RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 RNF25Q96BH1 459 aaPredicted RBP12.68□□□□□ -0.38
TPM4-203ENST00000586193 ARXQ96QS3 562 aa12.66□□□□□ -0.38
TPM4-203ENST00000586193 C1QBPQ07021 282 aaKnown RBP12.64□□□□□ -0.39
TPM4-203ENST00000586193 ERICH6Q7L0X2 663 aa12.64□□□□□ -0.39
TPM4-203ENST00000586193 GTPBP6O43824 516 aaPredicted RBP12.63□□□□□ -0.39
TPM4-203ENST00000586193 TMEM132AQ24JP5 1023 aa12.62□□□□□ -0.39
TPM4-203ENST00000586193 GSE1Q14687 1217 aa12.59□□□□□ -0.39
TPM4-203ENST00000586193 DAXXQ9UER7 740 aaPredicted RBP12.56□□□□□ -0.4
TPM4-203ENST00000586193 RIOK3O14730 519 aaKnown RBP12.55□□□□□ -0.4
TPM4-203ENST00000586193 DSG3P32926 999 aa12.53□□□□□ -0.4
TPM4-203ENST00000586193 STK25O00506 426 aa12.51□□□□□ -0.41
TPM4-203ENST00000586193 DCAF8Q5TAQ9 597 aa12.5□□□□□ -0.41
TPM4-203ENST00000586193 NUBP1P53384 320 aa12.49□□□□□ -0.41
TPM4-203ENST00000586193 C14orf37Q86TY3 774 aa12.49□□□□□ -0.41
TPM4-203ENST00000586193 VGFO15240 615 aaPredicted RBP12.44□□□□□ -0.42
TPM4-203ENST00000586193 HOMEZQ8IX15 550 aa12.41□□□□□ -0.42
TPM4-203ENST00000586193 P3H3Q8IVL6 736 aa12.39□□□□□ -0.43
TPM4-203ENST00000586193 STK24Q9Y6E0 443 aa12.39□□□□□ -0.43
TPM4-203ENST00000586193 BCL11BQ9C0K0 894 aaPredicted RBP12.37□□□□□ -0.43
TPM4-203ENST00000586193 RYDENQ9NUL5 291 aaKnown RBP12.36□□□□□ -0.43
TPM4-203ENST00000586193 LMOD2Q6P5Q4 547 aa12.35□□□□□ -0.43
TPM4-203ENST00000586193 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.34□□□□□ -0.43
TPM4-203ENST00000586193 FAM212AQ96EL1 285 aa12.34□□□□□ -0.43
TPM4-203ENST00000586193 ZFP91Q96JP5 570 aaPredicted RBP12.34□□□□□ -0.43
TPM4-203ENST00000586193 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.33□□□□□ -0.44
TPM4-203ENST00000586193 SGIP1Q9BQI5 828 aa12.33□□□□□ -0.44
TPM4-203ENST00000586193 CHRM1P11229 460 aaPredicted RBP12.3□□□□□ -0.44
TPM4-203ENST00000586193 KCNV2Q8TDN2 545 aa12.3□□□□□ -0.44
TPM4-203ENST00000586193 WDR70Q9NW82 654 aa12.28□□□□□ -0.44
TPM4-203ENST00000586193 BRPF1P55201 1214 aaPredicted RBP12.27□□□□□ -0.45
TPM4-203ENST00000586193 CADPS2Q86UW7 1296 aa12.24□□□□□ -0.45
TPM4-203ENST00000586193 RASEFQ8IZ41 740 aa12.22□□□□□ -0.45
TPM4-203ENST00000586193 PYGBP11216 843 aa12.21□□□□□ -0.45
TPM4-203ENST00000586193 MNX1P50219 401 aaPredicted RBP12.2□□□□□ -0.46
TPM4-203ENST00000586193 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
TPM4-203ENST00000586193 SUPT5HO00267 1087 aaKnown RBP12.18□□□□□ -0.46
TPM4-203ENST00000586193 NEUROD2Q15784 382 aa12.15□□□□□ -0.46
TPM4-203ENST00000586193 ZC3H15Q8WU90 426 aaKnown RBP12.15□□□□□ -0.46
TPM4-203ENST00000586193 SPDYE1Q8NFV5 336 aaPredicted RBP12.13□□□□□ -0.47
TPM4-203ENST00000586193 PRR29P0C7W0 189 aa12.1□□□□□ -0.47
TPM4-203ENST00000586193 SLC24A3Q9HC58 644 aa12.1□□□□□ -0.47
TPM4-203ENST00000586193 CLEC11AQ9Y240 323 aa12.1□□□□□ -0.47
TPM4-203ENST00000586193 ARHGEF1Q92888 912 aaKnown RBP12.06□□□□□ -0.48
TPM4-203ENST00000586193 SEMA3EO15041 775 aa12.02□□□□□ -0.49
TPM4-203ENST00000586193 TESPA1A2RU30 521 aaPredicted RBP11.99□□□□□ -0.49
TPM4-203ENST00000586193 E2F4Q16254 413 aa11.99□□□□□ -0.49
TPM4-203ENST00000586193 ZNF467Q7Z7K2 595 aaPredicted RBP11.98□□□□□ -0.49
TPM4-203ENST00000586193 MFRPQ9BY79 579 aa11.98□□□□□ -0.49
TPM4-203ENST00000586193 PDAP1Q13442 181 aaKnown RBP11.96□□□□□ -0.49
TPM4-203ENST00000586193 AKT1S1Q96B36 256 aa11.95□□□□□ -0.5
TPM4-203ENST00000586193 ZMYND10O75800 440 aa11.93□□□□□ -0.5
TPM4-203ENST00000586193 PPP1R37O75864 691 aa11.93□□□□□ -0.5
TPM4-203ENST00000586193 PCDHB8Q9UN66 801 aa11.92□□□□□ -0.5
TPM4-203ENST00000586193 PCDHB13Q9Y5F0 798 aa11.92□□□□□ -0.5
TPM4-203ENST00000586193 TSPYL2Q9H2G4 693 aaPredicted RBP11.9□□□□□ -0.5
TPM4-203ENST00000586193 PODXL2Q9NZ53 605 aa11.89□□□□□ -0.51
TPM4-203ENST00000586193 PSEN1P49768 467 aa11.87□□□□□ -0.51
TPM4-203ENST00000586193 REM2Q8IYK8 340 aaPredicted RBP11.87□□□□□ -0.51
TPM4-203ENST00000586193 SMYD5Q6GMV2 418 aa11.86□□□□□ -0.51
TPM4-203ENST00000586193 UBTFP17480 764 aaKnown RBP11.84□□□□□ -0.51
TPM4-203ENST00000586193 BARGINQ6ZT62 677 aa11.84□□□□□ -0.51
TPM4-203ENST00000586193 RBM42Q9BTD8 480 aaKnown RBP11.84□□□□□ -0.51
TPM4-203ENST00000586193 FBXO22Q8NEZ5 403 aa11.81□□□□□ -0.52
TPM4-203ENST00000586193 GPBP1L1Q9HC44 474 aaPredicted RBP11.81□□□□□ -0.52
TPM4-203ENST00000586193 NLRP6P59044 892 aa11.8□□□□□ -0.52
TPM4-203ENST00000586193 ZMYND15Q9H091 742 aa11.8□□□□□ -0.52
TPM4-203ENST00000586193 EFCAB3Q8N7B9 438 aa11.79□□□□□ -0.52
TPM4-203ENST00000586193 IL27Q8NEV9 243 aa11.79□□□□□ -0.52
TPM4-203ENST00000586193 LARP6Q9BRS8 491 aaKnown RBP11.79□□□□□ -0.52
TPM4-203ENST00000586193 NCKAP5LQ9HCH0 1330 aa11.79□□□□□ -0.52
TPM4-203ENST00000586193 ZNF579Q8NAF0 562 aaKnown RBP11.78□□□□□ -0.52
TPM4-203ENST00000586193 AK7Q96M32 723 aa11.78□□□□□ -0.52
TPM4-203ENST00000586193 PHF8Q9UPP1 1060 aa11.78□□□□□ -0.52
TPM4-203ENST00000586193 SOX12O15370 315 aa11.74□□□□□ -0.53
TPM4-203ENST00000586193 PDE4AP27815 886 aa11.74□□□□□ -0.53
TPM4-203ENST00000586193 KRI1Q8N9T8 703 aaKnown RBP11.74□□□□□ -0.53
TPM4-203ENST00000586193 CABP2Q9NPB3 220 aa11.74□□□□□ -0.53
TPM4-203ENST00000586193 PITPNM1O00562 1244 aa11.73□□□□□ -0.53
TPM4-203ENST00000586193 CHADLQ6NUI6 762 aa11.73□□□□□ -0.53
TPM4-203ENST00000586193 RSPH6AQ9H0K4 717 aa11.73□□□□□ -0.53
TPM4-203ENST00000586193 RBM26Q5T8P6 1007 aaKnown RBP11.72□□□□□ -0.53
TPM4-203ENST00000586193 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
TPM4-203ENST00000586193 MFSD10Q14728 455 aa11.71□□□□□ -0.53
TPM4-203ENST00000586193 KDM4CQ9H3R0 1056 aa11.71□□□□□ -0.53
TPM4-203ENST00000586193 CCDC61Q9Y6R9 512 aa11.71□□□□□ -0.53
TPM4-203ENST00000586193 ARIH1Q9Y4X5 557 aaPredicted RBP11.7□□□□□ -0.54
TPM4-203ENST00000586193 TRIM26Q12899 539 aaPredicted RBP11.69□□□□□ -0.54
TPM4-203ENST00000586193 GPIHBP1Q8IV16 184 aa11.69□□□□□ -0.54
TPM4-203ENST00000586193 RANGAP1P46060 587 aaPredicted RBP11.68□□□□□ -0.54
TPM4-203ENST00000586193 DDX27Q96GQ7 796 aaKnown RBP11.68□□□□□ -0.54
TPM4-203ENST00000586193 IFNL1Q8IU54 200 aa11.67□□□□□ -0.54
TPM4-203ENST00000586193 MLLT3P42568 568 aaPredicted RBP11.66□□□□□ -0.54
TPM4-203ENST00000586193 CRISPLD2Q9H0B8 497 aa11.66□□□□□ -0.54
TPM4-203ENST00000586193 FARP1Q9Y4F1 1045 aaPredicted RBP11.66□□□□□ -0.54
TPM4-203ENST00000586193 ARID3AQ99856 593 aa11.65□□□□□ -0.54
TPM4-203ENST00000586193 TRIM66O15016 1216 aa11.64□□□□□ -0.55
TPM4-203ENST00000586193 PDE4DQ08499 809 aa11.64□□□□□ -0.55
TPM4-203ENST00000586193 CAMK2BQ13554 666 aa11.64□□□□□ -0.55
TPM4-203ENST00000586193 MS4A4AQ96JQ5 239 aa11.6□□□□□ -0.55
TPM4-203ENST00000586193 HRCP23327 699 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms