RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 CCDC61Q9Y6R9 512 aa10.78□□□□□ -0.68
VAPA-206ENST00000583475 GSE1Q14687 1217 aa10.76□□□□□ -0.69
VAPA-206ENST00000583475 ZNF579Q8NAF0 562 aaKnown RBP10.76□□□□□ -0.69
VAPA-206ENST00000583475 CIZ1Q9ULV3 898 aaPredicted RBP10.74□□□□□ -0.69
VAPA-206ENST00000583475 PHF12Q96QT6 1004 aa10.73□□□□□ -0.69
VAPA-206ENST00000583475 KIF12Q96FN5 646 aa10.69□□□□□ -0.7
VAPA-206ENST00000583475 GABBR2O75899 941 aa10.68□□□□□ -0.7
VAPA-206ENST00000583475 PYGBP11216 843 aa10.67□□□□□ -0.7
VAPA-206ENST00000583475 CHRM1P11229 460 aaPredicted RBP10.66□□□□□ -0.7
VAPA-206ENST00000583475 CLCN6P51797 869 aa10.66□□□□□ -0.7
VAPA-206ENST00000583475 PKD2Q13563 968 aa10.66□□□□□ -0.7
VAPA-206ENST00000583475 MAP3K13O43283 966 aa10.65□□□□□ -0.7
VAPA-206ENST00000583475 GALR2O43603 387 aaPredicted RBP10.61□□□□□ -0.71
VAPA-206ENST00000583475 TRIM41Q8WV44 630 aa10.61□□□□□ -0.71
VAPA-206ENST00000583475 MS4A3Q96HJ5 214 aa10.61□□□□□ -0.71
VAPA-206ENST00000583475 SGIP1Q9BQI5 828 aa10.61□□□□□ -0.71
VAPA-206ENST00000583475 PCDHB13Q9Y5F0 798 aa10.59□□□□□ -0.71
VAPA-206ENST00000583475 IFNL1Q8IU54 200 aa10.57□□□□□ -0.72
VAPA-206ENST00000583475 ECM2O94769 699 aaPredicted RBP10.56□□□□□ -0.72
VAPA-206ENST00000583475 PCDHB8Q9UN66 801 aa10.55□□□□□ -0.72
VAPA-206ENST00000583475 RTN4Q9NQC3 1192 aaKnown RBP10.54□□□□□ -0.72
VAPA-206ENST00000583475 AMER1Q5JTC6 1135 aaPredicted RBP10.53□□□□□ -0.72
VAPA-206ENST00000583475 TRPC6Q9Y210 931 aa10.53□□□□□ -0.72
VAPA-206ENST00000583475 RNF25Q96BH1 459 aaPredicted RBP10.52□□□□□ -0.73
VAPA-206ENST00000583475 ZNF467Q7Z7K2 595 aaPredicted RBP10.51□□□□□ -0.73
VAPA-206ENST00000583475 RGL2O15211 777 aa10.49□□□□□ -0.73
VAPA-206ENST00000583475 POTEIP0CG38 1075 aa10.48□□□□□ -0.73
VAPA-206ENST00000583475 RIOK3O14730 519 aaKnown RBP10.46□□□□□ -0.73
VAPA-206ENST00000583475 TIE1P35590 1138 aa10.45□□□□□ -0.74
VAPA-206ENST00000583475 DCBLD2Q96PD2 775 aa10.45□□□□□ -0.74
VAPA-206ENST00000583475 BMP2KQ9NSY1 1161 aaPredicted RBP10.44□□□□□ -0.74
VAPA-206ENST00000583475 ATMINO43313 823 aaPredicted RBP10.42□□□□□ -0.74
VAPA-206ENST00000583475 PSEN1P49768 467 aa10.42□□□□□ -0.74
VAPA-206ENST00000583475 PDAP1Q13442 181 aaKnown RBP10.42□□□□□ -0.74
VAPA-206ENST00000583475 ASTLQ6HA08 431 aaPredicted RBP10.42□□□□□ -0.74
VAPA-206ENST00000583475 TTLL13PA6NNM8 815 aa10.41□□□□□ -0.74
VAPA-206ENST00000583475 VGFO15240 615 aaPredicted RBP10.4□□□□□ -0.74
VAPA-206ENST00000583475 ATN1P54259 1190 aaPredicted RBP10.4□□□□□ -0.74
VAPA-206ENST00000583475 TMEM106CQ9BVX2 250 aa10.4□□□□□ -0.74
VAPA-206ENST00000583475 PELP1Q8IZL8 1130 aaKnown RBP10.39□□□□□ -0.75
VAPA-206ENST00000583475 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.37□□□□□ -0.75
VAPA-206ENST00000583475 ZFP91Q96JP5 570 aaPredicted RBP10.37□□□□□ -0.75
VAPA-206ENST00000583475 TAOK2Q9UL54 1235 aa10.35□□□□□ -0.75
VAPA-206ENST00000583475 TRIM35Q9UPQ4 493 aa10.33□□□□□ -0.76
VAPA-206ENST00000583475 BCL11BQ9C0K0 894 aaPredicted RBP10.29□□□□□ -0.76
VAPA-206ENST00000583475 CABP2Q9NPB3 220 aa10.29□□□□□ -0.76
VAPA-206ENST00000583475 STK25O00506 426 aa10.28□□□□□ -0.76
VAPA-206ENST00000583475 DCAF8L2P0C7V8 631 aa10.27□□□□□ -0.77
VAPA-206ENST00000583475 LHX8Q68G74 356 aa10.27□□□□□ -0.77
VAPA-206ENST00000583475 STK24Q9Y6E0 443 aa10.27□□□□□ -0.77
VAPA-206ENST00000583475 C7P10643 843 aa10.26□□□□□ -0.77
VAPA-206ENST00000583475 CHGAP10645 457 aaKnown RBP10.26□□□□□ -0.77
VAPA-206ENST00000583475 SLC39A7Q92504 469 aa10.26□□□□□ -0.77
VAPA-206ENST00000583475 IER5LQ5T953 404 aa10.25□□□□□ -0.77
VAPA-206ENST00000583475 HS6ST3Q8IZP7 471 aa10.25□□□□□ -0.77
VAPA-206ENST00000583475 GOLGA2Q08379 1002 aa10.24□□□□□ -0.77
VAPA-206ENST00000583475 EFCAB3Q8N7B9 438 aa10.24□□□□□ -0.77
VAPA-206ENST00000583475 POTEFA5A3E0 1075 aa10.23□□□□□ -0.77
VAPA-206ENST00000583475 METRNQ9UJH8 293 aa10.23□□□□□ -0.77
VAPA-206ENST00000583475 MKRN3Q13064 507 aaKnown RBP10.22□□□□□ -0.77
VAPA-206ENST00000583475 IRX5P78411 483 aaPredicted RBP10.21□□□□□ -0.77
VAPA-206ENST00000583475 COLQQ9Y215 455 aaPredicted RBP10.21□□□□□ -0.77
VAPA-206ENST00000583475 SOX12O15370 315 aa10.18□□□□□ -0.78
VAPA-206ENST00000583475 ILDR1Q86SU0 546 aaPredicted RBP10.18□□□□□ -0.78
VAPA-206ENST00000583475 DNAJC5Q9H3Z4 198 aa10.18□□□□□ -0.78
VAPA-206ENST00000583475 SEC24BO95487 1268 aa10.17□□□□□ -0.78
VAPA-206ENST00000583475 OCEL1Q9H607 264 aa10.17□□□□□ -0.78
VAPA-206ENST00000583475 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.17□□□□□ -0.781e-7■■□□□ 12.4
VAPA-206ENST00000583475 POTEB2H3BUK9 544 aa10.15□□□□□ -0.78
VAPA-206ENST00000583475 NKX1-1Q15270 411 aaPredicted RBP10.14□□□□□ -0.79
VAPA-206ENST00000583475 PDCD7Q8N8D1 485 aaKnown RBP10.14□□□□□ -0.79
VAPA-206ENST00000583475 MFRPQ9BY79 579 aa10.14□□□□□ -0.79
VAPA-206ENST00000583475 PHF8Q9UPP1 1060 aa10.14□□□□□ -0.79
VAPA-206ENST00000583475 PLCG2P16885 1265 aa10.13□□□□□ -0.79
VAPA-206ENST00000583475 FBXO22Q8NEZ5 403 aa10.12□□□□□ -0.79
VAPA-206ENST00000583475 DPY19L2Q6NUT2 758 aa10.11□□□□□ -0.79
VAPA-206ENST00000583475 MS4A4AQ96JQ5 239 aa10.11□□□□□ -0.79
VAPA-206ENST00000583475 POTEJP0CG39 1038 aa10.1□□□□□ -0.79
VAPA-206ENST00000583475 NLRP6P59044 892 aa10.1□□□□□ -0.79
VAPA-206ENST00000583475 BBXQ8WY36 941 aaPredicted RBP10.09□□□□□ -0.79
VAPA-206ENST00000583475 GTPBP6O43824 516 aaPredicted RBP10.04□□□□□ -0.8
VAPA-206ENST00000583475 OTUD5Q96G74 571 aa10.02□□□□□ -0.81
VAPA-206ENST00000583475 L3MBTL3Q96JM7 780 aaPredicted RBP10.02□□□□□ -0.81
VAPA-206ENST00000583475 PPP1R37O75864 691 aa10.01□□□□□ -0.81
VAPA-206ENST00000583475 BOLA1Q9Y3E2 137 aa9.99□□□□□ -0.81
VAPA-206ENST00000583475 MAMSTRQ6ZN01 415 aa9.98□□□□□ -0.81
VAPA-206ENST00000583475 TMEM121BQ9BXQ6 578 aaPredicted RBP9.98□□□□□ -0.81
VAPA-206ENST00000583475 RYDENQ9NUL5 291 aaKnown RBP9.98□□□□□ -0.81
VAPA-206ENST00000583475 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.98□□□□□ -0.81
VAPA-206ENST00000583475 MICALL2Q8IY33 904 aa9.96□□□□□ -0.82
VAPA-206ENST00000583475 SPRYD3Q8NCJ5 442 aa9.95□□□□□ -0.82
VAPA-206ENST00000583475 G3V3G9 751 aa9.93□□□□□ -0.82
VAPA-206ENST00000583475 PAXIP1Q6ZW49 1069 aaPredicted RBP9.93□□□□□ -0.82
VAPA-206ENST00000583475 SCUBE2Q9NQ36 999 aa9.92□□□□□ -0.82
VAPA-206ENST00000583475 CFAP44Q96MT7 982 aa9.91□□□□□ -0.82
VAPA-206ENST00000583475 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.9□□□□□ -0.82
VAPA-206ENST00000583475 C3orf67Q6ZVT6 689 aa9.89□□□□□ -0.83
VAPA-206ENST00000583475 TMEM92Q6UXU6 159 aa9.87□□□□□ -0.83
VAPA-206ENST00000583475 SLAIN1Q8ND83 568 aa9.86□□□□□ -0.83
VAPA-206ENST00000583475 PLCB2Q00722 1185 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms