RNA–Protein interactions for RNA: ENST00000587476.1

TUBD1-207, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 825 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-207ENST00000587476 GSE1Q14687 1217 aa10.21□□□□□ -0.77
TUBD1-207ENST00000587476 SPDYE1Q8NFV5 336 aaPredicted RBP10.2□□□□□ -0.78
TUBD1-207ENST00000587476 TSHZ2Q9NRE2 1034 aa10.2□□□□□ -0.78
TUBD1-207ENST00000587476 HS6ST3Q8IZP7 471 aa10.19□□□□□ -0.78
TUBD1-207ENST00000587476 CLEC11AQ9Y240 323 aa10.19□□□□□ -0.78
TUBD1-207ENST00000587476 PIP4P2Q8N4L2 257 aa10.14□□□□□ -0.79
TUBD1-207ENST00000587476 TPRNQ4KMQ1 711 aa10.13□□□□□ -0.79
TUBD1-207ENST00000587476 DNAJC5Q9H3Z4 198 aa10.13□□□□□ -0.79
TUBD1-207ENST00000587476 NUBP1P53384 320 aa10.11□□□□□ -0.79
TUBD1-207ENST00000587476 FXR2P51116 673 aaKnown RBP eCLIP10.1□□□□□ -0.79
TUBD1-207ENST00000587476 RNF25Q96BH1 459 aaPredicted RBP10.1□□□□□ -0.79
TUBD1-207ENST00000587476 DCAF8Q5TAQ9 597 aa10.09□□□□□ -0.79
TUBD1-207ENST00000587476 RIOK3O14730 519 aaKnown RBP10.08□□□□□ -0.8
TUBD1-207ENST00000587476 NBR1Q14596 966 aa10.06□□□□□ -0.8
TUBD1-207ENST00000587476 FAM212AQ96EL1 285 aa10.06□□□□□ -0.8
TUBD1-207ENST00000587476 PRR29P0C7W0 189 aa10.04□□□□□ -0.8
TUBD1-207ENST00000587476 VGFO15240 615 aaPredicted RBP10.02□□□□□ -0.81
TUBD1-207ENST00000587476 PRKAR2AP13861 404 aaKnown RBP10.01□□□□□ -0.81
TUBD1-207ENST00000587476 STK25O00506 426 aa10□□□□□ -0.81
TUBD1-207ENST00000587476 CREBZFQ9NS37 354 aa10□□□□□ -0.81
TUBD1-207ENST00000587476 NKX1-1Q15270 411 aaPredicted RBP9.99□□□□□ -0.81
TUBD1-207ENST00000587476 CHRM1P11229 460 aaPredicted RBP9.98□□□□□ -0.81
TUBD1-207ENST00000587476 CHADLQ6NUI6 762 aa9.97□□□□□ -0.81
TUBD1-207ENST00000587476 GTPBP6O43824 516 aaPredicted RBP9.96□□□□□ -0.82
TUBD1-207ENST00000587476 MNX1P50219 401 aaPredicted RBP9.96□□□□□ -0.82
TUBD1-207ENST00000587476 SGIP1Q9BQI5 828 aa9.95□□□□□ -0.82
TUBD1-207ENST00000587476 RYDENQ9NUL5 291 aaKnown RBP9.95□□□□□ -0.82
TUBD1-207ENST00000587476 RASEFQ8IZ41 740 aa9.92□□□□□ -0.82
TUBD1-207ENST00000587476 STK24Q9Y6E0 443 aa9.91□□□□□ -0.82
TUBD1-207ENST00000587476 BCL11BQ9C0K0 894 aaPredicted RBP9.9□□□□□ -0.82
TUBD1-207ENST00000587476 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.89□□□□□ -0.83
TUBD1-207ENST00000587476 ZFP91Q96JP5 570 aaPredicted RBP9.89□□□□□ -0.83
TUBD1-207ENST00000587476 HAX1O00165 279 aa9.88□□□□□ -0.83
TUBD1-207ENST00000587476 PYGBP11216 843 aa9.86□□□□□ -0.83
TUBD1-207ENST00000587476 FARP1Q9Y4F1 1045 aaPredicted RBP9.82□□□□□ -0.84
TUBD1-207ENST00000587476 P3H3Q8IVL6 736 aa9.8□□□□□ -0.84
TUBD1-207ENST00000587476 ZNF467Q7Z7K2 595 aaPredicted RBP9.79□□□□□ -0.84
TUBD1-207ENST00000587476 EVX2Q03828 476 aa9.78□□□□□ -0.84
TUBD1-207ENST00000587476 C19orf67A6NJJ6 358 aa9.77□□□□□ -0.85
TUBD1-207ENST00000587476 SP7Q8TDD2 431 aaPredicted RBP9.76□□□□□ -0.85
TUBD1-207ENST00000587476 PDAP1Q13442 181 aaKnown RBP9.72□□□□□ -0.85
TUBD1-207ENST00000587476 TSPYL2Q9H2G4 693 aaPredicted RBP9.72□□□□□ -0.85
TUBD1-207ENST00000587476 WDR70Q9NW82 654 aa9.72□□□□□ -0.85
TUBD1-207ENST00000587476 CD44P16070 742 aaKnown RBP9.71□□□□□ -0.86
TUBD1-207ENST00000587476 ZNF579Q8NAF0 562 aaKnown RBP9.65□□□□□ -0.86
TUBD1-207ENST00000587476 PSEN1P49768 467 aa9.64□□□□□ -0.87
TUBD1-207ENST00000587476 KCNV2Q8TDN2 545 aa9.64□□□□□ -0.87
TUBD1-207ENST00000587476 PCDHB8Q9UN66 801 aa9.64□□□□□ -0.87
TUBD1-207ENST00000587476 PCDHB13Q9Y5F0 798 aa9.64□□□□□ -0.87
TUBD1-207ENST00000587476 CADPS2Q86UW7 1296 aa9.63□□□□□ -0.87
TUBD1-207ENST00000587476 ZRANB1Q9UGI0 708 aa9.62□□□□□ -0.87
TUBD1-207ENST00000587476 CCDC61Q9Y6R9 512 aa9.61□□□□□ -0.87
TUBD1-207ENST00000587476 TULP1O00294 542 aaPredicted RBP9.6□□□□□ -0.87
TUBD1-207ENST00000587476 PAK3O75914 559 aaPredicted RBP9.6□□□□□ -0.87
TUBD1-207ENST00000587476 MFRPQ9BY79 579 aa9.6□□□□□ -0.87
TUBD1-207ENST00000587476 LMOD2Q6P5Q4 547 aa9.58□□□□□ -0.88
TUBD1-207ENST00000587476 GABBR2O75899 941 aa9.56□□□□□ -0.88
TUBD1-207ENST00000587476 TMEM132AQ24JP5 1023 aa9.56□□□□□ -0.88
TUBD1-207ENST00000587476 NLRP6P59044 892 aa9.55□□□□□ -0.88
TUBD1-207ENST00000587476 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.55□□□□□ -0.88
TUBD1-207ENST00000587476 GTF3C3Q9Y5Q9 886 aa9.55□□□□□ -0.88
TUBD1-207ENST00000587476 SOX12O15370 315 aa9.54□□□□□ -0.88
TUBD1-207ENST00000587476 ERICH6Q7L0X2 663 aa9.54□□□□□ -0.88
TUBD1-207ENST00000587476 ARHGEF1Q92888 912 aaKnown RBP9.53□□□□□ -0.88
TUBD1-207ENST00000587476 PHF12Q96QT6 1004 aa9.53□□□□□ -0.88
TUBD1-207ENST00000587476 IFNL1Q8IU54 200 aa9.52□□□□□ -0.89
TUBD1-207ENST00000587476 EFCAB3Q8N7B9 438 aa9.52□□□□□ -0.89
TUBD1-207ENST00000587476 E2F4Q16254 413 aa9.51□□□□□ -0.89
TUBD1-207ENST00000587476 FBXO22Q8NEZ5 403 aa9.51□□□□□ -0.89
TUBD1-207ENST00000587476 CABP2Q9NPB3 220 aa9.51□□□□□ -0.89
TUBD1-207ENST00000587476 TIMELESSQ9UNS1 1208 aa9.5□□□□□ -0.89
TUBD1-207ENST00000587476 PPP1R37O75864 691 aa9.49□□□□□ -0.89
TUBD1-207ENST00000587476 MAP3K13O43283 966 aa9.48□□□□□ -0.89
TUBD1-207ENST00000587476 KIF12Q96FN5 646 aa9.48□□□□□ -0.89
TUBD1-207ENST00000587476 PHF8Q9UPP1 1060 aa9.48□□□□□ -0.89
TUBD1-207ENST00000587476 GALR2O43603 387 aaPredicted RBP9.45□□□□□ -0.9
TUBD1-207ENST00000587476 CLCN6P51797 869 aa9.45□□□□□ -0.9
TUBD1-207ENST00000587476 TESPA1A2RU30 521 aaPredicted RBP9.42□□□□□ -0.9
TUBD1-207ENST00000587476 PDE4AP27815 886 aa9.41□□□□□ -0.9
TUBD1-207ENST00000587476 ZC3H15Q8WU90 426 aaKnown RBP9.41□□□□□ -0.9
TUBD1-207ENST00000587476 MS4A3Q96HJ5 214 aa9.41□□□□□ -0.9
TUBD1-207ENST00000587476 SEMA3EO15041 775 aa9.4□□□□□ -0.9
TUBD1-207ENST00000587476 GOLGA2Q08379 1002 aa9.4□□□□□ -0.9
TUBD1-207ENST00000587476 SMYD5Q6GMV2 418 aa9.4□□□□□ -0.9
TUBD1-207ENST00000587476 NCKAP5LQ9HCH0 1330 aa9.39□□□□□ -0.91
TUBD1-207ENST00000587476 LARP6Q9BRS8 491 aaKnown RBP9.39□□□□□ -0.91
TUBD1-207ENST00000587476 BRPF1P55201 1214 aaPredicted RBP9.38□□□□□ -0.91
TUBD1-207ENST00000587476 MFSD10Q14728 455 aa9.38□□□□□ -0.91
TUBD1-207ENST00000587476 DCBLD2Q96PD2 775 aa9.38□□□□□ -0.91
TUBD1-207ENST00000587476 POTEIP0CG38 1075 aa9.37□□□□□ -0.91
TUBD1-207ENST00000587476 DDX27Q96GQ7 796 aaKnown RBP9.36□□□□□ -0.91
TUBD1-207ENST00000587476 CRISPLD2Q9H0B8 497 aa9.36□□□□□ -0.91
TUBD1-207ENST00000587476 ARIH1Q9Y4X5 557 aaPredicted RBP9.36□□□□□ -0.91
TUBD1-207ENST00000587476 MS4A4AQ96JQ5 239 aa9.35□□□□□ -0.91
TUBD1-207ENST00000587476 NEUROD2Q15784 382 aa9.33□□□□□ -0.92
TUBD1-207ENST00000587476 TMEM106CQ9BVX2 250 aa9.32□□□□□ -0.92
TUBD1-207ENST00000587476 SLC24A3Q9HC58 644 aa9.32□□□□□ -0.92
TUBD1-207ENST00000587476 MKRN3Q13064 507 aaKnown RBP9.31□□□□□ -0.92
TUBD1-207ENST00000587476 C14orf37Q86TY3 774 aa9.31□□□□□ -0.92
TUBD1-207ENST00000587476 CAMK2BQ13554 666 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms