RNA–Protein interactions for RNA: ENST00000584176.1

GRIN2C-204, Transcript of glutamate ionotropic receptor NMDA type subunit 2C, humanhuman

TSL 2

Gene GRIN2C, Length 6,516 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2C-204ENST00000584176 TMC1Q8TDI8 760 aa22.45■■□□□ 1.19
GRIN2C-204ENST00000584176 MSNP26038 577 aaKnown RBP22.45■■□□□ 1.18
GRIN2C-204ENST00000584176 WDR43Q15061 677 aaKnown RBP eCLIP22.44■■□□□ 1.18
GRIN2C-204ENST00000584176 DEKP35659 375 aaKnown RBP22.41■■□□□ 1.18
GRIN2C-204ENST00000584176 CALRP27797 417 aaKnown RBP22.38■■□□□ 1.17
GRIN2C-204ENST00000584176 NOP58Q9Y2X3 529 aaKnown RBP22.37■■□□□ 1.17
GRIN2C-204ENST00000584176 A0A0G2JS52 829 aa22.36■■□□□ 1.17
GRIN2C-204ENST00000584176 DRC7Q8IY82 874 aa22.33■■□□□ 1.16
GRIN2C-204ENST00000584176 MRS2Q9HD23 443 aa22.31■■□□□ 1.16
GRIN2C-204ENST00000584176 NRDCO43847 1150 aa22.31■■□□□ 1.16
GRIN2C-204ENST00000584176 CHGAP10645 457 aaKnown RBP22.31■■□□□ 1.16
GRIN2C-204ENST00000584176 CASC1Q6TDU7 716 aa22.31■■□□□ 1.16
GRIN2C-204ENST00000584176 ARID3CA6NKF2 412 aa22.29■■□□□ 1.16
GRIN2C-204ENST00000584176 HSP90AB1P08238 724 aaKnown RBP22.27■■□□□ 1.16
GRIN2C-204ENST00000584176 CLSTN1O94985 981 aa22.26■■□□□ 1.15
GRIN2C-204ENST00000584176 PLPPR3Q6T4P5 718 aa22.26■■□□□ 1.15
GRIN2C-204ENST00000584176 TONSLQ96HA7 1378 aa22.24■■□□□ 1.15
GRIN2C-204ENST00000584176 SENP3-EIF4A1A0A087X0R7 540 aa22.23■■□□□ 1.15
GRIN2C-204ENST00000584176 NOC3LQ8WTT2 800 aaKnown RBP22.23■■□□□ 1.15
GRIN2C-204ENST00000584176 ZNF777Q9ULD5 760 aaPredicted RBP22.22■■□□□ 1.15
GRIN2C-204ENST00000584176 L1TD1Q5T7N2 865 aaKnown RBP22.22■■□□□ 1.15
GRIN2C-204ENST00000584176 PNNQ9H307 717 aaKnown RBP22.18■■□□□ 1.14
GRIN2C-204ENST00000584176 STAG3Q9UJ98 1225 aa22.18■■□□□ 1.14
GRIN2C-204ENST00000584176 SPRYD3Q8NCJ5 442 aa22.18■■□□□ 1.14
GRIN2C-204ENST00000584176 NAP1L2Q9ULW6 460 aaPredicted RBP22.17■■□□□ 1.14
GRIN2C-204ENST00000584176 MIER1Q8N108 512 aa22.17■■□□□ 1.14
GRIN2C-204ENST00000584176 PLEKHG5O94827 1062 aa22.14■■□□□ 1.13
GRIN2C-204ENST00000584176 PRM3Q9NNZ6 103 aa22.13■■□□□ 1.13
GRIN2C-204ENST00000584176 RGS3P49796 1198 aa22.12■■□□□ 1.13
GRIN2C-204ENST00000584176 GOLGA6L4A6NEF3 574 aa22.11■■□□□ 1.13
GRIN2C-204ENST00000584176 A0A0U1RQG5 324 aaPredicted RBP22.1■■□□□ 1.13
GRIN2C-204ENST00000584176 PDE4CQ08493 712 aa22.08■■□□□ 1.13
GRIN2C-204ENST00000584176 P3H3Q8IVL6 736 aa22.08■■□□□ 1.12
GRIN2C-204ENST00000584176 VSIG10Q8N0Z9 540 aa22.07■■□□□ 1.12
GRIN2C-204ENST00000584176 SETQ01105 290 aaPredicted RBP22.06■■□□□ 1.12
GRIN2C-204ENST00000584176 GOLGA6L1Q8N7Z2 621 aa22.06■■□□□ 1.12
GRIN2C-204ENST00000584176 FGD1P98174 961 aa22.06■■□□□ 1.12
GRIN2C-204ENST00000584176 SUPT16HQ9Y5B9 1047 aaKnown RBP22.06■■□□□ 1.12
GRIN2C-204ENST00000584176 HIRIP3Q9BW71 556 aaPredicted RBP22.06■■□□□ 1.12
GRIN2C-204ENST00000584176 PATL2C9JE40 543 aaKnown RBP22.04■■□□□ 1.12
GRIN2C-204ENST00000584176 KIAA2012Q0VF49 1180 aa22.04■■□□□ 1.12
GRIN2C-204ENST00000584176 FTSJ3Q8IY81 847 aaKnown RBP22.03■■□□□ 1.12
GRIN2C-204ENST00000584176 FBLN2P98095 1184 aa22.02■■□□□ 1.11
GRIN2C-204ENST00000584176 ESF1Q9H501 851 aaKnown RBP22.01■■□□□ 1.11
GRIN2C-204ENST00000584176 HSCBQ8IWL3 235 aa22■■□□□ 1.11
GRIN2C-204ENST00000584176 GZF1Q9H116 711 aaPredicted RBP22■■□□□ 1.11
GRIN2C-204ENST00000584176 HSP90AA2PQ14568 343 aaPredicted RBP21.98■■□□□ 1.11
GRIN2C-204ENST00000584176 PTMSP20962 102 aa21.97■■□□□ 1.11
GRIN2C-204ENST00000584176 KDM2AQ9Y2K7 1162 aa21.96■■□□□ 1.11
GRIN2C-204ENST00000584176 KCNJ4P48050 445 aa21.96■■□□□ 1.11
GRIN2C-204ENST00000584176 SENP3Q9H4L4 574 aaPredicted RBP21.93■■□□□ 1.1
GRIN2C-204ENST00000584176 C14orf37Q86TY3 774 aa21.9■■□□□ 1.1
GRIN2C-204ENST00000584176 FBXO3Q9UK99 471 aa21.88■■□□□ 1.09
GRIN2C-204ENST00000584176 PPP4R2Q9NY27 417 aa21.86■■□□□ 1.09
GRIN2C-204ENST00000584176 OS9Q13438 667 aaPredicted RBP21.86■■□□□ 1.09
GRIN2C-204ENST00000584176 TAF7LQ5H9L4 462 aa21.86■■□□□ 1.09
GRIN2C-204ENST00000584176 CSRNP3Q8WYN3 585 aa21.86■■□□□ 1.09
GRIN2C-204ENST00000584176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.86■■□□□ 1.09
GRIN2C-204ENST00000584176 B4GALNT3Q6L9W6 998 aa21.84■■□□□ 1.09
GRIN2C-204ENST00000584176 FRAT1Q92837 279 aaPredicted RBP21.84■■□□□ 1.09
GRIN2C-204ENST00000584176 ZNF771Q7L3S4 317 aaPredicted RBP21.83■■□□□ 1.09
GRIN2C-204ENST00000584176 ANO8Q9HCE9 1232 aaPredicted RBP21.82■■□□□ 1.08
GRIN2C-204ENST00000584176 GNL2Q13823 731 aaKnown RBP21.81■■□□□ 1.08
GRIN2C-204ENST00000584176 APPP05067 770 aa21.8■■□□□ 1.08
GRIN2C-204ENST00000584176 NEUROD2Q15784 382 aa21.79■■□□□ 1.08
GRIN2C-204ENST00000584176 ISY1Q9ULR0 285 aaKnown RBP21.76■■□□□ 1.07
GRIN2C-204ENST00000584176 GOLGA6L3A6NEY3 463 aa21.75■■□□□ 1.07
GRIN2C-204ENST00000584176 CHIC2Q9UKJ5 165 aa21.73■■□□□ 1.07
GRIN2C-204ENST00000584176 RBM19Q9Y4C8 960 aaKnown RBP21.73■■□□□ 1.07
GRIN2C-204ENST00000584176 MCCP23508 829 aa21.72■■□□□ 1.07
GRIN2C-204ENST00000584176 GBP4Q96PP9 640 aa21.71■■□□□ 1.07
GRIN2C-204ENST00000584176 TIMELESSQ9UNS1 1208 aa21.71■■□□□ 1.07
GRIN2C-204ENST00000584176 NPHP1O15259 732 aa21.71■■□□□ 1.07
GRIN2C-204ENST00000584176 GOLGA2Q08379 1002 aa21.7■■□□□ 1.06
GRIN2C-204ENST00000584176 RSPH6AQ9H0K4 717 aa21.69■■□□□ 1.06
GRIN2C-204ENST00000584176 SLKQ9H2G2 1235 aaPredicted RBP21.69■■□□□ 1.06
GRIN2C-204ENST00000584176 TPM4P67936 248 aa21.69■■□□□ 1.06
GRIN2C-204ENST00000584176 CREBRFQ8IUR6 639 aa21.69■■□□□ 1.06
GRIN2C-204ENST00000584176 USP35Q9P2H5 1018 aa21.67■■□□□ 1.06
GRIN2C-204ENST00000584176 HSP90B1P14625 803 aaKnown RBP21.65■■□□□ 1.06
GRIN2C-204ENST00000584176 CFAP53Q96M91 514 aa21.64■■□□□ 1.05
GRIN2C-204ENST00000584176 CCAR2Q8N163 923 aaKnown RBP21.62■■□□□ 1.05
GRIN2C-204ENST00000584176 EIF4G2P78344 907 aaKnown RBP eCLIP21.62■■□□□ 1.05
GRIN2C-204ENST00000584176 RRP12Q5JTH9 1297 aaKnown RBP21.61■■□□□ 1.05
GRIN2C-204ENST00000584176 SYAP1Q96A49 352 aaPredicted RBP21.61■■□□□ 1.05
GRIN2C-204ENST00000584176 MAPK8IP3Q9UPT6 1336 aa21.58■■□□□ 1.04
GRIN2C-204ENST00000584176 TPM3P06753 285 aa21.57■■□□□ 1.04
GRIN2C-204ENST00000584176 HAP1P54257 671 aaPredicted RBP21.55■■□□□ 1.04
GRIN2C-204ENST00000584176 CEP89Q96ST8 783 aa21.54■■□□□ 1.04
GRIN2C-204ENST00000584176 FOXD4L1Q9NU39 408 aa21.54■■□□□ 1.04
GRIN2C-204ENST00000584176 APBB1O00213 710 aa21.53■■□□□ 1.04
GRIN2C-204ENST00000584176 PODXL2Q9NZ53 605 aa21.52■■□□□ 1.03
GRIN2C-204ENST00000584176 CHMP4BQ9H444 224 aaKnown RBP21.51■■□□□ 1.03
GRIN2C-204ENST00000584176 KNSTRNQ9Y448 316 aa21.5■■□□□ 1.03
GRIN2C-204ENST00000584176 HTATSF1O43719 755 aaKnown RBP21.5■■□□□ 1.03
GRIN2C-204ENST00000584176 GPS2Q13227 327 aa21.49■■□□□ 1.03
GRIN2C-204ENST00000584176 ZNF592Q92610 1267 aa21.48■■□□□ 1.03
GRIN2C-204ENST00000584176 CALD1Q05682 793 aaKnown RBP21.47■■□□□ 1.03
GRIN2C-204ENST00000584176 FAM13BQ9NYF5 915 aa21.47■■□□□ 1.03
GRIN2C-204ENST00000584176 WWC1Q8IX03 1113 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms