RNA–Protein interactions for RNA: ENST00000588236.1

SPIRE1-212, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2

Gene SPIRE1, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-212ENST00000588236 FXR2P51116 673 aaKnown RBP eCLIP8.03□□□□□ -1.12
SPIRE1-212ENST00000588236 FARP1Q9Y4F1 1045 aaPredicted RBP8.03□□□□□ -1.12
SPIRE1-212ENST00000588236 RIOK3O14730 519 aaKnown RBP8.01□□□□□ -1.13
SPIRE1-212ENST00000588236 PAK3O75914 559 aaPredicted RBP8.01□□□□□ -1.13
SPIRE1-212ENST00000588236 CHRDL2Q6WN34 429 aa8.01□□□□□ -1.13
SPIRE1-212ENST00000588236 PRKAR2AP13861 404 aaKnown RBP8□□□□□ -1.13
SPIRE1-212ENST00000588236 VGFO15240 615 aaPredicted RBP7.99□□□□□ -1.13
SPIRE1-212ENST00000588236 RASEFQ8IZ41 740 aa7.99□□□□□ -1.13
SPIRE1-212ENST00000588236 DNAJC5Q9H3Z4 198 aa7.99□□□□□ -1.13
SPIRE1-212ENST00000588236 HS6ST3Q8IZP7 471 aa7.98□□□□□ -1.13
SPIRE1-212ENST00000588236 SGIP1Q9BQI5 828 aa7.98□□□□□ -1.13
SPIRE1-212ENST00000588236 CHGAP10645 457 aaKnown RBP7.97□□□□□ -1.13
SPIRE1-212ENST00000588236 SPRYD3Q8NCJ5 442 aa7.97□□□□□ -1.13
SPIRE1-212ENST00000588236 RYDENQ9NUL5 291 aaKnown RBP7.96□□□□□ -1.14
SPIRE1-212ENST00000588236 CHADLQ6NUI6 762 aa7.95□□□□□ -1.14
SPIRE1-212ENST00000588236 ZNF467Q7Z7K2 595 aaPredicted RBP7.95□□□□□ -1.14
SPIRE1-212ENST00000588236 VSIG10Q8N0Z9 540 aa7.93□□□□□ -1.14
SPIRE1-212ENST00000588236 HAP1P54257 671 aaPredicted RBP7.92□□□□□ -1.14
SPIRE1-212ENST00000588236 PIP4P2Q8N4L2 257 aa7.92□□□□□ -1.14
SPIRE1-212ENST00000588236 TSPYL2Q9H2G4 693 aaPredicted RBP7.91□□□□□ -1.14
SPIRE1-212ENST00000588236 PYGBP11216 843 aa7.9□□□□□ -1.14
SPIRE1-212ENST00000588236 PAXIP1Q6ZW49 1069 aaPredicted RBP7.9□□□□□ -1.14
SPIRE1-212ENST00000588236 RNF25Q96BH1 459 aaPredicted RBP7.9□□□□□ -1.14
SPIRE1-212ENST00000588236 STK25O00506 426 aa7.88□□□□□ -1.15
SPIRE1-212ENST00000588236 CFAP44Q96MT7 982 aa7.88□□□□□ -1.15
SPIRE1-212ENST00000588236 ZNF579Q8NAF0 562 aaKnown RBP7.87□□□□□ -1.15
SPIRE1-212ENST00000588236 PDAP1Q13442 181 aaKnown RBP7.86□□□□□ -1.15
SPIRE1-212ENST00000588236 CCDC61Q9Y6R9 512 aa7.86□□□□□ -1.15
SPIRE1-212ENST00000588236 CLCN6P51797 869 aa7.83□□□□□ -1.16
SPIRE1-212ENST00000588236 STK24Q9Y6E0 443 aa7.83□□□□□ -1.16
SPIRE1-212ENST00000588236 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.82□□□□□ -1.16
SPIRE1-212ENST00000588236 ZFP91Q96JP5 570 aaPredicted RBP7.82□□□□□ -1.16
SPIRE1-212ENST00000588236 BCL11BQ9C0K0 894 aaPredicted RBP7.82□□□□□ -1.16
SPIRE1-212ENST00000588236 CD44P16070 742 aaKnown RBP7.8□□□□□ -1.16
SPIRE1-212ENST00000588236 PCDHB13Q9Y5F0 798 aa7.8□□□□□ -1.16
SPIRE1-212ENST00000588236 KIF12Q96FN5 646 aa7.78□□□□□ -1.16
SPIRE1-212ENST00000588236 ZRANB1Q9UGI0 708 aa7.78□□□□□ -1.16
SPIRE1-212ENST00000588236 PSEN1P49768 467 aa7.77□□□□□ -1.17
SPIRE1-212ENST00000588236 GTPBP6O43824 516 aaPredicted RBP7.75□□□□□ -1.17
SPIRE1-212ENST00000588236 C19orf67A6NJJ6 358 aa7.74□□□□□ -1.17
SPIRE1-212ENST00000588236 MAP3K13O43283 966 aa7.74□□□□□ -1.17
SPIRE1-212ENST00000588236 BCANQ96GW7 911 aa7.74□□□□□ -1.17
SPIRE1-212ENST00000588236 PCDHB8Q9UN66 801 aa7.74□□□□□ -1.17
SPIRE1-212ENST00000588236 SOX12O15370 315 aa7.73□□□□□ -1.17
SPIRE1-212ENST00000588236 NKX1-1Q15270 411 aaPredicted RBP7.73□□□□□ -1.17
SPIRE1-212ENST00000588236 IFNL1Q8IU54 200 aa7.72□□□□□ -1.17
SPIRE1-212ENST00000588236 TSHZ2Q9NRE2 1034 aa7.71□□□□□ -1.18
SPIRE1-212ENST00000588236 NLRP6P59044 892 aa7.69□□□□□ -1.18
SPIRE1-212ENST00000588236 GOLGA2Q08379 1002 aa7.69□□□□□ -1.18
SPIRE1-212ENST00000588236 KDM2AQ9Y2K7 1162 aa7.66□□□□□ -1.18
SPIRE1-212ENST00000588236 TIE1P35590 1138 aa7.65□□□□□ -1.18
SPIRE1-212ENST00000588236 PHF12Q96QT6 1004 aa7.65□□□□□ -1.18
SPIRE1-212ENST00000588236 CABP2Q9NPB3 220 aa7.64□□□□□ -1.19
SPIRE1-212ENST00000588236 HAX1O00165 279 aa7.63□□□□□ -1.19
SPIRE1-212ENST00000588236 MKRN3Q13064 507 aaKnown RBP7.62□□□□□ -1.19
SPIRE1-212ENST00000588236 TMEM106CQ9BVX2 250 aa7.62□□□□□ -1.19
SPIRE1-212ENST00000588236 P3H3Q8IVL6 736 aa7.61□□□□□ -1.19
SPIRE1-212ENST00000588236 EFCAB3Q8N7B9 438 aa7.61□□□□□ -1.19
SPIRE1-212ENST00000588236 MFRPQ9BY79 579 aa7.61□□□□□ -1.19
SPIRE1-212ENST00000588236 WDR70Q9NW82 654 aa7.61□□□□□ -1.19
SPIRE1-212ENST00000588236 MS4A3Q96HJ5 214 aa7.59□□□□□ -1.19
SPIRE1-212ENST00000588236 NBR1Q14596 966 aa7.58□□□□□ -1.2
SPIRE1-212ENST00000588236 FBXO22Q8NEZ5 403 aa7.57□□□□□ -1.2
SPIRE1-212ENST00000588236 TTLL13PA6NNM8 815 aa7.54□□□□□ -1.2
SPIRE1-212ENST00000588236 PHF8Q9UPP1 1060 aa7.54□□□□□ -1.2
SPIRE1-212ENST00000588236 IER5LQ5T953 404 aa7.53□□□□□ -1.2
SPIRE1-212ENST00000588236 PDE4AP27815 886 aa7.52□□□□□ -1.21
SPIRE1-212ENST00000588236 ILDR1Q86SU0 546 aaPredicted RBP7.51□□□□□ -1.21
SPIRE1-212ENST00000588236 BMP2KQ9NSY1 1161 aaPredicted RBP7.51□□□□□ -1.21
SPIRE1-212ENST00000588236 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.51□□□□□ -1.21
SPIRE1-212ENST00000588236 GALR2O43603 387 aaPredicted RBP7.49□□□□□ -1.21
SPIRE1-212ENST00000588236 TRIM35Q9UPQ4 493 aa7.49□□□□□ -1.21
SPIRE1-212ENST00000588236 ASTLQ6HA08 431 aaPredicted RBP7.48□□□□□ -1.21
SPIRE1-212ENST00000588236 G3V3G9 751 aa7.47□□□□□ -1.21
SPIRE1-212ENST00000588236 TULP1O00294 542 aaPredicted RBP7.47□□□□□ -1.21
SPIRE1-212ENST00000588236 PPP1R37O75864 691 aa7.46□□□□□ -1.22
SPIRE1-212ENST00000588236 OCEL1Q9H607 264 aa7.46□□□□□ -1.22
SPIRE1-212ENST00000588236 TRPC6Q9Y210 931 aa7.46□□□□□ -1.22
SPIRE1-212ENST00000588236 ATMINO43313 823 aaPredicted RBP7.45□□□□□ -1.22
SPIRE1-212ENST00000588236 E2F4Q16254 413 aa7.45□□□□□ -1.22
SPIRE1-212ENST00000588236 SP7Q8TDD2 431 aaPredicted RBP7.45□□□□□ -1.22
SPIRE1-212ENST00000588236 ARHGEF1Q92888 912 aaKnown RBP7.45□□□□□ -1.22
SPIRE1-212ENST00000588236 MS4A4AQ96JQ5 239 aa7.45□□□□□ -1.22
SPIRE1-212ENST00000588236 DCBLD2Q96PD2 775 aa7.45□□□□□ -1.22
SPIRE1-212ENST00000588236 L3MBTL3Q96JM7 780 aaPredicted RBP7.44□□□□□ -1.22
SPIRE1-212ENST00000588236 GABBR2O75899 941 aa7.43□□□□□ -1.22
SPIRE1-212ENST00000588236 CADPS2Q86UW7 1296 aa7.43□□□□□ -1.22
SPIRE1-212ENST00000588236 PLCG2P16885 1265 aa7.42□□□□□ -1.22
SPIRE1-212ENST00000588236 ATN1P54259 1190 aaPredicted RBP7.42□□□□□ -1.22
SPIRE1-212ENST00000588236 EVX2Q03828 476 aa7.42□□□□□ -1.22
SPIRE1-212ENST00000588236 MFSD10Q14728 455 aa7.42□□□□□ -1.22
SPIRE1-212ENST00000588236 DDX27Q96GQ7 796 aaKnown RBP7.42□□□□□ -1.22
SPIRE1-212ENST00000588236 CRISPLD2Q9H0B8 497 aa7.42□□□□□ -1.22
SPIRE1-212ENST00000588236 LARP6Q9BRS8 491 aaKnown RBP7.41□□□□□ -1.22
SPIRE1-212ENST00000588236 ARIH1Q9Y4X5 557 aaPredicted RBP7.41□□□□□ -1.22
SPIRE1-212ENST00000588236 C7P10643 843 aa7.4□□□□□ -1.22
SPIRE1-212ENST00000588236 IRX5P78411 483 aaPredicted RBP7.4□□□□□ -1.22
SPIRE1-212ENST00000588236 SLC39A7Q92504 469 aa7.4□□□□□ -1.22
SPIRE1-212ENST00000588236 GPHNQ9NQX3 736 aaPredicted RBP7.4□□□□□ -1.22
SPIRE1-212ENST00000588236 SEC24BO95487 1268 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms