RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 TRIM44Q96DX7 344 aaPredicted RBP17.53■□□□□ 0.4
RAB11FIP4-210ENST00000585058 NCLP19338 710 aaKnown RBP17.52■□□□□ 0.4
RAB11FIP4-210ENST00000585058 BECN1Q14457 450 aa17.52■□□□□ 0.4
RAB11FIP4-210ENST00000585058 TSPY4P0CV99 314 aa17.52■□□□□ 0.39
RAB11FIP4-210ENST00000585058 TSPY10P0CW01 314 aa17.52■□□□□ 0.39
RAB11FIP4-210ENST00000585058 DDRGK1Q96HY6 314 aa17.5■□□□□ 0.39
RAB11FIP4-210ENST00000585058 RB1CC1Q8TDY2 1594 aa17.49■□□□□ 0.39
RAB11FIP4-210ENST00000585058 C14orf37Q86TY3 774 aa17.46■□□□□ 0.39
RAB11FIP4-210ENST00000585058 SENP3-EIF4A1A0A087X0R7 540 aa17.46■□□□□ 0.39
RAB11FIP4-210ENST00000585058 GOLGA6L22H0YM25 854 aa17.46■□□□□ 0.38
RAB11FIP4-210ENST00000585058 EIF4G2P78344 907 aaKnown RBP eCLIP17.45■□□□□ 0.38
RAB11FIP4-210ENST00000585058 DCAF1Q9Y4B6 1507 aa17.43■□□□□ 0.38
RAB11FIP4-210ENST00000585058 MTUS2Q5JR59 1369 aa17.43■□□□□ 0.38
RAB11FIP4-210ENST00000585058 TPRNQ4KMQ1 711 aa17.43■□□□□ 0.38
RAB11FIP4-210ENST00000585058 PTMAP06454 111 aaKnown RBP17.41■□□□□ 0.38
RAB11FIP4-210ENST00000585058 ANP32EQ9BTT0 268 aa17.41■□□□□ 0.38
RAB11FIP4-210ENST00000585058 RRP7BPQ9NSQ0 103 aa17.4■□□□□ 0.38
RAB11FIP4-210ENST00000585058 ZRSR1Q15695 479 aaKnown RBP17.38■□□□□ 0.37
RAB11FIP4-210ENST00000585058 PPP1R15AO75807 674 aaPredicted RBP17.37■□□□□ 0.37
RAB11FIP4-210ENST00000585058 DNTTIP2Q5QJE6 756 aaKnown RBP17.36■□□□□ 0.37
RAB11FIP4-210ENST00000585058 NACADO15069 1562 aa17.35■□□□□ 0.37
RAB11FIP4-210ENST00000585058 RGL3Q3MIN7 710 aa17.34■□□□□ 0.37
RAB11FIP4-210ENST00000585058 TNNT2P45379 298 aaPredicted RBP17.33■□□□□ 0.37
RAB11FIP4-210ENST00000585058 TULP1O00294 542 aaPredicted RBP17.32■□□□□ 0.36
RAB11FIP4-210ENST00000585058 CASC1Q6TDU7 716 aa17.32■□□□□ 0.36
RAB11FIP4-210ENST00000585058 PPM1GO15355 546 aaPredicted RBP17.32■□□□□ 0.36
RAB11FIP4-210ENST00000585058 FTSJ3Q8IY81 847 aaKnown RBP17.32■□□□□ 0.36
RAB11FIP4-210ENST00000585058 CFAP53Q96M91 514 aa17.31■□□□□ 0.36
RAB11FIP4-210ENST00000585058 SUPT16HQ9Y5B9 1047 aaKnown RBP17.3■□□□□ 0.36
RAB11FIP4-210ENST00000585058 LAS1LQ9Y4W2 734 aaKnown RBP17.28■□□□□ 0.36
RAB11FIP4-210ENST00000585058 NEUROD2Q15784 382 aa17.28■□□□□ 0.36
RAB11FIP4-210ENST00000585058 CHMP7Q8WUX9 453 aaPredicted RBP17.27■□□□□ 0.36
RAB11FIP4-210ENST00000585058 KNSTRNQ9Y448 316 aa17.27■□□□□ 0.36
RAB11FIP4-210ENST00000585058 KCNH8Q96L42 1107 aa17.27■□□□□ 0.35
RAB11FIP4-210ENST00000585058 TAOK2Q9UL54 1235 aa17.26■□□□□ 0.35
RAB11FIP4-210ENST00000585058 RTN4Q9NQC3 1192 aaKnown RBP17.26■□□□□ 0.35
RAB11FIP4-210ENST00000585058 NAP1L5Q96NT1 182 aaPredicted RBP17.26■□□□□ 0.35
RAB11FIP4-210ENST00000585058 PLCB2Q00722 1185 aa17.25■□□□□ 0.35
RAB11FIP4-210ENST00000585058 HAP1P54257 671 aaPredicted RBP17.25■□□□□ 0.35
RAB11FIP4-210ENST00000585058 CLIP1P30622 1438 aa17.24■□□□□ 0.35
RAB11FIP4-210ENST00000585058 RGS3P49796 1198 aa17.24■□□□□ 0.35
RAB11FIP4-210ENST00000585058 ERICH6BQ5W0A0 696 aa17.23■□□□□ 0.35
RAB11FIP4-210ENST00000585058 CDCA8Q53HL2 280 aa17.2■□□□□ 0.34
RAB11FIP4-210ENST00000585058 FRAT1Q92837 279 aaPredicted RBP17.2■□□□□ 0.34
RAB11FIP4-210ENST00000585058 MAPK8IP3Q9UPT6 1336 aa17.2■□□□□ 0.34
RAB11FIP4-210ENST00000585058 CARD11Q9BXL7 1154 aa17.19■□□□□ 0.34
RAB11FIP4-210ENST00000585058 RSF1Q96T23 1441 aaPredicted RBP17.18■□□□□ 0.34
RAB11FIP4-210ENST00000585058 HSP90AB1P08238 724 aaKnown RBP17.16■□□□□ 0.34
RAB11FIP4-210ENST00000585058 PLEKHD1A6NEE1 506 aa17.15■□□□□ 0.34
RAB11FIP4-210ENST00000585058 PPP4R2Q9NY27 417 aa17.15■□□□□ 0.34
RAB11FIP4-210ENST00000585058 NOP58Q9Y2X3 529 aaKnown RBP17.14■□□□□ 0.33
RAB11FIP4-210ENST00000585058 FGD1P98174 961 aa17.13■□□□□ 0.33
RAB11FIP4-210ENST00000585058 OS9Q13438 667 aaPredicted RBP17.13■□□□□ 0.33
RAB11FIP4-210ENST00000585058 NUDCQ9Y266 331 aa17.13■□□□□ 0.33
RAB11FIP4-210ENST00000585058 ARID4BQ4LE39 1312 aaPredicted RBP17.12■□□□□ 0.33
RAB11FIP4-210ENST00000585058 LMOD2Q6P5Q4 547 aa17.12■□□□□ 0.33
RAB11FIP4-210ENST00000585058 NAP1L2Q9ULW6 460 aaPredicted RBP17.11■□□□□ 0.33
RAB11FIP4-210ENST00000585058 GOLGA6L6A8MZA4 724 aa17.11■□□□□ 0.33
RAB11FIP4-210ENST00000585058 CC2D1BQ5T0F9 858 aaKnown RBP17.1■□□□□ 0.33
RAB11FIP4-210ENST00000585058 KCNJ4P48050 445 aa17.09■□□□□ 0.33
RAB11FIP4-210ENST00000585058 NPHP1O15259 732 aa17.09■□□□□ 0.33
RAB11FIP4-210ENST00000585058 CFDP1Q9UEE9 299 aaPredicted RBP17.08■□□□□ 0.33
RAB11FIP4-210ENST00000585058 POGKQ9P215 609 aa17.08■□□□□ 0.32
RAB11FIP4-210ENST00000585058 U2SURPO15042 1029 aaKnown RBP17.08■□□□□ 0.32
RAB11FIP4-210ENST00000585058 B4GALNT3Q6L9W6 998 aa17.08■□□□□ 0.32
RAB11FIP4-210ENST00000585058 CHMP4BQ9H444 224 aaKnown RBP17.04■□□□□ 0.32
RAB11FIP4-210ENST00000585058 NRDCO43847 1150 aa17.04■□□□□ 0.32
RAB11FIP4-210ENST00000585058 SIN3AQ96ST3 1273 aa17.04■□□□□ 0.32
RAB11FIP4-210ENST00000585058 GOLGA6L4A6NEF3 574 aa17.04■□□□□ 0.32
RAB11FIP4-210ENST00000585058 CEP162Q5TB80 1403 aa17.03■□□□□ 0.32
RAB11FIP4-210ENST00000585058 HSCBQ8IWL3 235 aa17.02■□□□□ 0.32
RAB11FIP4-210ENST00000585058 MS4A1P11836 297 aa17.02■□□□□ 0.31
RAB11FIP4-210ENST00000585058 SPRYD3Q8NCJ5 442 aa17.02■□□□□ 0.31
RAB11FIP4-210ENST00000585058 GOLGA3Q08378 1498 aa17■□□□□ 0.31
RAB11FIP4-210ENST00000585058 GOLGA2Q08379 1002 aa17■□□□□ 0.31
RAB11FIP4-210ENST00000585058 MYO15BQ96JP2 1530 aa16.99■□□□□ 0.31
RAB11FIP4-210ENST00000585058 CHAF1AQ13111 956 aaPredicted RBP16.99■□□□□ 0.31
RAB11FIP4-210ENST00000585058 BAZ1BQ9UIG0 1483 aaKnown RBP16.99■□□□□ 0.31
RAB11FIP4-210ENST00000585058 CECR2Q9BXF3 1484 aa16.98■□□□□ 0.31
RAB11FIP4-210ENST00000585058 MSNP26038 577 aaKnown RBP16.97■□□□□ 0.31
RAB11FIP4-210ENST00000585058 DRC7Q8IY82 874 aa16.95■□□□□ 0.3
RAB11FIP4-210ENST00000585058 SOX12O15370 315 aa16.94■□□□□ 0.3
RAB11FIP4-210ENST00000585058 PNNQ9H307 717 aaKnown RBP16.94■□□□□ 0.3
RAB11FIP4-210ENST00000585058 BAZ1AQ9NRL2 1556 aaPredicted RBP16.94■□□□□ 0.3
RAB11FIP4-210ENST00000585058 CLSTN1O94985 981 aa16.94■□□□□ 0.3
RAB11FIP4-210ENST00000585058 NCBP3Q53F19 620 aaKnown RBP16.94■□□□□ 0.3
RAB11FIP4-210ENST00000585058 MCCP23508 829 aa16.93■□□□□ 0.3
RAB11FIP4-210ENST00000585058 AMER1Q5JTC6 1135 aaPredicted RBP16.92■□□□□ 0.3
RAB11FIP4-210ENST00000585058 L1TD1Q5T7N2 865 aaKnown RBP16.92■□□□□ 0.3
RAB11FIP4-210ENST00000585058 DEKP35659 375 aaKnown RBP16.91■□□□□ 0.3
RAB11FIP4-210ENST00000585058 TMF1P82094 1093 aa16.91■□□□□ 0.3
RAB11FIP4-210ENST00000585058 DCAF11Q8TEB1 546 aa16.9■□□□□ 0.3
RAB11FIP4-210ENST00000585058 APBB1O00213 710 aa16.88■□□□□ 0.29
RAB11FIP4-210ENST00000585058 ISY1Q9ULR0 285 aaKnown RBP16.88■□□□□ 0.29
RAB11FIP4-210ENST00000585058 EEA1Q15075 1411 aa16.88■□□□□ 0.29
RAB11FIP4-210ENST00000585058 SRPK2P78362 688 aaKnown RBP16.86■□□□□ 0.29
RAB11FIP4-210ENST00000585058 MORC1Q86VD1 984 aa16.86■□□□□ 0.29
RAB11FIP4-210ENST00000585058 GNL2Q13823 731 aaKnown RBP16.85■□□□□ 0.29
RAB11FIP4-210ENST00000585058 SAFB2Q14151 953 aaKnown RBP eCLIP16.85■□□□□ 0.29
RAB11FIP4-210ENST00000585058 RBM19Q9Y4C8 960 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms