RNA–Protein interactions for RNA: ENST00000589550.1

PIK3C3-211, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 3

Gene PIK3C3, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-211ENST00000589550 PLEKHG5O94827 1062 aa11.28□□□□□ -0.6
PIK3C3-211ENST00000589550 PABPN1Q86U42 306 aaKnown RBP eCLIP11.27□□□□□ -0.61
PIK3C3-211ENST00000589550 TRIM41Q8WV44 630 aa11.27□□□□□ -0.61
PIK3C3-211ENST00000589550 TSHZ2Q9NRE2 1034 aa11.24□□□□□ -0.61
PIK3C3-211ENST00000589550 CHGAP10645 457 aaKnown RBP11.23□□□□□ -0.61
PIK3C3-211ENST00000589550 CIZ1Q9ULV3 898 aaPredicted RBP11.23□□□□□ -0.61
PIK3C3-211ENST00000589550 SPDYE1Q8NFV5 336 aaPredicted RBP11.18□□□□□ -0.62
PIK3C3-211ENST00000589550 DNAJC5Q9H3Z4 198 aa11.17□□□□□ -0.62
PIK3C3-211ENST00000589550 HS6ST3Q8IZP7 471 aa11.16□□□□□ -0.62
PIK3C3-211ENST00000589550 NBR1Q14596 966 aa11.14□□□□□ -0.63
PIK3C3-211ENST00000589550 PRKAR2AP13861 404 aaKnown RBP11.11□□□□□ -0.63
PIK3C3-211ENST00000589550 EVX2Q03828 476 aa11.11□□□□□ -0.63
PIK3C3-211ENST00000589550 GSE1Q14687 1217 aa11.1□□□□□ -0.63
PIK3C3-211ENST00000589550 CLEC11AQ9Y240 323 aa11.07□□□□□ -0.64
PIK3C3-211ENST00000589550 C19orf67A6NJJ6 358 aa11.06□□□□□ -0.64
PIK3C3-211ENST00000589550 RNF25Q96BH1 459 aaPredicted RBP11□□□□□ -0.65
PIK3C3-211ENST00000589550 RIOK3O14730 519 aaKnown RBP10.98□□□□□ -0.65
PIK3C3-211ENST00000589550 NUBP1P53384 320 aa10.96□□□□□ -0.65
PIK3C3-211ENST00000589550 GABBR2O75899 941 aa10.93□□□□□ -0.66
PIK3C3-211ENST00000589550 NKX1-1Q15270 411 aaPredicted RBP10.93□□□□□ -0.66
PIK3C3-211ENST00000589550 GTPBP6O43824 516 aaPredicted RBP10.92□□□□□ -0.66
PIK3C3-211ENST00000589550 DCAF8Q5TAQ9 597 aa10.92□□□□□ -0.66
PIK3C3-211ENST00000589550 VGFO15240 615 aaPredicted RBP10.91□□□□□ -0.66
PIK3C3-211ENST00000589550 RYDENQ9NUL5 291 aaKnown RBP10.9□□□□□ -0.66
PIK3C3-211ENST00000589550 PRR29P0C7W0 189 aa10.89□□□□□ -0.67
PIK3C3-211ENST00000589550 FAM212AQ96EL1 285 aa10.89□□□□□ -0.67
PIK3C3-211ENST00000589550 STK25O00506 426 aa10.88□□□□□ -0.67
PIK3C3-211ENST00000589550 CHRM1P11229 460 aaPredicted RBP10.86□□□□□ -0.67
PIK3C3-211ENST00000589550 SGIP1Q9BQI5 828 aa10.86□□□□□ -0.67
PIK3C3-211ENST00000589550 CLCN6P51797 869 aa10.85□□□□□ -0.67
PIK3C3-211ENST00000589550 LHX8Q68G74 356 aa10.84□□□□□ -0.67
PIK3C3-211ENST00000589550 CHADLQ6NUI6 762 aa10.84□□□□□ -0.67
PIK3C3-211ENST00000589550 ERICH6Q7L0X2 663 aa10.79□□□□□ -0.68
PIK3C3-211ENST00000589550 P3H3Q8IVL6 736 aa10.79□□□□□ -0.68
PIK3C3-211ENST00000589550 BCL11BQ9C0K0 894 aaPredicted RBP10.77□□□□□ -0.69
PIK3C3-211ENST00000589550 CREBZFQ9NS37 354 aa10.77□□□□□ -0.69
PIK3C3-211ENST00000589550 STK24Q9Y6E0 443 aa10.77□□□□□ -0.69
PIK3C3-211ENST00000589550 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.75□□□□□ -0.69
PIK3C3-211ENST00000589550 CD44P16070 742 aaKnown RBP10.75□□□□□ -0.69
PIK3C3-211ENST00000589550 MNX1P50219 401 aaPredicted RBP10.75□□□□□ -0.69
PIK3C3-211ENST00000589550 ZFP91Q96JP5 570 aaPredicted RBP10.75□□□□□ -0.69
PIK3C3-211ENST00000589550 FARP1Q9Y4F1 1045 aaPredicted RBP10.75□□□□□ -0.69
PIK3C3-211ENST00000589550 GTF3C3Q9Y5Q9 886 aa10.74□□□□□ -0.69
PIK3C3-211ENST00000589550 RASEFQ8IZ41 740 aa10.72□□□□□ -0.69
PIK3C3-211ENST00000589550 TIMELESSQ9UNS1 1208 aa10.72□□□□□ -0.69
PIK3C3-211ENST00000589550 TULP1O00294 542 aaPredicted RBP10.71□□□□□ -0.69
PIK3C3-211ENST00000589550 TMEM132AQ24JP5 1023 aa10.7□□□□□ -0.7
PIK3C3-211ENST00000589550 POTEIP0CG38 1075 aa10.65□□□□□ -0.7
PIK3C3-211ENST00000589550 PYGBP11216 843 aa10.65□□□□□ -0.7
PIK3C3-211ENST00000589550 WDR70Q9NW82 654 aa10.64□□□□□ -0.71
PIK3C3-211ENST00000589550 ZNF579Q8NAF0 562 aaKnown RBP10.63□□□□□ -0.71
PIK3C3-211ENST00000589550 ZNF467Q7Z7K2 595 aaPredicted RBP10.6□□□□□ -0.71
PIK3C3-211ENST00000589550 DCBLD2Q96PD2 775 aa10.6□□□□□ -0.71
PIK3C3-211ENST00000589550 KCNV2Q8TDN2 545 aa10.58□□□□□ -0.72
PIK3C3-211ENST00000589550 LMOD2Q6P5Q4 547 aa10.57□□□□□ -0.72
PIK3C3-211ENST00000589550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
PIK3C3-211ENST00000589550 PDAP1Q13442 181 aaKnown RBP10.54□□□□□ -0.72
PIK3C3-211ENST00000589550 ZRANB1Q9UGI0 708 aa10.54□□□□□ -0.72
PIK3C3-211ENST00000589550 CADPS2Q86UW7 1296 aa10.53□□□□□ -0.72
PIK3C3-211ENST00000589550 ARXQ96QS3 562 aa10.53□□□□□ -0.72
PIK3C3-211ENST00000589550 PAK3O75914 559 aaPredicted RBP10.48□□□□□ -0.73
PIK3C3-211ENST00000589550 ARHGEF1Q92888 912 aaKnown RBP10.48□□□□□ -0.73
PIK3C3-211ENST00000589550 C14orf37Q86TY3 774 aa10.46□□□□□ -0.73
PIK3C3-211ENST00000589550 MFRPQ9BY79 579 aa10.45□□□□□ -0.74
PIK3C3-211ENST00000589550 TSPYL2Q9H2G4 693 aaPredicted RBP10.44□□□□□ -0.74
PIK3C3-211ENST00000589550 GALR2O43603 387 aaPredicted RBP10.43□□□□□ -0.74
PIK3C3-211ENST00000589550 PSEN1P49768 467 aa10.42□□□□□ -0.74
PIK3C3-211ENST00000589550 BRPF1P55201 1214 aaPredicted RBP10.41□□□□□ -0.74
PIK3C3-211ENST00000589550 E2F4Q16254 413 aa10.41□□□□□ -0.74
PIK3C3-211ENST00000589550 PCDHB8Q9UN66 801 aa10.4□□□□□ -0.74
PIK3C3-211ENST00000589550 PCDHB13Q9Y5F0 798 aa10.4□□□□□ -0.74
PIK3C3-211ENST00000589550 ZC3H15Q8WU90 426 aaKnown RBP10.38□□□□□ -0.75
PIK3C3-211ENST00000589550 TESPA1A2RU30 521 aaPredicted RBP10.37□□□□□ -0.75
PIK3C3-211ENST00000589550 NLRP6P59044 892 aa10.37□□□□□ -0.75
PIK3C3-211ENST00000589550 SOX12O15370 315 aa10.36□□□□□ -0.75
PIK3C3-211ENST00000589550 CCDC61Q9Y6R9 512 aa10.36□□□□□ -0.75
PIK3C3-211ENST00000589550 FBXO22Q8NEZ5 403 aa10.34□□□□□ -0.75
PIK3C3-211ENST00000589550 OTUD5Q96G74 571 aa10.34□□□□□ -0.75
PIK3C3-211ENST00000589550 NEUROD2Q15784 382 aa10.33□□□□□ -0.76
PIK3C3-211ENST00000589550 SMYD5Q6GMV2 418 aa10.33□□□□□ -0.76
PIK3C3-211ENST00000589550 PHF12Q96QT6 1004 aa10.33□□□□□ -0.76
PIK3C3-211ENST00000589550 PLSCR2Q9NRY7 297 aa10.33□□□□□ -0.76
PIK3C3-211ENST00000589550 PPP1R37O75864 691 aa10.32□□□□□ -0.76
PIK3C3-211ENST00000589550 HOMEZQ8IX15 550 aa10.32□□□□□ -0.76
PIK3C3-211ENST00000589550 SEMA3EO15041 775 aa10.31□□□□□ -0.76
PIK3C3-211ENST00000589550 EFCAB3Q8N7B9 438 aa10.3□□□□□ -0.76
PIK3C3-211ENST00000589550 SLC24A3Q9HC58 644 aa10.29□□□□□ -0.76
PIK3C3-211ENST00000589550 DAXXQ9UER7 740 aaPredicted RBP10.29□□□□□ -0.76
PIK3C3-211ENST00000589550 CABP2Q9NPB3 220 aa10.28□□□□□ -0.76
PIK3C3-211ENST00000589550 POTEB2H3BUK9 544 aa10.27□□□□□ -0.77
PIK3C3-211ENST00000589550 ASTLQ6HA08 431 aaPredicted RBP10.27□□□□□ -0.77
PIK3C3-211ENST00000589550 PHF8Q9UPP1 1060 aa10.27□□□□□ -0.77
PIK3C3-211ENST00000589550 ARIH1Q9Y4X5 557 aaPredicted RBP10.27□□□□□ -0.77
PIK3C3-211ENST00000589550 ZMYND10O75800 440 aa10.26□□□□□ -0.77
PIK3C3-211ENST00000589550 PDE4AP27815 886 aa10.26□□□□□ -0.77
PIK3C3-211ENST00000589550 IFNL1Q8IU54 200 aa10.26□□□□□ -0.77
PIK3C3-211ENST00000589550 MFSD10Q14728 455 aa10.25□□□□□ -0.77
PIK3C3-211ENST00000589550 SLC39A7Q92504 469 aa10.25□□□□□ -0.77
PIK3C3-211ENST00000589550 NCKAP5LQ9HCH0 1330 aa10.24□□□□□ -0.77
PIK3C3-211ENST00000589550 C7P10643 843 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms