RNA–Protein interactions for RNA: ENST00000588782.1

LINC01028-202, Transcript of long intergenic non-protein coding RNA 1028, humanhuman

TSL 3 BASIC

Gene LINC01028, Length 458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01028-202ENST00000588782 FKBP8Q14318 412 aa9.81□□□□□ -0.84
LINC01028-202ENST00000588782 CCDC61Q9Y6R9 512 aa9.81□□□□□ -0.84
LINC01028-202ENST00000588782 ASTLQ6HA08 431 aaPredicted RBP9.78□□□□□ -0.84
LINC01028-202ENST00000588782 MS4A3Q96HJ5 214 aa9.78□□□□□ -0.84
LINC01028-202ENST00000588782 DNAJC5Q9H3Z4 198 aa9.77□□□□□ -0.85
LINC01028-202ENST00000588782 KIF12Q96FN5 646 aa9.76□□□□□ -0.85
LINC01028-202ENST00000588782 C7P10643 843 aa9.75□□□□□ -0.85
LINC01028-202ENST00000588782 SLC39A7Q92504 469 aa9.75□□□□□ -0.85
LINC01028-202ENST00000588782 FBXO3Q9UK99 471 aa9.75□□□□□ -0.85
LINC01028-202ENST00000588782 RASEFQ8IZ41 740 aa9.74□□□□□ -0.85
LINC01028-202ENST00000588782 ATMINO43313 823 aaPredicted RBP9.73□□□□□ -0.85
LINC01028-202ENST00000588782 SGIP1Q9BQI5 828 aa9.72□□□□□ -0.85
LINC01028-202ENST00000588782 PELP1Q8IZL8 1130 aaKnown RBP9.7□□□□□ -0.86
LINC01028-202ENST00000588782 MAP3K13O43283 966 aa9.68□□□□□ -0.86
LINC01028-202ENST00000588782 NUBP1P53384 320 aa9.68□□□□□ -0.86
LINC01028-202ENST00000588782 METRNQ9UJH8 293 aa9.68□□□□□ -0.86
LINC01028-202ENST00000588782 TIE1P35590 1138 aa9.67□□□□□ -0.86
LINC01028-202ENST00000588782 FAM212AQ96EL1 285 aa9.67□□□□□ -0.86
LINC01028-202ENST00000588782 MAMSTRQ6ZN01 415 aa9.65□□□□□ -0.86
LINC01028-202ENST00000588782 OTUD5Q96G74 571 aa9.65□□□□□ -0.86
LINC01028-202ENST00000588782 POTEB2H3BUK9 544 aa9.63□□□□□ -0.87
LINC01028-202ENST00000588782 ATN1P54259 1190 aaPredicted RBP9.63□□□□□ -0.87
LINC01028-202ENST00000588782 BMP2KQ9NSY1 1161 aaPredicted RBP9.63□□□□□ -0.87
LINC01028-202ENST00000588782 PCDHB13Q9Y5F0 798 aa9.61□□□□□ -0.87
LINC01028-202ENST00000588782 TTLL13PA6NNM8 815 aa9.57□□□□□ -0.88
LINC01028-202ENST00000588782 IER5LQ5T953 404 aa9.56□□□□□ -0.88
LINC01028-202ENST00000588782 DCAF8Q5TAQ9 597 aa9.55□□□□□ -0.88
LINC01028-202ENST00000588782 SCUBE2Q9NQ36 999 aa9.55□□□□□ -0.88
LINC01028-202ENST00000588782 TRPC6Q9Y210 931 aa9.55□□□□□ -0.88
LINC01028-202ENST00000588782 SEC24BO95487 1268 aa9.53□□□□□ -0.88
LINC01028-202ENST00000588782 VASPP50552 380 aaPredicted RBP9.53□□□□□ -0.88
LINC01028-202ENST00000588782 IFNL1Q8IU54 200 aa9.53□□□□□ -0.88
LINC01028-202ENST00000588782 GSE1Q14687 1217 aa9.52□□□□□ -0.89
LINC01028-202ENST00000588782 KLHL34Q8N239 644 aa9.52□□□□□ -0.89
LINC01028-202ENST00000588782 TRIM35Q9UPQ4 493 aa9.51□□□□□ -0.89
LINC01028-202ENST00000588782 POTEJP0CG39 1038 aa9.5□□□□□ -0.89
LINC01028-202ENST00000588782 TMEM106CQ9BVX2 250 aa9.48□□□□□ -0.89
LINC01028-202ENST00000588782 CCDC180Q9P1Z9 1646 aa9.47□□□□□ -0.89
LINC01028-202ENST00000588782 POTEFA5A3E0 1075 aa9.47□□□□□ -0.89
LINC01028-202ENST00000588782 PYGBP11216 843 aa9.46□□□□□ -0.9
LINC01028-202ENST00000588782 COLQQ9Y215 455 aaPredicted RBP9.44□□□□□ -0.9
LINC01028-202ENST00000588782 CHRM1P11229 460 aaPredicted RBP9.43□□□□□ -0.9
LINC01028-202ENST00000588782 PLCG2P16885 1265 aa9.42□□□□□ -0.9
LINC01028-202ENST00000588782 ZNF467Q7Z7K2 595 aaPredicted RBP9.42□□□□□ -0.9
LINC01028-202ENST00000588782 PCDH10Q9P2E7 1040 aa9.41□□□□□ -0.9
LINC01028-202ENST00000588782 POTEMA6NI47 508 aa9.4□□□□□ -0.9
LINC01028-202ENST00000588782 POTEGQ6S5H5 508 aa9.38□□□□□ -0.91
LINC01028-202ENST00000588782 SPOCK2Q92563 424 aa9.38□□□□□ -0.91
LINC01028-202ENST00000588782 OCEL1Q9H607 264 aa9.38□□□□□ -0.91
LINC01028-202ENST00000588782 PCDHB8Q9UN66 801 aa9.38□□□□□ -0.91
LINC01028-202ENST00000588782 IRX5P78411 483 aaPredicted RBP9.37□□□□□ -0.91
LINC01028-202ENST00000588782 RB1CC1Q8TDY2 1594 aa9.35□□□□□ -0.91
LINC01028-202ENST00000588782 FAM163AQ96GL9 167 aaPredicted RBP9.34□□□□□ -0.91
LINC01028-202ENST00000588782 GOLGA2Q08379 1002 aa9.33□□□□□ -0.92
LINC01028-202ENST00000588782 IFNLR1Q8IU57 520 aaPredicted RBP9.33□□□□□ -0.92
LINC01028-202ENST00000588782 MKRN3Q13064 507 aaKnown RBP9.3□□□□□ -0.92
LINC01028-202ENST00000588782 SLAIN1Q8ND83 568 aa9.3□□□□□ -0.92
LINC01028-202ENST00000588782 PLSCR2Q9NRY7 297 aa9.3□□□□□ -0.92
LINC01028-202ENST00000588782 TRIM41Q8WV44 630 aa9.29□□□□□ -0.92
LINC01028-202ENST00000588782 PSEN1P49768 467 aa9.28□□□□□ -0.92
LINC01028-202ENST00000588782 CIZ1Q9ULV3 898 aaPredicted RBP9.28□□□□□ -0.92
LINC01028-202ENST00000588782 PDAP1Q13442 181 aaKnown RBP9.27□□□□□ -0.93
LINC01028-202ENST00000588782 LCE2DQ5TA82 110 aaPredicted RBP9.26□□□□□ -0.93
LINC01028-202ENST00000588782 L3MBTL3Q96JM7 780 aaPredicted RBP9.26□□□□□ -0.93
LINC01028-202ENST00000588782 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.25□□□□□ -0.93
LINC01028-202ENST00000588782 SNPHO15079 494 aa9.24□□□□□ -0.93
LINC01028-202ENST00000588782 PDCD7Q8N8D1 485 aaKnown RBP9.21□□□□□ -0.94
LINC01028-202ENST00000588782 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.21□□□□□ -0.94
LINC01028-202ENST00000588782 CECR2Q9BXF3 1484 aa9.2□□□□□ -0.94
LINC01028-202ENST00000588782 C3orf67Q6ZVT6 689 aa9.19□□□□□ -0.94
LINC01028-202ENST00000588782 ILDR1Q86SU0 546 aaPredicted RBP9.19□□□□□ -0.94
LINC01028-202ENST00000588782 TMEM121BQ9BXQ6 578 aaPredicted RBP9.18□□□□□ -0.94
LINC01028-202ENST00000588782 NACADO15069 1562 aa9.17□□□□□ -0.94
LINC01028-202ENST00000588782 ST18O60284 1047 aa9.16□□□□□ -0.94
LINC01028-202ENST00000588782 CABP2Q9NPB3 220 aa9.14□□□□□ -0.95
LINC01028-202ENST00000588782 G3V3G9 751 aa9.13□□□□□ -0.95
LINC01028-202ENST00000588782 CDAN1Q8IWY9 1227 aa9.11□□□□□ -0.95
LINC01028-202ENST00000588782 BOLA1Q9Y3E2 137 aa9.1□□□□□ -0.95
LINC01028-202ENST00000588782 BICRAQ9NZM4 1560 aa9.09□□□□□ -0.95
LINC01028-202ENST00000588782 CC2D2AQ9P2K1 1620 aa9.09□□□□□ -0.95
LINC01028-202ENST00000588782 RIOK3O14730 519 aaKnown RBP9.07□□□□□ -0.96
LINC01028-202ENST00000588782 TAOK2Q9UL54 1235 aa9.07□□□□□ -0.96
LINC01028-202ENST00000588782 VGFO15240 615 aaPredicted RBP9.05□□□□□ -0.96
LINC01028-202ENST00000588782 SOX12O15370 315 aa9.05□□□□□ -0.96
LINC01028-202ENST00000588782 DPY19L2Q6NUT2 758 aa9.04□□□□□ -0.96
LINC01028-202ENST00000588782 UNC13AQ9UPW8 1703 aa9.03□□□□□ -0.96
LINC01028-202ENST00000588782 EFCAB3Q8N7B9 438 aa9.03□□□□□ -0.96
LINC01028-202ENST00000588782 CUX2O14529 1486 aa9.01□□□□□ -0.97
LINC01028-202ENST00000588782 DCAF8L2P0C7V8 631 aa9□□□□□ -0.97
LINC01028-202ENST00000588782 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.98□□□□□ -0.97
LINC01028-202ENST00000588782 EMP3P54852 163 aa8.98□□□□□ -0.97
LINC01028-202ENST00000588782 MARVELD3Q96A59 401 aa8.98□□□□□ -0.97
LINC01028-202ENST00000588782 ZFP91Q96JP5 570 aaPredicted RBP8.98□□□□□ -0.97
LINC01028-202ENST00000588782 SHROOM4Q9ULL8 1493 aa8.97□□□□□ -0.97
LINC01028-202ENST00000588782 RNF25Q96BH1 459 aaPredicted RBP8.97□□□□□ -0.97
LINC01028-202ENST00000588782 DOK7Q18PE1 504 aa8.96□□□□□ -0.98
LINC01028-202ENST00000588782 ZNF710Q8N1W2 664 aa8.94□□□□□ -0.98
LINC01028-202ENST00000588782 RIMBP2O15034 1052 aa8.93□□□□□ -0.98
LINC01028-202ENST00000588782 MICALL2Q8IY33 904 aa8.93□□□□□ -0.98
LINC01028-202ENST00000588782 EIF4G1Q04637 1599 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms