RNA–Protein interactions for RNA: ENST00000585970.1

NEDD4L-213, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-213ENST00000585970 C7P10643 843 aa10.13□□□□□ -0.79
NEDD4L-213ENST00000585970 SLC39A7Q92504 469 aa10.13□□□□□ -0.79
NEDD4L-213ENST00000585970 ATMINO43313 823 aaPredicted RBP10.11□□□□□ -0.79
NEDD4L-213ENST00000585970 PAK3O75914 559 aaPredicted RBP10.11□□□□□ -0.79
NEDD4L-213ENST00000585970 CDAN1Q8IWY9 1227 aa10.1□□□□□ -0.79
NEDD4L-213ENST00000585970 SCUBE2Q9NQ36 999 aa10.08□□□□□ -0.8
NEDD4L-213ENST00000585970 MS4A3Q96HJ5 214 aa10.07□□□□□ -0.8
NEDD4L-213ENST00000585970 POTEFA5A3E0 1075 aa9.98□□□□□ -0.81
NEDD4L-213ENST00000585970 ATN1P54259 1190 aaPredicted RBP9.97□□□□□ -0.81
NEDD4L-213ENST00000585970 MNX1P50219 401 aaPredicted RBP9.94□□□□□ -0.82
NEDD4L-213ENST00000585970 STAG3Q9UJ98 1225 aa9.94□□□□□ -0.82
NEDD4L-213ENST00000585970 MMRN1Q13201 1228 aa9.93□□□□□ -0.82
NEDD4L-213ENST00000585970 NPM1P06748 294 aaKnown RBP eCLIP9.92□□□□□ -0.82
NEDD4L-213ENST00000585970 SPNS2Q8IVW8 549 aa9.88□□□□□ -0.83
NEDD4L-213ENST00000585970 ST18O60284 1047 aa9.85□□□□□ -0.83
NEDD4L-213ENST00000585970 BMP2KQ9NSY1 1161 aaPredicted RBP9.85□□□□□ -0.83
NEDD4L-213ENST00000585970 COLQQ9Y215 455 aaPredicted RBP9.83□□□□□ -0.84
NEDD4L-213ENST00000585970 TRPC6Q9Y210 931 aa9.82□□□□□ -0.84
NEDD4L-213ENST00000585970 TSPYL2Q9H2G4 693 aaPredicted RBP9.78□□□□□ -0.84
NEDD4L-213ENST00000585970 CCDC61Q9Y6R9 512 aa9.78□□□□□ -0.84
NEDD4L-213ENST00000585970 KIF12Q96FN5 646 aa9.77□□□□□ -0.85
NEDD4L-213ENST00000585970 SEC24BO95487 1268 aa9.76□□□□□ -0.85
NEDD4L-213ENST00000585970 SLAIN1Q8ND83 568 aa9.74□□□□□ -0.85
NEDD4L-213ENST00000585970 TIE1P35590 1138 aa9.71□□□□□ -0.86
NEDD4L-213ENST00000585970 FKBP8Q14318 412 aa9.71□□□□□ -0.86
NEDD4L-213ENST00000585970 TTLL13PA6NNM8 815 aa9.68□□□□□ -0.86
NEDD4L-213ENST00000585970 SPDYE4A6NLX3 237 aa9.67□□□□□ -0.86
NEDD4L-213ENST00000585970 MAP3K13O43283 966 aa9.67□□□□□ -0.86
NEDD4L-213ENST00000585970 MARVELD3Q96A59 401 aa9.63□□□□□ -0.87
NEDD4L-213ENST00000585970 IER5LQ5T953 404 aa9.62□□□□□ -0.87
NEDD4L-213ENST00000585970 TMEM121BQ9BXQ6 578 aaPredicted RBP9.62□□□□□ -0.87
NEDD4L-213ENST00000585970 TRIM35Q9UPQ4 493 aa9.62□□□□□ -0.87
NEDD4L-213ENST00000585970 KRTAP3-3Q9BYR6 98 aa9.53□□□□□ -0.88
NEDD4L-213ENST00000585970 KRTAP3-2Q9BYR7 98 aa9.53□□□□□ -0.88
NEDD4L-213ENST00000585970 RASEFQ8IZ41 740 aa9.51□□□□□ -0.89
NEDD4L-213ENST00000585970 PROM2Q8N271 834 aa9.51□□□□□ -0.89
NEDD4L-213ENST00000585970 PLCG2P16885 1265 aa9.5□□□□□ -0.89
NEDD4L-213ENST00000585970 SNPHO15079 494 aa9.49□□□□□ -0.89
NEDD4L-213ENST00000585970 POTEB3A0JP26 581 aa9.48□□□□□ -0.89
NEDD4L-213ENST00000585970 POTEBQ6S5H4 581 aa9.48□□□□□ -0.89
NEDD4L-213ENST00000585970 EMP3P54852 163 aa9.46□□□□□ -0.9
NEDD4L-213ENST00000585970 IRX5P78411 483 aaPredicted RBP9.46□□□□□ -0.9
NEDD4L-213ENST00000585970 PCDHB13Q9Y5F0 798 aa9.45□□□□□ -0.9
NEDD4L-213ENST00000585970 HS3ST6Q96QI5 342 aa9.43□□□□□ -0.9
NEDD4L-213ENST00000585970 SGIP1Q9BQI5 828 aa9.42□□□□□ -0.9
NEDD4L-213ENST00000585970 TMEM106CQ9BVX2 250 aa9.42□□□□□ -0.9
NEDD4L-213ENST00000585970 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.41□□□□□ -0.9
NEDD4L-213ENST00000585970 IFNL1Q8IU54 200 aa9.4□□□□□ -0.9
NEDD4L-213ENST00000585970 FAM205CA6NFA0 338 aa9.39□□□□□ -0.91
NEDD4L-213ENST00000585970 OCEL1Q9H607 264 aa9.36□□□□□ -0.91
NEDD4L-213ENST00000585970 FBXO3Q9UK99 471 aa9.34□□□□□ -0.91
NEDD4L-213ENST00000585970 RNF166Q96A37 237 aaPredicted RBP9.29□□□□□ -0.92
NEDD4L-213ENST00000585970 MIER1Q8N108 512 aa9.28□□□□□ -0.92
NEDD4L-213ENST00000585970 PLEKHG5O94827 1062 aa9.27□□□□□ -0.93
NEDD4L-213ENST00000585970 C3orf67Q6ZVT6 689 aa9.24□□□□□ -0.93
NEDD4L-213ENST00000585970 VASPP50552 380 aaPredicted RBP9.22□□□□□ -0.93
NEDD4L-213ENST00000585970 NUBP1P53384 320 aa9.21□□□□□ -0.94
NEDD4L-213ENST00000585970 PDCD7Q8N8D1 485 aaKnown RBP9.21□□□□□ -0.94
NEDD4L-213ENST00000585970 MYT1LQ9UL68 1186 aa9.18□□□□□ -0.94
NEDD4L-213ENST00000585970 PLCD3Q8N3E9 789 aa9.16□□□□□ -0.94
NEDD4L-213ENST00000585970 FAM212AQ96EL1 285 aa9.13□□□□□ -0.95
NEDD4L-213ENST00000585970 HOXB3P14651 431 aaPredicted RBP9.12□□□□□ -0.95
NEDD4L-213ENST00000585970 L3MBTL3Q96JM7 780 aaPredicted RBP9.12□□□□□ -0.95
NEDD4L-213ENST00000585970 IFNLR1Q8IU57 520 aaPredicted RBP9.11□□□□□ -0.95
NEDD4L-213ENST00000585970 PCDHB8Q9UN66 801 aa9.11□□□□□ -0.95
NEDD4L-213ENST00000585970 ERBB3P21860 1342 aa9.1□□□□□ -0.95
NEDD4L-213ENST00000585970 HOXB1P14653 301 aaPredicted RBP9.08□□□□□ -0.96
NEDD4L-213ENST00000585970 PYGBP11216 843 aa9.07□□□□□ -0.96
NEDD4L-213ENST00000585970 KLHL34Q8N239 644 aa9.06□□□□□ -0.96
NEDD4L-213ENST00000585970 VARS2Q5ST30 1063 aaKnown RBP9.05□□□□□ -0.96
NEDD4L-213ENST00000585970 ZBTB47Q9UFB7 747 aaPredicted RBP9.04□□□□□ -0.96
NEDD4L-213ENST00000585970 ZNF710Q8N1W2 664 aa9.03□□□□□ -0.96
NEDD4L-213ENST00000585970 MKRN3Q13064 507 aaKnown RBP9.02□□□□□ -0.97
NEDD4L-213ENST00000585970 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.02□□□□□ -0.972e-9■■■□□ 15.7
NEDD4L-213ENST00000585970 GOLGA2Q08379 1002 aa8.99□□□□□ -0.97
NEDD4L-213ENST00000585970 DPY19L2Q6NUT2 758 aa8.98□□□□□ -0.97
NEDD4L-213ENST00000585970 SPOCK2Q92563 424 aa8.98□□□□□ -0.97
NEDD4L-213ENST00000585970 PTGER2P43116 358 aa8.97□□□□□ -0.97
NEDD4L-213ENST00000585970 DOK7Q18PE1 504 aa8.96□□□□□ -0.98
NEDD4L-213ENST00000585970 ZNF687Q8N1G0 1237 aa8.96□□□□□ -0.98
NEDD4L-213ENST00000585970 DCAF8Q5TAQ9 597 aa8.95□□□□□ -0.98
NEDD4L-213ENST00000585970 ILDR1Q86SU0 546 aaPredicted RBP8.94□□□□□ -0.98
NEDD4L-213ENST00000585970 PLA2G2EQ9NZK7 142 aa8.94□□□□□ -0.98
NEDD4L-213ENST00000585970 BOLA1Q9Y3E2 137 aa8.92□□□□□ -0.98
NEDD4L-213ENST00000585970 ANKRD13DQ6ZTN6 518 aa8.91□□□□□ -0.98
NEDD4L-213ENST00000585970 RIMBP2O15034 1052 aa8.87□□□□□ -0.99
NEDD4L-213ENST00000585970 AMER1Q5JTC6 1135 aaPredicted RBP8.87□□□□□ -0.99
NEDD4L-213ENST00000585970 G3V3G9 751 aa8.86□□□□□ -0.99
NEDD4L-213ENST00000585970 ZNF467Q7Z7K2 595 aaPredicted RBP8.86□□□□□ -0.99
NEDD4L-213ENST00000585970 RTN4Q9NQC3 1192 aaKnown RBP8.86□□□□□ -0.99
NEDD4L-213ENST00000585970 CIZ1Q9ULV3 898 aaPredicted RBP8.85□□□□□ -0.99
NEDD4L-213ENST00000585970 PSEN1P49768 467 aa8.84□□□□□ -0.99
NEDD4L-213ENST00000585970 GSE1Q14687 1217 aa8.83□□□□□ -1
NEDD4L-213ENST00000585970 PKD2Q13563 968 aa8.82□□□□□ -1
NEDD4L-213ENST00000585970 GPR153Q6NV75 609 aa8.82□□□□□ -1
NEDD4L-213ENST00000585970 ZSWIM6Q9HCJ5 1215 aa8.81□□□□□ -1
NEDD4L-213ENST00000585970 LSM11P83369 360 aaKnown RBP eCLIP8.8□□□□□ -1
NEDD4L-213ENST00000585970 CABP2Q9NPB3 220 aa8.76□□□□□ -1.01
NEDD4L-213ENST00000585970 HCSTQ9UBK5 93 aa8.76□□□□□ -1.01
NEDD4L-213ENST00000585970 ECM2O94769 699 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms