RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 SPOCK2Q92563 424 aa13.67□□□□□ -0.22
CACNA1A-208ENST00000587451 GABBR2O75899 941 aa13.64□□□□□ -0.23
CACNA1A-208ENST00000587451 LHX8Q68G74 356 aa13.64□□□□□ -0.23
CACNA1A-208ENST00000587451 DCAF8Q5TAQ9 597 aa13.62□□□□□ -0.23
CACNA1A-208ENST00000587451 CCDC61Q9Y6R9 512 aa13.62□□□□□ -0.23
CACNA1A-208ENST00000587451 PHF12Q96QT6 1004 aa13.61□□□□□ -0.23
CACNA1A-208ENST00000587451 GSE1Q14687 1217 aa13.6□□□□□ -0.23
CACNA1A-208ENST00000587451 CIZ1Q9ULV3 898 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-208ENST00000587451 KIF12Q96FN5 646 aa13.5□□□□□ -0.25
CACNA1A-208ENST00000587451 DCBLD2Q96PD2 775 aa13.48□□□□□ -0.25
CACNA1A-208ENST00000587451 GALR2O43603 387 aaPredicted RBP13.47□□□□□ -0.25
CACNA1A-208ENST00000587451 SGIP1Q9BQI5 828 aa13.47□□□□□ -0.25
CACNA1A-208ENST00000587451 MS4A3Q96HJ5 214 aa13.46□□□□□ -0.25
CACNA1A-208ENST00000587451 MAP3K13O43283 966 aa13.45□□□□□ -0.26
CACNA1A-208ENST00000587451 PCDHB13Q9Y5F0 798 aa13.44□□□□□ -0.26
CACNA1A-208ENST00000587451 PYGBP11216 843 aa13.43□□□□□ -0.26
CACNA1A-208ENST00000587451 TRIM41Q8WV44 630 aa13.42□□□□□ -0.26
CACNA1A-208ENST00000587451 CHRM1P11229 460 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-208ENST00000587451 PLSCR2Q9NRY7 297 aa13.37□□□□□ -0.27
CACNA1A-208ENST00000587451 ZNF467Q7Z7K2 595 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-208ENST00000587451 IFNL1Q8IU54 200 aa13.32□□□□□ -0.28
CACNA1A-208ENST00000587451 TIE1P35590 1138 aa13.31□□□□□ -0.28
CACNA1A-208ENST00000587451 POTEIP0CG38 1075 aa13.27□□□□□ -0.29
CACNA1A-208ENST00000587451 ASTLQ6HA08 431 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-208ENST00000587451 PCDHB8Q9UN66 801 aa13.25□□□□□ -0.29
CACNA1A-208ENST00000587451 ATMINO43313 823 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-208ENST00000587451 BMP2KQ9NSY1 1161 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-208ENST00000587451 TRPC6Q9Y210 931 aa13.23□□□□□ -0.29
CACNA1A-208ENST00000587451 TTLL13PA6NNM8 815 aa13.2□□□□□ -0.3
CACNA1A-208ENST00000587451 TMEM106CQ9BVX2 250 aa13.2□□□□□ -0.3
CACNA1A-208ENST00000587451 ECM2O94769 699 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-208ENST00000587451 ATN1P54259 1190 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-208ENST00000587451 SLC39A7Q92504 469 aa13.18□□□□□ -0.3
CACNA1A-208ENST00000587451 PDAP1Q13442 181 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-208ENST00000587451 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
CACNA1A-208ENST00000587451 RIOK3O14730 519 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-208ENST00000587451 C7P10643 843 aa13.14□□□□□ -0.31
CACNA1A-208ENST00000587451 PSEN1P49768 467 aa13.14□□□□□ -0.31
CACNA1A-208ENST00000587451 TRIM35Q9UPQ4 493 aa13.14□□□□□ -0.31
CACNA1A-208ENST00000587451 PKD2Q13563 968 aa13.13□□□□□ -0.31
CACNA1A-208ENST00000587451 GOLGA2Q08379 1002 aa13.12□□□□□ -0.31
CACNA1A-208ENST00000587451 PELP1Q8IZL8 1130 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-208ENST00000587451 METRNQ9UJH8 293 aa13.11□□□□□ -0.31
CACNA1A-208ENST00000587451 VGFO15240 615 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-208ENST00000587451 IER5LQ5T953 404 aa13.09□□□□□ -0.31
CACNA1A-208ENST00000587451 RNF25Q96BH1 459 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-208ENST00000587451 SEC24BO95487 1268 aa13.05□□□□□ -0.32
CACNA1A-208ENST00000587451 MKRN3Q13064 507 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-208ENST00000587451 RGL2O15211 777 aa12.99□□□□□ -0.33
CACNA1A-208ENST00000587451 CABP2Q9NPB3 220 aa12.99□□□□□ -0.33
CACNA1A-208ENST00000587451 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.98□□□□□ -0.33
CACNA1A-208ENST00000587451 PLCG2P16885 1265 aa12.98□□□□□ -0.33
CACNA1A-208ENST00000587451 ZFP91Q96JP5 570 aaPredicted RBP12.98□□□□□ -0.33
CACNA1A-208ENST00000587451 AMER1Q5JTC6 1135 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-208ENST00000587451 OCEL1Q9H607 264 aa12.93□□□□□ -0.34
CACNA1A-208ENST00000587451 STK25O00506 426 aa12.92□□□□□ -0.34
CACNA1A-208ENST00000587451 IRX5P78411 483 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-208ENST00000587451 OTUD5Q96G74 571 aa12.9□□□□□ -0.34
CACNA1A-208ENST00000587451 BCL11BQ9C0K0 894 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-208ENST00000587451 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.9□□□□□ -0.34
CACNA1A-208ENST00000587451 COLQQ9Y215 455 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-208ENST00000587451 STK24Q9Y6E0 443 aa12.9□□□□□ -0.34
CACNA1A-208ENST00000587451 MAMSTRQ6ZN01 415 aa12.89□□□□□ -0.35
CACNA1A-208ENST00000587451 POTEFA5A3E0 1075 aa12.87□□□□□ -0.35
CACNA1A-208ENST00000587451 POTEMA6NI47 508 aa12.87□□□□□ -0.35
CACNA1A-208ENST00000587451 EFCAB3Q8N7B9 438 aa12.86□□□□□ -0.35
CACNA1A-208ENST00000587451 POTEB2H3BUK9 544 aa12.84□□□□□ -0.35
CACNA1A-208ENST00000587451 SOX12O15370 315 aa12.84□□□□□ -0.35
CACNA1A-208ENST00000587451 SCUBE2Q9NQ36 999 aa12.84□□□□□ -0.35
CACNA1A-208ENST00000587451 DCAF8L2P0C7V8 631 aa12.82□□□□□ -0.36
CACNA1A-208ENST00000587451 POTEGQ6S5H5 508 aa12.81□□□□□ -0.36
CACNA1A-208ENST00000587451 PDCD7Q8N8D1 485 aaKnown RBP12.8□□□□□ -0.36
CACNA1A-208ENST00000587451 L3MBTL3Q96JM7 780 aaPredicted RBP12.8□□□□□ -0.36
CACNA1A-208ENST00000587451 G3V3G9 751 aa12.79□□□□□ -0.36
CACNA1A-208ENST00000587451 ILDR1Q86SU0 546 aaPredicted RBP12.78□□□□□ -0.36
CACNA1A-208ENST00000587451 HS6ST3Q8IZP7 471 aa12.78□□□□□ -0.36
CACNA1A-208ENST00000587451 PCDH10Q9P2E7 1040 aa12.78□□□□□ -0.36
CACNA1A-208ENST00000587451 CHGAP10645 457 aaKnown RBP12.77□□□□□ -0.37
CACNA1A-208ENST00000587451 NLRP6P59044 892 aa12.75□□□□□ -0.37
CACNA1A-208ENST00000587451 RTN4Q9NQC3 1192 aaKnown RBP12.75□□□□□ -0.37
CACNA1A-208ENST00000587451 POTEJP0CG39 1038 aa12.73□□□□□ -0.37
CACNA1A-208ENST00000587451 PHF8Q9UPP1 1060 aa12.72□□□□□ -0.37
CACNA1A-208ENST00000587451 C3orf67Q6ZVT6 689 aa12.71□□□□□ -0.37
CACNA1A-208ENST00000587451 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.69□□□□□ -0.38
CACNA1A-208ENST00000587451 BOLA1Q9Y3E2 137 aa12.68□□□□□ -0.38
CACNA1A-208ENST00000587451 DPY19L2Q6NUT2 758 aa12.66□□□□□ -0.38
CACNA1A-208ENST00000587451 MFRPQ9BY79 579 aa12.66□□□□□ -0.38
CACNA1A-208ENST00000587451 RYDENQ9NUL5 291 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-208ENST00000587451 FBXO22Q8NEZ5 403 aa12.63□□□□□ -0.39
CACNA1A-208ENST00000587451 DNAJC5Q9H3Z4 198 aa12.63□□□□□ -0.39
CACNA1A-208ENST00000587451 SLAIN1Q8ND83 568 aa12.62□□□□□ -0.39
CACNA1A-208ENST00000587451 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
CACNA1A-208ENST00000587451 MICALL2Q8IY33 904 aa12.57□□□□□ -0.4
CACNA1A-208ENST00000587451 TMEM121BQ9BXQ6 578 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-208ENST00000587451 NKX1-1Q15270 411 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-208ENST00000587451 SNPHO15079 494 aa12.5□□□□□ -0.41
CACNA1A-208ENST00000587451 LCE2DQ5TA82 110 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-208ENST00000587451 BBXQ8WY36 941 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-208ENST00000587451 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.45□□□□□ -0.42
CACNA1A-208ENST00000587451 PPP1R37O75864 691 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms