RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 CECR2Q9BXF3 1484 aa8.96□□□□□ -0.98
AP000547.3-204ENST00000588548 BRPF3Q9ULD4 1205 aa8.94□□□□□ -0.98
AP000547.3-204ENST00000588548 NACADO15069 1562 aa8.94□□□□□ -0.98
AP000547.3-204ENST00000588548 FAM43AQ8N2R8 423 aa8.91□□□□□ -0.98
AP000547.3-204ENST00000588548 USP35Q9P2H5 1018 aa8.91□□□□□ -0.98
AP000547.3-204ENST00000588548 RB1CC1Q8TDY2 1594 aa8.91□□□□□ -0.98
AP000547.3-204ENST00000588548 RRP9O43818 475 aaKnown RBP8.9□□□□□ -0.98
AP000547.3-204ENST00000588548 SLC4A1APQ9BWU0 796 aaKnown RBP8.89□□□□□ -0.99
AP000547.3-204ENST00000588548 MROH2BQ7Z745 1585 aa8.89□□□□□ -0.99
AP000547.3-204ENST00000588548 HSP90AA2PQ14568 343 aaPredicted RBP8.88□□□□□ -0.99
AP000547.3-204ENST00000588548 KCNH8Q96L42 1107 aa8.88□□□□□ -0.99
AP000547.3-204ENST00000588548 IPO9Q96P70 1041 aaKnown RBP8.87□□□□□ -0.99
AP000547.3-204ENST00000588548 FOXD1Q16676 465 aa8.86□□□□□ -0.99
AP000547.3-204ENST00000588548 PABPN1Q86U42 306 aaKnown RBP eCLIP8.86□□□□□ -0.99
AP000547.3-204ENST00000588548 NEFMP07197 916 aa8.85□□□□□ -0.99
AP000547.3-204ENST00000588548 ZBTB47Q9UFB7 747 aaPredicted RBP8.84□□□□□ -0.99
AP000547.3-204ENST00000588548 RSPH4AQ5TD94 716 aa8.83□□□□□ -1
AP000547.3-204ENST00000588548 PRDM4Q9UKN5 801 aa8.83□□□□□ -1
AP000547.3-204ENST00000588548 WIZO95785 1651 aa8.83□□□□□ -1
AP000547.3-204ENST00000588548 ANP32AP39687 249 aaKnown RBP8.81□□□□□ -1
AP000547.3-204ENST00000588548 GSE1Q14687 1217 aa8.8□□□□□ -1
AP000547.3-204ENST00000588548 NAP1L2Q9ULW6 460 aaPredicted RBP8.8□□□□□ -1
AP000547.3-204ENST00000588548 CALD1Q05682 793 aaKnown RBP8.79□□□□□ -1
AP000547.3-204ENST00000588548 PAXIP1Q6ZW49 1069 aaPredicted RBP8.79□□□□□ -1
AP000547.3-204ENST00000588548 PPP4R2Q9NY27 417 aa8.79□□□□□ -1
AP000547.3-204ENST00000588548 HSP90AA1P07900 732 aaKnown RBP8.78□□□□□ -1
AP000547.3-204ENST00000588548 ZNF326Q5BKZ1 582 aaKnown RBP8.78□□□□□ -1
AP000547.3-204ENST00000588548 WRNQ14191 1432 aaPredicted RBP eCLIP8.77□□□□□ -1
AP000547.3-204ENST00000588548 ZBTB22O15209 634 aa8.77□□□□□ -1.01
AP000547.3-204ENST00000588548 CENPJQ9HC77 1338 aaPredicted RBP8.77□□□□□ -1.01
AP000547.3-204ENST00000588548 PPM1GO15355 546 aaPredicted RBP8.76□□□□□ -1.01
AP000547.3-204ENST00000588548 BBXQ8WY36 941 aaPredicted RBP8.75□□□□□ -1.01
AP000547.3-204ENST00000588548 GTF2E1P29083 439 aaPredicted RBP8.75□□□□□ -1.01
AP000547.3-204ENST00000588548 IPO4Q8TEX9 1081 aaKnown RBP8.74□□□□□ -1.01
AP000547.3-204ENST00000588548 NAP1L5Q96NT1 182 aaPredicted RBP8.73□□□□□ -1.01
AP000547.3-204ENST00000588548 BRD2P25440 801 aaKnown RBP8.73□□□□□ -1.01
AP000547.3-204ENST00000588548 RGS3P49796 1198 aa8.73□□□□□ -1.01
AP000547.3-204ENST00000588548 CHMP4BQ9H444 224 aaKnown RBP8.73□□□□□ -1.01
AP000547.3-204ENST00000588548 UNC13AQ9UPW8 1703 aa8.72□□□□□ -1.01
AP000547.3-204ENST00000588548 FRAT1Q92837 279 aaPredicted RBP8.72□□□□□ -1.01
AP000547.3-204ENST00000588548 RRAGDQ9NQL2 400 aaPredicted RBP8.72□□□□□ -1.01
AP000547.3-204ENST00000588548 IRX6P78412 446 aaPredicted RBP8.71□□□□□ -1.02
AP000547.3-204ENST00000588548 TRIM52Q96A61 297 aa8.71□□□□□ -1.02
AP000547.3-204ENST00000588548 LAS1LQ9Y4W2 734 aaKnown RBP8.71□□□□□ -1.02
AP000547.3-204ENST00000588548 BAZ1AQ9NRL2 1556 aaPredicted RBP8.71□□□□□ -1.02
AP000547.3-204ENST00000588548 STAC3Q96MF2 364 aa8.7□□□□□ -1.02
AP000547.3-204ENST00000588548 CCER2I3L3R5 266 aa8.7□□□□□ -1.02
AP000547.3-204ENST00000588548 DCAF11Q8TEB1 546 aa8.69□□□□□ -1.02
AP000547.3-204ENST00000588548 CHMP4AQ9BY43 222 aa8.69□□□□□ -1.02
AP000547.3-204ENST00000588548 DHX37Q8IY37 1157 aaKnown RBP8.69□□□□□ -1.02
AP000547.3-204ENST00000588548 CANXP27824 592 aaKnown RBP8.68□□□□□ -1.02
AP000547.3-204ENST00000588548 PDCL3Q9H2J4 239 aa8.68□□□□□ -1.02
AP000547.3-204ENST00000588548 SMARCA4P51532 1647 aa8.67□□□□□ -1.02
AP000547.3-204ENST00000588548 EEA1Q15075 1411 aa8.67□□□□□ -1.02
AP000547.3-204ENST00000588548 B4GALNT3Q6L9W6 998 aa8.65□□□□□ -1.02
AP000547.3-204ENST00000588548 EIF4G1Q04637 1599 aaKnown RBP8.65□□□□□ -1.02
AP000547.3-204ENST00000588548 BICRAQ9NZM4 1560 aa8.65□□□□□ -1.02
AP000547.3-204ENST00000588548 PNNQ9H307 717 aaKnown RBP8.65□□□□□ -1.02
AP000547.3-204ENST00000588548 CCDC88BA6NC98 1476 aa8.65□□□□□ -1.03
AP000547.3-204ENST00000588548 DNAJC5BQ9UF47 199 aa8.63□□□□□ -1.03
AP000547.3-204ENST00000588548 TOP2AP11388 1531 aaKnown RBP8.63□□□□□ -1.03
AP000547.3-204ENST00000588548 ABCC8Q09428 1581 aa8.63□□□□□ -1.03
AP000547.3-204ENST00000588548 CLCN1P35523 988 aa8.62□□□□□ -1.03
AP000547.3-204ENST00000588548 CNGB1Q14028 1251 aaPredicted RBP8.62□□□□□ -1.03
AP000547.3-204ENST00000588548 NFKBIBQ15653 356 aa8.62□□□□□ -1.03
AP000547.3-204ENST00000588548 HOMEZQ8IX15 550 aa8.62□□□□□ -1.03
AP000547.3-204ENST00000588548 SMARCA2P51531 1590 aa8.61□□□□□ -1.03
AP000547.3-204ENST00000588548 SAMD1Q6SPF0 538 aaPredicted RBP8.61□□□□□ -1.03
AP000547.3-204ENST00000588548 ZFP91Q96JP5 570 aaPredicted RBP8.61□□□□□ -1.03
AP000547.3-204ENST00000588548 CHRM1P11229 460 aaPredicted RBP8.6□□□□□ -1.03
AP000547.3-204ENST00000588548 PPP4R3CPQ6ZMV5 832 aa8.6□□□□□ -1.03
AP000547.3-204ENST00000588548 FTSJ3Q8IY81 847 aaKnown RBP8.6□□□□□ -1.03
AP000547.3-204ENST00000588548 HNRNPUL2Q1KMD3 747 aaKnown RBP8.6□□□□□ -1.03
AP000547.3-204ENST00000588548 NCAPD3P42695 1498 aa8.59□□□□□ -1.03
AP000547.3-204ENST00000588548 TEX2Q8IWB9 1127 aa8.59□□□□□ -1.03
AP000547.3-204ENST00000588548 NCLP19338 710 aaKnown RBP8.59□□□□□ -1.03
AP000547.3-204ENST00000588548 SMAP1Q8IYB5 467 aaPredicted RBP8.58□□□□□ -1.04
AP000547.3-204ENST00000588548 DHX57Q6P158 1386 aaKnown RBP8.58□□□□□ -1.04
AP000547.3-204ENST00000588548 TPM2P07951 284 aa8.57□□□□□ -1.04
AP000547.3-204ENST00000588548 PPP1R15AO75807 674 aaPredicted RBP8.57□□□□□ -1.04
AP000547.3-204ENST00000588548 DDX10Q13206 875 aaKnown RBP8.56□□□□□ -1.04
AP000547.3-204ENST00000588548 TMEM51Q9NW97 253 aa8.56□□□□□ -1.04
AP000547.3-204ENST00000588548 SECISBP2LQ93073 1101 aaKnown RBP8.55□□□□□ -1.04
AP000547.3-204ENST00000588548 ZNF830Q96NB3 372 aaPredicted RBP8.55□□□□□ -1.04
AP000547.3-204ENST00000588548 DDRGK1Q96HY6 314 aa8.55□□□□□ -1.04
AP000547.3-204ENST00000588548 SOGA1O94964 1423 aa8.54□□□□□ -1.04
AP000547.3-204ENST00000588548 ANP32CO43423 234 aa8.54□□□□□ -1.04
AP000547.3-204ENST00000588548 NPM3O75607 178 aaKnown RBP8.53□□□□□ -1.04
AP000547.3-204ENST00000588548 NPM2Q86SE8 214 aaKnown RBP8.53□□□□□ -1.04
AP000547.3-204ENST00000588548 RUSC2Q8N2Y8 1516 aa8.53□□□□□ -1.04
AP000547.3-204ENST00000588548 TULP1O00294 542 aaPredicted RBP8.53□□□□□ -1.04
AP000547.3-204ENST00000588548 HNRNPUQ00839 825 aaKnown RBP eCLIP8.53□□□□□ -1.04
AP000547.3-204ENST00000588548 UTP14CQ5TAP6 766 aaKnown RBP8.53□□□□□ -1.04
AP000547.3-204ENST00000588548 CEP162Q5TB80 1403 aa8.53□□□□□ -1.04
AP000547.3-204ENST00000588548 L1TD1Q5T7N2 865 aaKnown RBP8.52□□□□□ -1.04
AP000547.3-204ENST00000588548 BCCIPQ9P287 314 aaKnown RBP eCLIP8.52□□□□□ -1.04
AP000547.3-204ENST00000588548 ARID4BQ4LE39 1312 aaPredicted RBP8.52□□□□□ -1.05
AP000547.3-204ENST00000588548 ZHX1Q9UKY1 873 aaPredicted RBP8.51□□□□□ -1.05
AP000547.3-204ENST00000588548 MAP7D2Q96T17 732 aa8.51□□□□□ -1.05
AP000547.3-204ENST00000588548 HAP1P54257 671 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms