RNA–Protein interactions for RNA: ENST00000582277.5

NDEL1-212, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-212ENST00000582277 PHF12Q96QT6 1004 aa9.75□□□□□ -0.85
NDEL1-212ENST00000582277 NUBP1P53384 320 aa9.74□□□□□ -0.85
NDEL1-212ENST00000582277 DCAF8Q5TAQ9 597 aa9.73□□□□□ -0.85
NDEL1-212ENST00000582277 SPOCK2Q92563 424 aa9.7□□□□□ -0.86
NDEL1-212ENST00000582277 GABBR2O75899 941 aa9.69□□□□□ -0.86
NDEL1-212ENST00000582277 CIZ1Q9ULV3 898 aaPredicted RBP9.68□□□□□ -0.86
NDEL1-212ENST00000582277 FAM212AQ96EL1 285 aa9.66□□□□□ -0.86
NDEL1-212ENST00000582277 LHX8Q68G74 356 aa9.64□□□□□ -0.87
NDEL1-212ENST00000582277 ZNF579Q8NAF0 562 aaKnown RBP9.64□□□□□ -0.87
NDEL1-212ENST00000582277 CCDC61Q9Y6R9 512 aa9.64□□□□□ -0.87
NDEL1-212ENST00000582277 PYGBP11216 843 aa9.63□□□□□ -0.87
NDEL1-212ENST00000582277 GALR2O43603 387 aaPredicted RBP9.62□□□□□ -0.87
NDEL1-212ENST00000582277 MAP3K13O43283 966 aa9.59□□□□□ -0.87
NDEL1-212ENST00000582277 MS4A3Q96HJ5 214 aa9.58□□□□□ -0.88
NDEL1-212ENST00000582277 KIF12Q96FN5 646 aa9.57□□□□□ -0.88
NDEL1-212ENST00000582277 GSE1Q14687 1217 aa9.56□□□□□ -0.88
NDEL1-212ENST00000582277 PCDHB13Q9Y5F0 798 aa9.54□□□□□ -0.88
NDEL1-212ENST00000582277 TRPC6Q9Y210 931 aa9.53□□□□□ -0.88
NDEL1-212ENST00000582277 POTEIP0CG38 1075 aa9.51□□□□□ -0.89
NDEL1-212ENST00000582277 DCBLD2Q96PD2 775 aa9.51□□□□□ -0.89
NDEL1-212ENST00000582277 PCDHB8Q9UN66 801 aa9.51□□□□□ -0.89
NDEL1-212ENST00000582277 IFNL1Q8IU54 200 aa9.49□□□□□ -0.89
NDEL1-212ENST00000582277 PRKCSHP14314 528 aaPredicted RBP9.46□□□□□ -0.9
NDEL1-212ENST00000582277 ARXQ96QS3 562 aa9.44□□□□□ -0.9
NDEL1-212ENST00000582277 ECM2O94769 699 aaPredicted RBP9.43□□□□□ -0.9
NDEL1-212ENST00000582277 CLCN6P51797 869 aa9.42□□□□□ -0.9
NDEL1-212ENST00000582277 PKD2Q13563 968 aa9.42□□□□□ -0.9
NDEL1-212ENST00000582277 PELP1Q8IZL8 1130 aaKnown RBP9.41□□□□□ -0.9
NDEL1-212ENST00000582277 BCANQ96GW7 911 aa9.4□□□□□ -0.9
NDEL1-212ENST00000582277 BMP2KQ9NSY1 1161 aaPredicted RBP9.4□□□□□ -0.9
NDEL1-212ENST00000582277 ATN1P54259 1190 aaPredicted RBP9.39□□□□□ -0.91
NDEL1-212ENST00000582277 TMEM106CQ9BVX2 250 aa9.39□□□□□ -0.91
NDEL1-212ENST00000582277 ATMINO43313 823 aaPredicted RBP9.38□□□□□ -0.91
NDEL1-212ENST00000582277 CHRM1P11229 460 aaPredicted RBP9.38□□□□□ -0.91
NDEL1-212ENST00000582277 RNF25Q96BH1 459 aaPredicted RBP9.37□□□□□ -0.91
NDEL1-212ENST00000582277 SGIP1Q9BQI5 828 aa9.37□□□□□ -0.91
NDEL1-212ENST00000582277 TAOK2Q9UL54 1235 aa9.37□□□□□ -0.91
NDEL1-212ENST00000582277 TTLL13PA6NNM8 815 aa9.36□□□□□ -0.91
NDEL1-212ENST00000582277 ZNF467Q7Z7K2 595 aaPredicted RBP9.36□□□□□ -0.91
NDEL1-212ENST00000582277 RGL2O15211 777 aa9.35□□□□□ -0.91
NDEL1-212ENST00000582277 PSEN1P49768 467 aa9.34□□□□□ -0.91
NDEL1-212ENST00000582277 TIE1P35590 1138 aa9.33□□□□□ -0.92
NDEL1-212ENST00000582277 ASTLQ6HA08 431 aaPredicted RBP9.33□□□□□ -0.92
NDEL1-212ENST00000582277 TRIM41Q8WV44 630 aa9.33□□□□□ -0.92
NDEL1-212ENST00000582277 PLSCR2Q9NRY7 297 aa9.33□□□□□ -0.92
NDEL1-212ENST00000582277 TRIM35Q9UPQ4 493 aa9.32□□□□□ -0.92
NDEL1-212ENST00000582277 RIOK3O14730 519 aaKnown RBP9.31□□□□□ -0.92
NDEL1-212ENST00000582277 DCAF8L2P0C7V8 631 aa9.29□□□□□ -0.92
NDEL1-212ENST00000582277 PDAP1Q13442 181 aaKnown RBP9.29□□□□□ -0.92
NDEL1-212ENST00000582277 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.27□□□□□ -0.93
NDEL1-212ENST00000582277 PLCB2Q00722 1185 aa9.27□□□□□ -0.93
NDEL1-212ENST00000582277 ZFP91Q96JP5 570 aaPredicted RBP9.27□□□□□ -0.93
NDEL1-212ENST00000582277 CABP2Q9NPB3 220 aa9.27□□□□□ -0.93
NDEL1-212ENST00000582277 METRNQ9UJH8 293 aa9.27□□□□□ -0.93
NDEL1-212ENST00000582277 GOLGA2Q08379 1002 aa9.25□□□□□ -0.93
NDEL1-212ENST00000582277 TIMELESSQ9UNS1 1208 aa9.25□□□□□ -0.93
NDEL1-212ENST00000582277 SEC24BO95487 1268 aa9.24□□□□□ -0.93
NDEL1-212ENST00000582277 SLC39A7Q92504 469 aa9.24□□□□□ -0.93
NDEL1-212ENST00000582277 VGFO15240 615 aaPredicted RBP9.23□□□□□ -0.93
NDEL1-212ENST00000582277 COLQQ9Y215 455 aaPredicted RBP9.23□□□□□ -0.93
NDEL1-212ENST00000582277 STK24Q9Y6E0 443 aa9.22□□□□□ -0.93
NDEL1-212ENST00000582277 POTEB2H3BUK9 544 aa9.21□□□□□ -0.94
NDEL1-212ENST00000582277 STK25O00506 426 aa9.21□□□□□ -0.94
NDEL1-212ENST00000582277 C7P10643 843 aa9.21□□□□□ -0.94
NDEL1-212ENST00000582277 MKRN3Q13064 507 aaKnown RBP9.21□□□□□ -0.94
NDEL1-212ENST00000582277 OTUD5Q96G74 571 aa9.21□□□□□ -0.94
NDEL1-212ENST00000582277 BCL11BQ9C0K0 894 aaPredicted RBP9.21□□□□□ -0.94
NDEL1-212ENST00000582277 POTEFA5A3E0 1075 aa9.2□□□□□ -0.94
NDEL1-212ENST00000582277 EFCAB3Q8N7B9 438 aa9.19□□□□□ -0.94
NDEL1-212ENST00000582277 TPRNQ4KMQ1 711 aa9.18□□□□□ -0.94
NDEL1-212ENST00000582277 CHGAP10645 457 aaKnown RBP9.17□□□□□ -0.94
NDEL1-212ENST00000582277 PLCG2P16885 1265 aa9.16□□□□□ -0.94
NDEL1-212ENST00000582277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.16□□□□□ -0.946e-8■□□□□ 11.2
NDEL1-212ENST00000582277 TULP1O00294 542 aaPredicted RBP9.15□□□□□ -0.94
NDEL1-212ENST00000582277 HOMEZQ8IX15 550 aa9.15□□□□□ -0.94
NDEL1-212ENST00000582277 HAP1P54257 671 aaPredicted RBP9.14□□□□□ -0.95
NDEL1-212ENST00000582277 DPY19L2Q6NUT2 758 aa9.14□□□□□ -0.95
NDEL1-212ENST00000582277 POTEJP0CG39 1038 aa9.13□□□□□ -0.95
NDEL1-212ENST00000582277 IRX5P78411 483 aaPredicted RBP9.13□□□□□ -0.95
NDEL1-212ENST00000582277 IER5LQ5T953 404 aa9.12□□□□□ -0.95
NDEL1-212ENST00000582277 OCEL1Q9H607 264 aa9.11□□□□□ -0.95
NDEL1-212ENST00000582277 PHF8Q9UPP1 1060 aa9.11□□□□□ -0.95
NDEL1-212ENST00000582277 ERICH6Q7L0X2 663 aa9.1□□□□□ -0.95
NDEL1-212ENST00000582277 POTEMA6NI47 508 aa9.09□□□□□ -0.95
NDEL1-212ENST00000582277 POTEGQ6S5H5 508 aa9.07□□□□□ -0.96
NDEL1-212ENST00000582277 PDCD7Q8N8D1 485 aaKnown RBP9.07□□□□□ -0.96
NDEL1-212ENST00000582277 RANGAP1P46060 587 aaPredicted RBP9.06□□□□□ -0.96
NDEL1-212ENST00000582277 VSIG10Q8N0Z9 540 aa9.05□□□□□ -0.96
NDEL1-212ENST00000582277 HS6ST3Q8IZP7 471 aa9.04□□□□□ -0.96
NDEL1-212ENST00000582277 MS4A4AQ96JQ5 239 aa9.03□□□□□ -0.96
NDEL1-212ENST00000582277 MFRPQ9BY79 579 aa9.03□□□□□ -0.96
NDEL1-212ENST00000582277 SOX12O15370 315 aa9.02□□□□□ -0.97
NDEL1-212ENST00000582277 NLRP6P59044 892 aa9□□□□□ -0.97
NDEL1-212ENST00000582277 NKX1-1Q15270 411 aaPredicted RBP9□□□□□ -0.97
NDEL1-212ENST00000582277 GTF3C3Q9Y5Q9 886 aa9□□□□□ -0.97
NDEL1-212ENST00000582277 G3V3G9 751 aa8.99□□□□□ -0.97
NDEL1-212ENST00000582277 SCUBE2Q9NQ36 999 aa8.99□□□□□ -0.97
NDEL1-212ENST00000582277 FBXO22Q8NEZ5 403 aa8.98□□□□□ -0.97
NDEL1-212ENST00000582277 PPP1R37O75864 691 aa8.97□□□□□ -0.97
NDEL1-212ENST00000582277 ILDR1Q86SU0 546 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms