RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 ZNF579Q8NAF0 562 aaKnown RBP12.56□□□□□ -0.4
CRLF3-206ENST00000585268 CCDC61Q9Y6R9 512 aa12.54□□□□□ -0.4
CRLF3-206ENST00000585268 CLCN6P51797 869 aa12.53□□□□□ -0.4
CRLF3-206ENST00000585268 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
CRLF3-206ENST00000585268 GSE1Q14687 1217 aa12.49□□□□□ -0.41
CRLF3-206ENST00000585268 PHF12Q96QT6 1004 aa12.49□□□□□ -0.41
CRLF3-206ENST00000585268 CIZ1Q9ULV3 898 aaPredicted RBP12.46□□□□□ -0.41
CRLF3-206ENST00000585268 KIF12Q96FN5 646 aa12.41□□□□□ -0.42
CRLF3-206ENST00000585268 PYGBP11216 843 aa12.4□□□□□ -0.42
CRLF3-206ENST00000585268 MAP3K13O43283 966 aa12.37□□□□□ -0.43
CRLF3-206ENST00000585268 PKD2Q13563 968 aa12.36□□□□□ -0.43
CRLF3-206ENST00000585268 GALR2O43603 387 aaPredicted RBP12.35□□□□□ -0.43
CRLF3-206ENST00000585268 MS4A3Q96HJ5 214 aa12.35□□□□□ -0.43
CRLF3-206ENST00000585268 CHRM1P11229 460 aaPredicted RBP12.34□□□□□ -0.43
CRLF3-206ENST00000585268 TRIM41Q8WV44 630 aa12.34□□□□□ -0.43
CRLF3-206ENST00000585268 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
CRLF3-206ENST00000585268 SGIP1Q9BQI5 828 aa12.31□□□□□ -0.44
CRLF3-206ENST00000585268 PCDHB13Q9Y5F0 798 aa12.31□□□□□ -0.44
CRLF3-206ENST00000585268 IFNL1Q8IU54 200 aa12.28□□□□□ -0.44
CRLF3-206ENST00000585268 DCBLD2Q96PD2 775 aa12.27□□□□□ -0.45
CRLF3-206ENST00000585268 ECM2O94769 699 aaPredicted RBP12.26□□□□□ -0.45
CRLF3-206ENST00000585268 TRPC6Q9Y210 931 aa12.25□□□□□ -0.45
CRLF3-206ENST00000585268 RNF25Q96BH1 459 aaPredicted RBP12.24□□□□□ -0.45
CRLF3-206ENST00000585268 PCDHB8Q9UN66 801 aa12.24□□□□□ -0.45
CRLF3-206ENST00000585268 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
CRLF3-206ENST00000585268 ZNF467Q7Z7K2 595 aaPredicted RBP12.23□□□□□ -0.45
CRLF3-206ENST00000585268 RTN4Q9NQC3 1192 aaKnown RBP12.21□□□□□ -0.45
CRLF3-206ENST00000585268 RGL2O15211 777 aa12.18□□□□□ -0.46
CRLF3-206ENST00000585268 RIOK3O14730 519 aaKnown RBP12.16□□□□□ -0.46
CRLF3-206ENST00000585268 TIE1P35590 1138 aa12.16□□□□□ -0.46
CRLF3-206ENST00000585268 BMP2KQ9NSY1 1161 aaPredicted RBP12.15□□□□□ -0.46
CRLF3-206ENST00000585268 ASTLQ6HA08 431 aaPredicted RBP12.14□□□□□ -0.47
CRLF3-206ENST00000585268 TTLL13PA6NNM8 815 aa12.12□□□□□ -0.47
CRLF3-206ENST00000585268 ATMINO43313 823 aaPredicted RBP12.12□□□□□ -0.47
CRLF3-206ENST00000585268 NISCHQ9Y2I1 1504 aa12.11□□□□□ -0.47
CRLF3-206ENST00000585268 PDAP1Q13442 181 aaKnown RBP12.11□□□□□ -0.47
CRLF3-206ENST00000585268 PSEN1P49768 467 aa12.1□□□□□ -0.47
CRLF3-206ENST00000585268 TMEM106CQ9BVX2 250 aa12.1□□□□□ -0.47
CRLF3-206ENST00000585268 ATN1P54259 1190 aaPredicted RBP12.09□□□□□ -0.47
CRLF3-206ENST00000585268 PELP1Q8IZL8 1130 aaKnown RBP12.09□□□□□ -0.47
CRLF3-206ENST00000585268 VGFO15240 615 aaPredicted RBP12.08□□□□□ -0.48
CRLF3-206ENST00000585268 LHX8Q68G74 356 aa12.05□□□□□ -0.48
CRLF3-206ENST00000585268 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.04□□□□□ -0.48
CRLF3-206ENST00000585268 ZFP91Q96JP5 570 aaPredicted RBP12.04□□□□□ -0.48
CRLF3-206ENST00000585268 TAOK2Q9UL54 1235 aa12.03□□□□□ -0.48
CRLF3-206ENST00000585268 TRIM35Q9UPQ4 493 aa12.03□□□□□ -0.48
CRLF3-206ENST00000585268 SLC39A7Q92504 469 aa12.01□□□□□ -0.49
CRLF3-206ENST00000585268 C7P10643 843 aa11.99□□□□□ -0.49
CRLF3-206ENST00000585268 METRNQ9UJH8 293 aa11.97□□□□□ -0.49
CRLF3-206ENST00000585268 BCL11BQ9C0K0 894 aaPredicted RBP11.96□□□□□ -0.49
CRLF3-206ENST00000585268 CABP2Q9NPB3 220 aa11.96□□□□□ -0.49
CRLF3-206ENST00000585268 STK25O00506 426 aa11.95□□□□□ -0.5
CRLF3-206ENST00000585268 IER5LQ5T953 404 aa11.93□□□□□ -0.5
CRLF3-206ENST00000585268 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
CRLF3-206ENST00000585268 DCAF8L2P0C7V8 631 aa11.92□□□□□ -0.5
CRLF3-206ENST00000585268 HS6ST3Q8IZP7 471 aa11.92□□□□□ -0.5
CRLF3-206ENST00000585268 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
CRLF3-206ENST00000585268 GOLGA2Q08379 1002 aa11.91□□□□□ -0.5
CRLF3-206ENST00000585268 CHGAP10645 457 aaKnown RBP11.9□□□□□ -0.5
CRLF3-206ENST00000585268 MKRN3Q13064 507 aaKnown RBP11.89□□□□□ -0.51
CRLF3-206ENST00000585268 EFCAB3Q8N7B9 438 aa11.89□□□□□ -0.51
CRLF3-206ENST00000585268 POTEFA5A3E0 1075 aa11.88□□□□□ -0.51
CRLF3-206ENST00000585268 IRX5P78411 483 aaPredicted RBP11.87□□□□□ -0.51
CRLF3-206ENST00000585268 COLQQ9Y215 455 aaPredicted RBP11.86□□□□□ -0.51
CRLF3-206ENST00000585268 ILDR1Q86SU0 546 aaPredicted RBP11.83□□□□□ -0.52
CRLF3-206ENST00000585268 SEC24BO95487 1268 aa11.82□□□□□ -0.52
CRLF3-206ENST00000585268 PDCD7Q8N8D1 485 aaKnown RBP11.81□□□□□ -0.52
CRLF3-206ENST00000585268 DNAJC5Q9H3Z4 198 aa11.81□□□□□ -0.52
CRLF3-206ENST00000585268 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.81□□□□□ -0.52
CRLF3-206ENST00000585268 SOX12O15370 315 aa11.8□□□□□ -0.52
CRLF3-206ENST00000585268 POTEJP0CG39 1038 aa11.8□□□□□ -0.52
CRLF3-206ENST00000585268 PLCG2P16885 1265 aa11.8□□□□□ -0.52
CRLF3-206ENST00000585268 OTUD5Q96G74 571 aa11.8□□□□□ -0.52
CRLF3-206ENST00000585268 OCEL1Q9H607 264 aa11.8□□□□□ -0.52
CRLF3-206ENST00000585268 MFRPQ9BY79 579 aa11.79□□□□□ -0.52
CRLF3-206ENST00000585268 PHF8Q9UPP1 1060 aa11.78□□□□□ -0.52
CRLF3-206ENST00000585268 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
CRLF3-206ENST00000585268 FBXO22Q8NEZ5 403 aa11.75□□□□□ -0.53
CRLF3-206ENST00000585268 MS4A4AQ96JQ5 239 aa11.75□□□□□ -0.53
CRLF3-206ENST00000585268 NLRP6P59044 892 aa11.73□□□□□ -0.53
CRLF3-206ENST00000585268 MAMSTRQ6ZN01 415 aa11.73□□□□□ -0.53
CRLF3-206ENST00000585268 DPY19L2Q6NUT2 758 aa11.72□□□□□ -0.53
CRLF3-206ENST00000585268 SCUBE2Q9NQ36 999 aa11.68□□□□□ -0.54
CRLF3-206ENST00000585268 BBXQ8WY36 941 aaPredicted RBP11.67□□□□□ -0.54
CRLF3-206ENST00000585268 L3MBTL3Q96JM7 780 aaPredicted RBP11.63□□□□□ -0.55
CRLF3-206ENST00000585268 GTPBP6O43824 516 aaPredicted RBP11.62□□□□□ -0.55
CRLF3-206ENST00000585268 RYDENQ9NUL5 291 aaKnown RBP11.61□□□□□ -0.55
CRLF3-206ENST00000585268 BOLA1Q9Y3E2 137 aa11.61□□□□□ -0.55
CRLF3-206ENST00000585268 PPP1R37O75864 691 aa11.6□□□□□ -0.55
CRLF3-206ENST00000585268 TMEM121BQ9BXQ6 578 aaPredicted RBP11.6□□□□□ -0.55
CRLF3-206ENST00000585268 MICALL2Q8IY33 904 aa11.59□□□□□ -0.55
CRLF3-206ENST00000585268 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.57□□□□□ -0.56
CRLF3-206ENST00000585268 G3V3G9 751 aa11.56□□□□□ -0.56
CRLF3-206ENST00000585268 C3orf67Q6ZVT6 689 aa11.54□□□□□ -0.56
CRLF3-206ENST00000585268 SPRYD3Q8NCJ5 442 aa11.51□□□□□ -0.57
CRLF3-206ENST00000585268 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.51□□□□□ -0.57
CRLF3-206ENST00000585268 PAXIP1Q6ZW49 1069 aaPredicted RBP11.49□□□□□ -0.57
CRLF3-206ENST00000585268 SLAIN1Q8ND83 568 aa11.49□□□□□ -0.57
CRLF3-206ENST00000585268 CFAP44Q96MT7 982 aa11.48□□□□□ -0.57
CRLF3-206ENST00000585268 TMEM92Q6UXU6 159 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms