RNA–Protein interactions for RNA: ENST00000581852.5

CCDC178-211, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC178, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-211ENST00000581852 PHF12Q96QT6 1004 aa9.73□□□□□ -0.85
CCDC178-211ENST00000581852 FAM212AQ96EL1 285 aa9.72□□□□□ -0.85
CCDC178-211ENST00000581852 DCAF8Q5TAQ9 597 aa9.69□□□□□ -0.86
CCDC178-211ENST00000581852 IFNLR1Q8IU57 520 aaPredicted RBP9.68□□□□□ -0.86
CCDC178-211ENST00000581852 CCDC61Q9Y6R9 512 aa9.68□□□□□ -0.86
CCDC178-211ENST00000581852 SPOCK2Q92563 424 aa9.66□□□□□ -0.86
CCDC178-211ENST00000581852 DCBLD2Q96PD2 775 aa9.66□□□□□ -0.86
CCDC178-211ENST00000581852 GALR2O43603 387 aaPredicted RBP9.64□□□□□ -0.87
CCDC178-211ENST00000581852 GSE1Q14687 1217 aa9.63□□□□□ -0.87
CCDC178-211ENST00000581852 KIF12Q96FN5 646 aa9.62□□□□□ -0.87
CCDC178-211ENST00000581852 MS4A3Q96HJ5 214 aa9.6□□□□□ -0.87
CCDC178-211ENST00000581852 MAP3K13O43283 966 aa9.59□□□□□ -0.87
CCDC178-211ENST00000581852 CIZ1Q9ULV3 898 aaPredicted RBP9.58□□□□□ -0.88
CCDC178-211ENST00000581852 POTEIP0CG38 1075 aa9.56□□□□□ -0.88
CCDC178-211ENST00000581852 PCDHB13Q9Y5F0 798 aa9.56□□□□□ -0.88
CCDC178-211ENST00000581852 PYGBP11216 843 aa9.55□□□□□ -0.88
CCDC178-211ENST00000581852 SGIP1Q9BQI5 828 aa9.55□□□□□ -0.88
CCDC178-211ENST00000581852 PLSCR2Q9NRY7 297 aa9.53□□□□□ -0.88
CCDC178-211ENST00000581852 IFNL1Q8IU54 200 aa9.48□□□□□ -0.89
CCDC178-211ENST00000581852 CHRM1P11229 460 aaPredicted RBP9.47□□□□□ -0.89
CCDC178-211ENST00000581852 ATMINO43313 823 aaPredicted RBP9.46□□□□□ -0.9
CCDC178-211ENST00000581852 TIE1P35590 1138 aa9.46□□□□□ -0.9
CCDC178-211ENST00000581852 ASTLQ6HA08 431 aaPredicted RBP9.46□□□□□ -0.9
CCDC178-211ENST00000581852 TRIM41Q8WV44 630 aa9.45□□□□□ -0.9
CCDC178-211ENST00000581852 TRPC6Q9Y210 931 aa9.45□□□□□ -0.9
CCDC178-211ENST00000581852 ZNF467Q7Z7K2 595 aaPredicted RBP9.44□□□□□ -0.9
CCDC178-211ENST00000581852 BMP2KQ9NSY1 1161 aaPredicted RBP9.44□□□□□ -0.9
CCDC178-211ENST00000581852 PCDHB8Q9UN66 801 aa9.43□□□□□ -0.9
CCDC178-211ENST00000581852 ATN1P54259 1190 aaPredicted RBP9.42□□□□□ -0.9
CCDC178-211ENST00000581852 PELP1Q8IZL8 1130 aaKnown RBP9.41□□□□□ -0.9
CCDC178-211ENST00000581852 SLC39A7Q92504 469 aa9.41□□□□□ -0.9
CCDC178-211ENST00000581852 TMEM106CQ9BVX2 250 aa9.41□□□□□ -0.9
CCDC178-211ENST00000581852 TTLL13PA6NNM8 815 aa9.4□□□□□ -0.9
CCDC178-211ENST00000581852 C7P10643 843 aa9.39□□□□□ -0.91
CCDC178-211ENST00000581852 METRNQ9UJH8 293 aa9.37□□□□□ -0.91
CCDC178-211ENST00000581852 TRIM35Q9UPQ4 493 aa9.37□□□□□ -0.91
CCDC178-211ENST00000581852 PSEN1P49768 467 aa9.34□□□□□ -0.91
CCDC178-211ENST00000581852 PDAP1Q13442 181 aaKnown RBP9.33□□□□□ -0.92
CCDC178-211ENST00000581852 SEC24BO95487 1268 aa9.32□□□□□ -0.92
CCDC178-211ENST00000581852 GOLGA2Q08379 1002 aa9.32□□□□□ -0.92
CCDC178-211ENST00000581852 ECM2O94769 699 aaPredicted RBP9.31□□□□□ -0.92
CCDC178-211ENST00000581852 IER5LQ5T953 404 aa9.31□□□□□ -0.92
CCDC178-211ENST00000581852 RIOK3O14730 519 aaKnown RBP9.29□□□□□ -0.92
CCDC178-211ENST00000581852 OTUD5Q96G74 571 aa9.28□□□□□ -0.92
CCDC178-211ENST00000581852 MKRN3Q13064 507 aaKnown RBP9.27□□□□□ -0.93
CCDC178-211ENST00000581852 TAOK2Q9UL54 1235 aa9.27□□□□□ -0.93
CCDC178-211ENST00000581852 PLCG2P16885 1265 aa9.26□□□□□ -0.93
CCDC178-211ENST00000581852 PKD2Q13563 968 aa9.25□□□□□ -0.93
CCDC178-211ENST00000581852 POTEB2H3BUK9 544 aa9.24□□□□□ -0.93
CCDC178-211ENST00000581852 VGFO15240 615 aaPredicted RBP9.24□□□□□ -0.93
CCDC178-211ENST00000581852 RNF25Q96BH1 459 aaPredicted RBP9.23□□□□□ -0.93
CCDC178-211ENST00000581852 CABP2Q9NPB3 220 aa9.23□□□□□ -0.93
CCDC178-211ENST00000581852 COLQQ9Y215 455 aaPredicted RBP9.23□□□□□ -0.93
CCDC178-211ENST00000581852 POTEMA6NI47 508 aa9.22□□□□□ -0.93
CCDC178-211ENST00000581852 POTEFA5A3E0 1075 aa9.21□□□□□ -0.94
CCDC178-211ENST00000581852 MAMSTRQ6ZN01 415 aa9.21□□□□□ -0.94
CCDC178-211ENST00000581852 OCEL1Q9H607 264 aa9.21□□□□□ -0.94
CCDC178-211ENST00000581852 IRX5P78411 483 aaPredicted RBP9.2□□□□□ -0.94
CCDC178-211ENST00000581852 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.19□□□□□ -0.94
CCDC178-211ENST00000581852 ZFP91Q96JP5 570 aaPredicted RBP9.19□□□□□ -0.94
CCDC178-211ENST00000581852 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.19□□□□□ -0.94
CCDC178-211ENST00000581852 POTEGQ6S5H5 508 aa9.18□□□□□ -0.94
CCDC178-211ENST00000581852 SCUBE2Q9NQ36 999 aa9.18□□□□□ -0.94
CCDC178-211ENST00000581852 RGL2O15211 777 aa9.17□□□□□ -0.94
CCDC178-211ENST00000581852 POTEJP0CG39 1038 aa9.14□□□□□ -0.95
CCDC178-211ENST00000581852 STK24Q9Y6E0 443 aa9.14□□□□□ -0.95
CCDC178-211ENST00000581852 STK25O00506 426 aa9.13□□□□□ -0.95
CCDC178-211ENST00000581852 EFCAB3Q8N7B9 438 aa9.13□□□□□ -0.95
CCDC178-211ENST00000581852 BCL11BQ9C0K0 894 aaPredicted RBP9.13□□□□□ -0.95
CCDC178-211ENST00000581852 L3MBTL3Q96JM7 780 aaPredicted RBP9.11□□□□□ -0.95
CCDC178-211ENST00000581852 SOX12O15370 315 aa9.1□□□□□ -0.95
CCDC178-211ENST00000581852 G3V3G9 751 aa9.09□□□□□ -0.95
CCDC178-211ENST00000581852 PDCD7Q8N8D1 485 aaKnown RBP9.09□□□□□ -0.95
CCDC178-211ENST00000581852 ILDR1Q86SU0 546 aaPredicted RBP9.06□□□□□ -0.96
CCDC178-211ENST00000581852 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.06□□□□□ -0.96
CCDC178-211ENST00000581852 DPY19L2Q6NUT2 758 aa9.04□□□□□ -0.96
CCDC178-211ENST00000581852 C3orf67Q6ZVT6 689 aa9.04□□□□□ -0.96
CCDC178-211ENST00000581852 NLRP6P59044 892 aa9.03□□□□□ -0.96
CCDC178-211ENST00000581852 SLAIN1Q8ND83 568 aa9.03□□□□□ -0.96
CCDC178-211ENST00000581852 PCDH10Q9P2E7 1040 aa9.03□□□□□ -0.96
CCDC178-211ENST00000581852 PHF8Q9UPP1 1060 aa9.03□□□□□ -0.96
CCDC178-211ENST00000581852 DCAF8L2P0C7V8 631 aa9.02□□□□□ -0.97
CCDC178-211ENST00000581852 CHGAP10645 457 aaKnown RBP9.02□□□□□ -0.97
CCDC178-211ENST00000581852 BOLA1Q9Y3E2 137 aa9.02□□□□□ -0.97
CCDC178-211ENST00000581852 LCE2DQ5TA82 110 aaPredicted RBP9.01□□□□□ -0.97
CCDC178-211ENST00000581852 NISCHQ9Y2I1 1504 aa9□□□□□ -0.97
CCDC178-211ENST00000581852 AMER1Q5JTC6 1135 aaPredicted RBP8.99□□□□□ -0.97
CCDC178-211ENST00000581852 HS6ST3Q8IZP7 471 aa8.99□□□□□ -0.97
CCDC178-211ENST00000581852 MS4A4AQ96JQ5 239 aa8.96□□□□□ -0.98
CCDC178-211ENST00000581852 MFRPQ9BY79 579 aa8.96□□□□□ -0.98
CCDC178-211ENST00000581852 FBXO22Q8NEZ5 403 aa8.95□□□□□ -0.98
CCDC178-211ENST00000581852 FAM163AQ96GL9 167 aaPredicted RBP8.94□□□□□ -0.98
CCDC178-211ENST00000581852 MICALL2Q8IY33 904 aa8.92□□□□□ -0.98
CCDC178-211ENST00000581852 TMEM121BQ9BXQ6 578 aaPredicted RBP8.92□□□□□ -0.98
CCDC178-211ENST00000581852 SNPHO15079 494 aa8.91□□□□□ -0.98
CCDC178-211ENST00000581852 RTN4Q9NQC3 1192 aaKnown RBP8.89□□□□□ -0.99
CCDC178-211ENST00000581852 RYDENQ9NUL5 291 aaKnown RBP8.88□□□□□ -0.99
CCDC178-211ENST00000581852 DNAJC5Q9H3Z4 198 aa8.86□□□□□ -0.99
CCDC178-211ENST00000581852 PPP1R37O75864 691 aa8.83□□□□□ -1
CCDC178-211ENST00000581852 NKX1-1Q15270 411 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms