RNA–Protein interactions for RNA: ENST00000584424.1

TTC39C-210, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-210ENST00000584424 ATMINO43313 823 aaPredicted RBP13.58□□□□□ -0.24
TTC39C-210ENST00000584424 ASTLQ6HA08 431 aaPredicted RBP13.58□□□□□ -0.24
TTC39C-210ENST00000584424 METRNQ9UJH8 293 aa13.58□□□□□ -0.24
TTC39C-210ENST00000584424 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
TTC39C-210ENST00000584424 SLC39A7Q92504 469 aa13.53□□□□□ -0.24
TTC39C-210ENST00000584424 C7P10643 843 aa13.51□□□□□ -0.25
TTC39C-210ENST00000584424 KIF12Q96FN5 646 aa13.51□□□□□ -0.25
TTC39C-210ENST00000584424 PLSCR2Q9NRY7 297 aa13.51□□□□□ -0.25
TTC39C-210ENST00000584424 PLCD3Q8N3E9 789 aa13.5□□□□□ -0.25
TTC39C-210ENST00000584424 ATN1P54259 1190 aaPredicted RBP13.49□□□□□ -0.25
TTC39C-210ENST00000584424 RASEFQ8IZ41 740 aa13.49□□□□□ -0.25
TTC39C-210ENST00000584424 MAP3K13O43283 966 aa13.46□□□□□ -0.25
TTC39C-210ENST00000584424 TRPC6Q9Y210 931 aa13.45□□□□□ -0.26
TTC39C-210ENST00000584424 POTEJP0CG39 1038 aa13.43□□□□□ -0.26
TTC39C-210ENST00000584424 BMP2KQ9NSY1 1161 aaPredicted RBP13.42□□□□□ -0.26
TTC39C-210ENST00000584424 POTEMA6NI47 508 aa13.38□□□□□ -0.27
TTC39C-210ENST00000584424 MAMSTRQ6ZN01 415 aa13.38□□□□□ -0.27
TTC39C-210ENST00000584424 FKBP8Q14318 412 aa13.36□□□□□ -0.27
TTC39C-210ENST00000584424 TIE1P35590 1138 aa13.35□□□□□ -0.27
TTC39C-210ENST00000584424 POTEGQ6S5H5 508 aa13.34□□□□□ -0.27
TTC39C-210ENST00000584424 SCUBE2Q9NQ36 999 aa13.33□□□□□ -0.28
TTC39C-210ENST00000584424 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
TTC39C-210ENST00000584424 PCDHB13Q9Y5F0 798 aa13.32□□□□□ -0.28
TTC39C-210ENST00000584424 POTEFA5A3E0 1075 aa13.31□□□□□ -0.28
TTC39C-210ENST00000584424 TTLL13PA6NNM8 815 aa13.3□□□□□ -0.28
TTC39C-210ENST00000584424 SEC24BO95487 1268 aa13.29□□□□□ -0.28
TTC39C-210ENST00000584424 NUBP1P53384 320 aa13.29□□□□□ -0.28
TTC39C-210ENST00000584424 FAM163AQ96GL9 167 aaPredicted RBP13.26□□□□□ -0.29
TTC39C-210ENST00000584424 FAM212AQ96EL1 285 aa13.24□□□□□ -0.29
TTC39C-210ENST00000584424 TRIM35Q9UPQ4 493 aa13.24□□□□□ -0.29
TTC39C-210ENST00000584424 COLQQ9Y215 455 aaPredicted RBP13.24□□□□□ -0.29
TTC39C-210ENST00000584424 SGIP1Q9BQI5 828 aa13.23□□□□□ -0.29
TTC39C-210ENST00000584424 IFNL1Q8IU54 200 aa13.22□□□□□ -0.29
TTC39C-210ENST00000584424 DCAF8Q5TAQ9 597 aa13.16□□□□□ -0.3
TTC39C-210ENST00000584424 TMEM106CQ9BVX2 250 aa13.16□□□□□ -0.3
TTC39C-210ENST00000584424 IER5LQ5T953 404 aa13.14□□□□□ -0.31
TTC39C-210ENST00000584424 LCE2DQ5TA82 110 aaPredicted RBP13.14□□□□□ -0.31
TTC39C-210ENST00000584424 PYGBP11216 843 aa13.11□□□□□ -0.31
TTC39C-210ENST00000584424 PCDH10Q9P2E7 1040 aa13.08□□□□□ -0.32
TTC39C-210ENST00000584424 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
TTC39C-210ENST00000584424 PLCG2P16885 1265 aa13.07□□□□□ -0.32
TTC39C-210ENST00000584424 SLAIN1Q8ND83 568 aa13.04□□□□□ -0.32
TTC39C-210ENST00000584424 KLHL34Q8N239 644 aa13.03□□□□□ -0.32
TTC39C-210ENST00000584424 PCDHB8Q9UN66 801 aa13.03□□□□□ -0.32
TTC39C-210ENST00000584424 IRX5P78411 483 aaPredicted RBP12.98□□□□□ -0.33
TTC39C-210ENST00000584424 OCEL1Q9H607 264 aa12.95□□□□□ -0.34
TTC39C-210ENST00000584424 VASPP50552 380 aaPredicted RBP12.93□□□□□ -0.34
TTC39C-210ENST00000584424 ST18O60284 1047 aa12.9□□□□□ -0.34
TTC39C-210ENST00000584424 GSE1Q14687 1217 aa12.9□□□□□ -0.34
TTC39C-210ENST00000584424 CDAN1Q8IWY9 1227 aa12.89□□□□□ -0.35
TTC39C-210ENST00000584424 GOLGA2Q08379 1002 aa12.87□□□□□ -0.35
TTC39C-210ENST00000584424 ZNF467Q7Z7K2 595 aaPredicted RBP12.85□□□□□ -0.35
TTC39C-210ENST00000584424 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.85□□□□□ -0.35
TTC39C-210ENST00000584424 MKRN3Q13064 507 aaKnown RBP12.82□□□□□ -0.36
TTC39C-210ENST00000584424 PSEN1P49768 467 aa12.78□□□□□ -0.36
TTC39C-210ENST00000584424 C3orf67Q6ZVT6 689 aa12.76□□□□□ -0.37
TTC39C-210ENST00000584424 PDCD7Q8N8D1 485 aaKnown RBP12.76□□□□□ -0.37
TTC39C-210ENST00000584424 SNPHO15079 494 aa12.75□□□□□ -0.37
TTC39C-210ENST00000584424 CHRM1P11229 460 aaPredicted RBP12.75□□□□□ -0.37
TTC39C-210ENST00000584424 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.75□□□□□ -0.37
TTC39C-210ENST00000584424 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
TTC39C-210ENST00000584424 MARVELD3Q96A59 401 aa12.73□□□□□ -0.37
TTC39C-210ENST00000584424 L3MBTL3Q96JM7 780 aaPredicted RBP12.72□□□□□ -0.37
TTC39C-210ENST00000584424 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
TTC39C-210ENST00000584424 SPOCK2Q92563 424 aa12.7□□□□□ -0.38
TTC39C-210ENST00000584424 TMEM121BQ9BXQ6 578 aaPredicted RBP12.7□□□□□ -0.38
TTC39C-210ENST00000584424 PDAP1Q13442 181 aaKnown RBP12.68□□□□□ -0.38
TTC39C-210ENST00000584424 CABP2Q9NPB3 220 aa12.66□□□□□ -0.38
TTC39C-210ENST00000584424 DPY19L2Q6NUT2 758 aa12.63□□□□□ -0.39
TTC39C-210ENST00000584424 G3V3G9 751 aa12.6□□□□□ -0.39
TTC39C-210ENST00000584424 EMP3P54852 163 aa12.6□□□□□ -0.39
TTC39C-210ENST00000584424 SPNS2Q8IVW8 549 aa12.56□□□□□ -0.4
TTC39C-210ENST00000584424 ILDR1Q86SU0 546 aaPredicted RBP12.55□□□□□ -0.4
TTC39C-210ENST00000584424 MMRN1Q13201 1228 aa12.54□□□□□ -0.4
TTC39C-210ENST00000584424 BOLA1Q9Y3E2 137 aa12.53□□□□□ -0.4
TTC39C-210ENST00000584424 FAM205CA6NFA0 338 aa12.52□□□□□ -0.41
TTC39C-210ENST00000584424 HS3ST6Q96QI5 342 aa12.49□□□□□ -0.41
TTC39C-210ENST00000584424 POTEB3A0JP26 581 aa12.47□□□□□ -0.41
TTC39C-210ENST00000584424 POTEBQ6S5H4 581 aa12.47□□□□□ -0.41
TTC39C-210ENST00000584424 EFCAB3Q8N7B9 438 aa12.47□□□□□ -0.41
TTC39C-210ENST00000584424 ZNF710Q8N1W2 664 aa12.43□□□□□ -0.42
TTC39C-210ENST00000584424 TRIM41Q8WV44 630 aa12.42□□□□□ -0.42
TTC39C-210ENST00000584424 HOXB3P14651 431 aaPredicted RBP12.41□□□□□ -0.42
TTC39C-210ENST00000584424 KRTAP3-3Q9BYR6 98 aa12.39□□□□□ -0.43
TTC39C-210ENST00000584424 KRTAP3-2Q9BYR7 98 aa12.39□□□□□ -0.43
TTC39C-210ENST00000584424 DOK7Q18PE1 504 aa12.36□□□□□ -0.43
TTC39C-210ENST00000584424 HOXB1P14653 301 aaPredicted RBP12.34□□□□□ -0.43
TTC39C-210ENST00000584424 ERBB3P21860 1342 aa12.34□□□□□ -0.43
TTC39C-210ENST00000584424 RIOK3O14730 519 aaKnown RBP12.33□□□□□ -0.44
TTC39C-210ENST00000584424 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.32□□□□□ -0.44
TTC39C-210ENST00000584424 MICALL2Q8IY33 904 aa12.32□□□□□ -0.44
TTC39C-210ENST00000584424 ZFP91Q96JP5 570 aaPredicted RBP12.32□□□□□ -0.44
TTC39C-210ENST00000584424 RIMBP2O15034 1052 aa12.31□□□□□ -0.44
TTC39C-210ENST00000584424 RNF25Q96BH1 459 aaPredicted RBP12.31□□□□□ -0.44
TTC39C-210ENST00000584424 SOX12O15370 315 aa12.28□□□□□ -0.44
TTC39C-210ENST00000584424 TMEM92Q6UXU6 159 aa12.28□□□□□ -0.44
TTC39C-210ENST00000584424 PHF8Q9UPP1 1060 aa12.28□□□□□ -0.44
TTC39C-210ENST00000584424 VGFO15240 615 aaPredicted RBP12.27□□□□□ -0.45
TTC39C-210ENST00000584424 MS4A4AQ96JQ5 239 aa12.26□□□□□ -0.45
TTC39C-210ENST00000584424 VARS2Q5ST30 1063 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms