RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 METRNQ9UJH8 293 aa12.91□□□□□ -0.34
SMG8-205ENST00000580798 CCDC61Q9Y6R9 512 aa12.9□□□□□ -0.34
SMG8-205ENST00000580798 PLSCR2Q9NRY7 297 aa12.89□□□□□ -0.35
SMG8-205ENST00000580798 SLC39A7Q92504 469 aa12.87□□□□□ -0.35
SMG8-205ENST00000580798 C7P10643 843 aa12.86□□□□□ -0.35
SMG8-205ENST00000580798 POTEJP0CG39 1038 aa12.85□□□□□ -0.35
SMG8-205ENST00000580798 KIF12Q96FN5 646 aa12.83□□□□□ -0.36
SMG8-205ENST00000580798 ATN1P54259 1190 aaPredicted RBP12.82□□□□□ -0.36
SMG8-205ENST00000580798 POTEMA6NI47 508 aa12.79□□□□□ -0.36
SMG8-205ENST00000580798 MIER1Q8N108 512 aa12.79□□□□□ -0.36
SMG8-205ENST00000580798 PLEKHG5O94827 1062 aa12.77□□□□□ -0.37
SMG8-205ENST00000580798 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
SMG8-205ENST00000580798 TRPC6Q9Y210 931 aa12.77□□□□□ -0.37
SMG8-205ENST00000580798 BMP2KQ9NSY1 1161 aaPredicted RBP12.76□□□□□ -0.37
SMG8-205ENST00000580798 MAP3K13O43283 966 aa12.75□□□□□ -0.37
SMG8-205ENST00000580798 POTEGQ6S5H5 508 aa12.75□□□□□ -0.37
SMG8-205ENST00000580798 MAMSTRQ6ZN01 415 aa12.72□□□□□ -0.37
SMG8-205ENST00000580798 POTEFA5A3E0 1075 aa12.71□□□□□ -0.37
SMG8-205ENST00000580798 TIE1P35590 1138 aa12.69□□□□□ -0.38
SMG8-205ENST00000580798 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
SMG8-205ENST00000580798 SCUBE2Q9NQ36 999 aa12.66□□□□□ -0.38
SMG8-205ENST00000580798 TTLL13PA6NNM8 815 aa12.63□□□□□ -0.39
SMG8-205ENST00000580798 LCE2DQ5TA82 110 aaPredicted RBP12.63□□□□□ -0.39
SMG8-205ENST00000580798 COLQQ9Y215 455 aaPredicted RBP12.6□□□□□ -0.39
SMG8-205ENST00000580798 NUBP1P53384 320 aa12.59□□□□□ -0.39
SMG8-205ENST00000580798 FAM163AQ96GL9 167 aaPredicted RBP12.58□□□□□ -0.4
SMG8-205ENST00000580798 SGIP1Q9BQI5 828 aa12.58□□□□□ -0.4
SMG8-205ENST00000580798 PCDHB13Q9Y5F0 798 aa12.58□□□□□ -0.4
SMG8-205ENST00000580798 PCDH10Q9P2E7 1040 aa12.56□□□□□ -0.4
SMG8-205ENST00000580798 SEC24BO95487 1268 aa12.55□□□□□ -0.4
SMG8-205ENST00000580798 ZBTB47Q9UFB7 747 aaPredicted RBP12.55□□□□□ -0.4
SMG8-205ENST00000580798 TRIM35Q9UPQ4 493 aa12.55□□□□□ -0.4
SMG8-205ENST00000580798 IFNL1Q8IU54 200 aa12.52□□□□□ -0.41
SMG8-205ENST00000580798 IER5LQ5T953 404 aa12.51□□□□□ -0.41
SMG8-205ENST00000580798 FAM212AQ96EL1 285 aa12.48□□□□□ -0.41
SMG8-205ENST00000580798 FKBP8Q14318 412 aa12.47□□□□□ -0.41
SMG8-205ENST00000580798 TMEM106CQ9BVX2 250 aa12.44□□□□□ -0.42
SMG8-205ENST00000580798 PLCG2P16885 1265 aa12.36□□□□□ -0.43
SMG8-205ENST00000580798 IRX5P78411 483 aaPredicted RBP12.36□□□□□ -0.43
SMG8-205ENST00000580798 SLAIN1Q8ND83 568 aa12.36□□□□□ -0.43
SMG8-205ENST00000580798 PYGBP11216 843 aa12.34□□□□□ -0.43
SMG8-205ENST00000580798 DCAF8Q5TAQ9 597 aa12.34□□□□□ -0.43
SMG8-205ENST00000580798 ST18O60284 1047 aa12.29□□□□□ -0.44
SMG8-205ENST00000580798 CDAN1Q8IWY9 1227 aa12.29□□□□□ -0.44
SMG8-205ENST00000580798 PCDHB8Q9UN66 801 aa12.29□□□□□ -0.44
SMG8-205ENST00000580798 OCEL1Q9H607 264 aa12.28□□□□□ -0.44
SMG8-205ENST00000580798 FBXO3Q9UK99 471 aa12.25□□□□□ -0.45
SMG8-205ENST00000580798 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.17□□□□□ -0.46
SMG8-205ENST00000580798 VASPP50552 380 aaPredicted RBP12.16□□□□□ -0.46
SMG8-205ENST00000580798 KLHL34Q8N239 644 aa12.16□□□□□ -0.46
SMG8-205ENST00000580798 GSE1Q14687 1217 aa12.15□□□□□ -0.46
SMG8-205ENST00000580798 PDCD7Q8N8D1 485 aaKnown RBP12.14□□□□□ -0.47
SMG8-205ENST00000580798 ZNF467Q7Z7K2 595 aaPredicted RBP12.13□□□□□ -0.47
SMG8-205ENST00000580798 TMEM121BQ9BXQ6 578 aaPredicted RBP12.12□□□□□ -0.47
SMG8-205ENST00000580798 SNPHO15079 494 aa12.11□□□□□ -0.47
SMG8-205ENST00000580798 CHRM1P11229 460 aaPredicted RBP12.09□□□□□ -0.47
SMG8-205ENST00000580798 GOLGA2Q08379 1002 aa12.08□□□□□ -0.48
SMG8-205ENST00000580798 MKRN3Q13064 507 aaKnown RBP12.08□□□□□ -0.48
SMG8-205ENST00000580798 MARVELD3Q96A59 401 aa12.07□□□□□ -0.48
SMG8-205ENST00000580798 PSEN1P49768 467 aa12.05□□□□□ -0.48
SMG8-205ENST00000580798 C3orf67Q6ZVT6 689 aa12.05□□□□□ -0.48
SMG8-205ENST00000580798 L3MBTL3Q96JM7 780 aaPredicted RBP12.04□□□□□ -0.48
SMG8-205ENST00000580798 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMG8-205ENST00000580798 SPNS2Q8IVW8 549 aa12.01□□□□□ -0.49
SMG8-205ENST00000580798 MMRN1Q13201 1228 aa11.99□□□□□ -0.49
SMG8-205ENST00000580798 ILDR1Q86SU0 546 aaPredicted RBP11.98□□□□□ -0.49
SMG8-205ENST00000580798 PDAP1Q13442 181 aaKnown RBP11.96□□□□□ -0.49
SMG8-205ENST00000580798 EMP3P54852 163 aa11.94□□□□□ -0.5
SMG8-205ENST00000580798 DPY19L2Q6NUT2 758 aa11.94□□□□□ -0.5
SMG8-205ENST00000580798 IFNLR1Q8IU57 520 aaPredicted RBP11.94□□□□□ -0.5
SMG8-205ENST00000580798 CABP2Q9NPB3 220 aa11.92□□□□□ -0.5
SMG8-205ENST00000580798 SPOCK2Q92563 424 aa11.91□□□□□ -0.5
SMG8-205ENST00000580798 CIZ1Q9ULV3 898 aaPredicted RBP11.91□□□□□ -0.5
SMG8-205ENST00000580798 POTEB3A0JP26 581 aa11.9□□□□□ -0.5
SMG8-205ENST00000580798 POTEBQ6S5H4 581 aa11.9□□□□□ -0.5
SMG8-205ENST00000580798 HS3ST6Q96QI5 342 aa11.88□□□□□ -0.51
SMG8-205ENST00000580798 FAM205CA6NFA0 338 aa11.87□□□□□ -0.51
SMG8-205ENST00000580798 BOLA1Q9Y3E2 137 aa11.86□□□□□ -0.51
SMG8-205ENST00000580798 KRTAP3-3Q9BYR6 98 aa11.85□□□□□ -0.51
SMG8-205ENST00000580798 KRTAP3-2Q9BYR7 98 aa11.85□□□□□ -0.51
SMG8-205ENST00000580798 G3V3G9 751 aa11.82□□□□□ -0.52
SMG8-205ENST00000580798 HOXB3P14651 431 aaPredicted RBP11.81□□□□□ -0.52
SMG8-205ENST00000580798 EFCAB3Q8N7B9 438 aa11.75□□□□□ -0.53
SMG8-205ENST00000580798 HOXB1P14653 301 aaPredicted RBP11.74□□□□□ -0.53
SMG8-205ENST00000580798 ZNF710Q8N1W2 664 aa11.72□□□□□ -0.53
SMG8-205ENST00000580798 DOK7Q18PE1 504 aa11.7□□□□□ -0.54
SMG8-205ENST00000580798 TRIM41Q8WV44 630 aa11.7□□□□□ -0.54
SMG8-205ENST00000580798 ERBB3P21860 1342 aa11.66□□□□□ -0.54
SMG8-205ENST00000580798 TMEM92Q6UXU6 159 aa11.66□□□□□ -0.54
SMG8-205ENST00000580798 MICALL2Q8IY33 904 aa11.65□□□□□ -0.54
SMG8-205ENST00000580798 RIMBP2O15034 1052 aa11.62□□□□□ -0.55
SMG8-205ENST00000580798 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
SMG8-205ENST00000580798 MS4A4AQ96JQ5 239 aa11.61□□□□□ -0.55
SMG8-205ENST00000580798 VARS2Q5ST30 1063 aaKnown RBP11.6□□□□□ -0.55
SMG8-205ENST00000580798 RIOK3O14730 519 aaKnown RBP11.59□□□□□ -0.55
SMG8-205ENST00000580798 SOX12O15370 315 aa11.59□□□□□ -0.55
SMG8-205ENST00000580798 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.58□□□□□ -0.56
SMG8-205ENST00000580798 ZFP91Q96JP5 570 aaPredicted RBP11.58□□□□□ -0.56
SMG8-205ENST00000580798 ZSWIM6Q9HCJ5 1215 aa11.57□□□□□ -0.56
SMG8-205ENST00000580798 PHF8Q9UPP1 1060 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms