RNA–Protein interactions for RNA: ENST00000587328.2

PIK3C3-206, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 2

Gene PIK3C3, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-206ENST00000587328 SLC39A7Q92504 469 aa12.86□□□□□ -0.35
PIK3C3-206ENST00000587328 ATMINO43313 823 aaPredicted RBP12.84□□□□□ -0.35
PIK3C3-206ENST00000587328 C7P10643 843 aa12.84□□□□□ -0.35
PIK3C3-206ENST00000587328 EHMT2Q96KQ7 1210 aa12.81□□□□□ -0.36
PIK3C3-206ENST00000587328 MAMSTRQ6ZN01 415 aa12.79□□□□□ -0.36
PIK3C3-206ENST00000587328 POTEJP0CG39 1038 aa12.76□□□□□ -0.37
PIK3C3-206ENST00000587328 TSPYL2Q9H2G4 693 aaPredicted RBP12.76□□□□□ -0.37
PIK3C3-206ENST00000587328 PCDH10Q9P2E7 1040 aa12.75□□□□□ -0.37
PIK3C3-206ENST00000587328 SCUBE2Q9NQ36 999 aa12.71□□□□□ -0.37
PIK3C3-206ENST00000587328 CCDC61Q9Y6R9 512 aa12.71□□□□□ -0.37
PIK3C3-206ENST00000587328 ATN1P54259 1190 aaPredicted RBP12.7□□□□□ -0.38
PIK3C3-206ENST00000587328 KIF12Q96FN5 646 aa12.66□□□□□ -0.38
PIK3C3-206ENST00000587328 PROM2Q8N271 834 aa12.64□□□□□ -0.39
PIK3C3-206ENST00000587328 LCE2DQ5TA82 110 aaPredicted RBP12.63□□□□□ -0.39
PIK3C3-206ENST00000587328 FAM163AQ96GL9 167 aaPredicted RBP12.63□□□□□ -0.39
PIK3C3-206ENST00000587328 BMP2KQ9NSY1 1161 aaPredicted RBP12.63□□□□□ -0.39
PIK3C3-206ENST00000587328 PLEKHG5O94827 1062 aa12.58□□□□□ -0.4
PIK3C3-206ENST00000587328 POTEFA5A3E0 1075 aa12.57□□□□□ -0.4
PIK3C3-206ENST00000587328 TIE1P35590 1138 aa12.57□□□□□ -0.4
PIK3C3-206ENST00000587328 TRPC6Q9Y210 931 aa12.57□□□□□ -0.4
PIK3C3-206ENST00000587328 MAP3K13O43283 966 aa12.56□□□□□ -0.4
PIK3C3-206ENST00000587328 RASEFQ8IZ41 740 aa12.52□□□□□ -0.41
PIK3C3-206ENST00000587328 SEC24BO95487 1268 aa12.51□□□□□ -0.41
PIK3C3-206ENST00000587328 MIER1Q8N108 512 aa12.51□□□□□ -0.41
PIK3C3-206ENST00000587328 TTLL13PA6NNM8 815 aa12.49□□□□□ -0.41
PIK3C3-206ENST00000587328 COLQQ9Y215 455 aaPredicted RBP12.48□□□□□ -0.41
PIK3C3-206ENST00000587328 IER5LQ5T953 404 aa12.43□□□□□ -0.42
PIK3C3-206ENST00000587328 TRIM35Q9UPQ4 493 aa12.42□□□□□ -0.42
PIK3C3-206ENST00000587328 SGIP1Q9BQI5 828 aa12.4□□□□□ -0.42
PIK3C3-206ENST00000587328 PCDHB13Q9Y5F0 798 aa12.4□□□□□ -0.42
PIK3C3-206ENST00000587328 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
PIK3C3-206ENST00000587328 PLCD3Q8N3E9 789 aa12.38□□□□□ -0.43
PIK3C3-206ENST00000587328 SLAIN1Q8ND83 568 aa12.33□□□□□ -0.44
PIK3C3-206ENST00000587328 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
PIK3C3-206ENST00000587328 IFNL1Q8IU54 200 aa12.3□□□□□ -0.44
PIK3C3-206ENST00000587328 PLCG2P16885 1265 aa12.29□□□□□ -0.44
PIK3C3-206ENST00000587328 TMEM106CQ9BVX2 250 aa12.29□□□□□ -0.44
PIK3C3-206ENST00000587328 ST18O60284 1047 aa12.28□□□□□ -0.44
PIK3C3-206ENST00000587328 NUBP1P53384 320 aa12.28□□□□□ -0.44
PIK3C3-206ENST00000587328 FAM212AQ96EL1 285 aa12.27□□□□□ -0.45
PIK3C3-206ENST00000587328 IRX5P78411 483 aaPredicted RBP12.2□□□□□ -0.46
PIK3C3-206ENST00000587328 TMEM121BQ9BXQ6 578 aaPredicted RBP12.16□□□□□ -0.46
PIK3C3-206ENST00000587328 OCEL1Q9H607 264 aa12.15□□□□□ -0.46
PIK3C3-206ENST00000587328 SNPHO15079 494 aa12.12□□□□□ -0.47
PIK3C3-206ENST00000587328 MMRN1Q13201 1228 aa12.1□□□□□ -0.47
PIK3C3-206ENST00000587328 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.1□□□□□ -0.47
PIK3C3-206ENST00000587328 PYGBP11216 843 aa12.08□□□□□ -0.48
PIK3C3-206ENST00000587328 SPNS2Q8IVW8 549 aa12.08□□□□□ -0.48
PIK3C3-206ENST00000587328 DCAF8Q5TAQ9 597 aa12.06□□□□□ -0.48
PIK3C3-206ENST00000587328 MARVELD3Q96A59 401 aa12.05□□□□□ -0.48
PIK3C3-206ENST00000587328 PCDHB8Q9UN66 801 aa12.03□□□□□ -0.48
PIK3C3-206ENST00000587328 C3orf67Q6ZVT6 689 aa11.99□□□□□ -0.49
PIK3C3-206ENST00000587328 FKBP8Q14318 412 aa11.96□□□□□ -0.49
PIK3C3-206ENST00000587328 EMP3P54852 163 aa11.95□□□□□ -0.5
PIK3C3-206ENST00000587328 PDCD7Q8N8D1 485 aaKnown RBP11.95□□□□□ -0.5
PIK3C3-206ENST00000587328 GOLGA2Q08379 1002 aa11.94□□□□□ -0.5
PIK3C3-206ENST00000587328 MKRN3Q13064 507 aaKnown RBP11.93□□□□□ -0.5
PIK3C3-206ENST00000587328 ZNF467Q7Z7K2 595 aaPredicted RBP11.92□□□□□ -0.5
PIK3C3-206ENST00000587328 L3MBTL3Q96JM7 780 aaPredicted RBP11.92□□□□□ -0.5
PIK3C3-206ENST00000587328 GSE1Q14687 1217 aa11.87□□□□□ -0.51
PIK3C3-206ENST00000587328 FBXO3Q9UK99 471 aa11.87□□□□□ -0.51
PIK3C3-206ENST00000587328 HS3ST6Q96QI5 342 aa11.86□□□□□ -0.51
PIK3C3-206ENST00000587328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.86□□□□□ -0.513e-6■■■□□ 15.7
PIK3C3-206ENST00000587328 FAM205CA6NFA0 338 aa11.84□□□□□ -0.51
PIK3C3-206ENST00000587328 KRTAP3-3Q9BYR6 98 aa11.84□□□□□ -0.51
PIK3C3-206ENST00000587328 KRTAP3-2Q9BYR7 98 aa11.84□□□□□ -0.51
PIK3C3-206ENST00000587328 POTEB3A0JP26 581 aa11.81□□□□□ -0.52
PIK3C3-206ENST00000587328 PSEN1P49768 467 aa11.81□□□□□ -0.52
PIK3C3-206ENST00000587328 POTEBQ6S5H4 581 aa11.81□□□□□ -0.52
PIK3C3-206ENST00000587328 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
PIK3C3-206ENST00000587328 CHRM1P11229 460 aaPredicted RBP11.78□□□□□ -0.52
PIK3C3-206ENST00000587328 VASPP50552 380 aaPredicted RBP11.74□□□□□ -0.53
PIK3C3-206ENST00000587328 ILDR1Q86SU0 546 aaPredicted RBP11.74□□□□□ -0.53
PIK3C3-206ENST00000587328 G3V3G9 751 aa11.73□□□□□ -0.53
PIK3C3-206ENST00000587328 PDAP1Q13442 181 aaKnown RBP11.72□□□□□ -0.53
PIK3C3-206ENST00000587328 DPY19L2Q6NUT2 758 aa11.71□□□□□ -0.53
PIK3C3-206ENST00000587328 BOLA1Q9Y3E2 137 aa11.7□□□□□ -0.54
PIK3C3-206ENST00000587328 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
PIK3C3-206ENST00000587328 ZNF710Q8N1W2 664 aa11.67□□□□□ -0.54
PIK3C3-206ENST00000587328 CABP2Q9NPB3 220 aa11.67□□□□□ -0.54
PIK3C3-206ENST00000587328 HOXB1P14653 301 aaPredicted RBP11.64□□□□□ -0.55
PIK3C3-206ENST00000587328 DOK7Q18PE1 504 aa11.63□□□□□ -0.55
PIK3C3-206ENST00000587328 ERBB3P21860 1342 aa11.62□□□□□ -0.55
PIK3C3-206ENST00000587328 RIMBP2O15034 1052 aa11.58□□□□□ -0.56
PIK3C3-206ENST00000587328 RNF166Q96A37 237 aaPredicted RBP11.58□□□□□ -0.56
PIK3C3-206ENST00000587328 CIZ1Q9ULV3 898 aaPredicted RBP11.57□□□□□ -0.56
PIK3C3-206ENST00000587328 VARS2Q5ST30 1063 aaKnown RBP11.54□□□□□ -0.56
PIK3C3-206ENST00000587328 SPOCK2Q92563 424 aa11.54□□□□□ -0.56
PIK3C3-206ENST00000587328 MYT1LQ9UL68 1186 aa11.51□□□□□ -0.57
PIK3C3-206ENST00000587328 EFCAB3Q8N7B9 438 aa11.47□□□□□ -0.57
PIK3C3-206ENST00000587328 ZSWIM6Q9HCJ5 1215 aa11.47□□□□□ -0.57
PIK3C3-206ENST00000587328 IFNLR1Q8IU57 520 aaPredicted RBP11.45□□□□□ -0.58
PIK3C3-206ENST00000587328 ZNF687Q8N1G0 1237 aa11.45□□□□□ -0.58
PIK3C3-206ENST00000587328 MICALL2Q8IY33 904 aa11.44□□□□□ -0.58
PIK3C3-206ENST00000587328 PTGER2P43116 358 aa11.41□□□□□ -0.58
PIK3C3-206ENST00000587328 TMEM92Q6UXU6 159 aa11.41□□□□□ -0.58
PIK3C3-206ENST00000587328 GPR153Q6NV75 609 aa11.39□□□□□ -0.59
PIK3C3-206ENST00000587328 TRIM41Q8WV44 630 aa11.39□□□□□ -0.59
PIK3C3-206ENST00000587328 SOX12O15370 315 aa11.33□□□□□ -0.6
PIK3C3-206ENST00000587328 ANKRD13DQ6ZTN6 518 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms