□□□□□ -0.64
SAFB-208ENST00000590485 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.03□□□□□ -0.64
SAFB-208ENST00000590485 VGFO15240 615 aaPredicted RBP11.02□□□□□ -0.65
SAFB-208ENST00000590485 SPNS2Q8IVW8 549 aa11.02□□□□□ -0.65
SAFB-208ENST00000590485 PLCB2Q00722 1185 aa11□□□□□ -0.65
SAFB-208ENST00000590485 HS6ST3Q8IZP7 471 aa11□□□□□ -0.65
SAFB-208ENST00000590485 ZNF467Q7Z7K2 595 aaPredicted RBP10.99□□□□□ -0.65
SAFB-208ENST00000590485 SGIP1Q9BQI5 828 aa10.97□□□□□ -0.65
SAFB-208ENST00000590485 STK25O00506 426 aa10.96□□□□□ -0.65
SAFB-208ENST00000590485 PCDHB13Q9Y5F0 798 aa10.96□□□□□ -0.65
SAFB-208ENST00000590485 IFNL1Q8IU54 200 aa10.93□□□□□ -0.66
SAFB-208ENST00000590485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.92□□□□□ -0.66
SAFB-208ENST00000590485 ZFP91Q96JP5 570 aaPredicted RBP10.92□□□□□ -0.66
SAFB-208ENST00000590485 TMEM121BQ9BXQ6 578 aaPredicted RBP10.92□□□□□ -0.66
SAFB-208ENST00000590485 IRX5P78411 483 aaPredicted RBP10.91□□□□□ -0.66
SAFB-208ENST00000590485 PCDHB8Q9UN66 801 aa10.91□□□□□ -0.66
SAFB-208ENST00000590485 PLCG2P16885 1265 aa10.9□□□□□ -0.66
SAFB-208ENST00000590485 PDAP1Q13442 181 aaKnown RBP10.9□□□□□ -0.66
SAFB-208ENST00000590485 BCL11BQ9C0K0 894 aaPredicted RBP10.9□□□□□ -0.66
SAFB-208ENST00000590485 STK24Q9Y6E0 443 aa10.9□□□□□ -0.66
SAFB-208ENST00000590485 PAXIP1Q6ZW49 1069 aaPredicted RBP10.89□□□□□ -0.67
SAFB-208ENST00000590485 CFAP44Q96MT7 982 aa10.89□□□□□ -0.67
SAFB-208ENST00000590485 TMEM106CQ9BVX2 250 aa10.89□□□□□ -0.67
SAFB-208ENST00000590485 HAP1P54257 671 aaPredicted RBP10.87□□□□□ -0.67
SAFB-208ENST00000590485 SPRYD3Q8NCJ5 442 aa10.87□□□□□ -0.67
SAFB-208ENST00000590485 MARVELD3Q96A59 401 aa10.87□□□□□ -0.67
SAFB-208ENST00000590485 DNAJC5Q9H3Z4 198 aa10.87□□□□□ -0.67
SAFB-208ENST00000590485 PSEN1P49768 467 aa10.85□□□□□ -0.67
SAFB-208ENST00000590485 SNPHO15079 494 aa10.79□□□□□ -0.68
SAFB-208ENST00000590485 OCEL1Q9H607 264 aa10.79□□□□□ -0.68
SAFB-208ENST00000590485 RYDENQ9NUL5 291 aaKnown RBP10.79□□□□□ -0.68
SAFB-208ENST00000590485 NKX1-1Q15270 411 aaPredicted RBP10.78□□□□□ -0.68
SAFB-208ENST00000590485 KRTAP3-3Q9BYR6 98 aa10.77□□□□□ -0.69
SAFB-208ENST00000590485 KRTAP3-2Q9BYR7 98 aa10.77□□□□□ -0.69
SAFB-208ENST00000590485 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.76□□□□□ -0.69
SAFB-208ENST00000590485 POTEB3A0JP26 581 aa10.75□□□□□ -0.69
SAFB-208ENST00000590485 POTEBQ6S5H4 581 aa10.75□□□□□ -0.69
SAFB-208ENST00000590485 GTPBP6O43824 516 aaPredicted RBP10.72□□□□□ -0.69
SAFB-208ENST00000590485 EMP3P54852 163 aa10.71□□□□□ -0.69
SAFB-208ENST00000590485 CABP2Q9NPB3 220 aa10.71□□□□□ -0.69
SAFB-208ENST00000590485 GOLGA2Q08379 1002 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms