RNA–Protein interactions for RNA: ENST00000579944.1

LINC00271-206, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-206ENST00000579944 SLC39A7Q92504 469 aa13.36□□□□□ -0.27
LINC00271-206ENST00000579944 TSPYL2Q9H2G4 693 aaPredicted RBP13.35□□□□□ -0.27
LINC00271-206ENST00000579944 POTEMA6NI47 508 aa13.34□□□□□ -0.27
LINC00271-206ENST00000579944 C7P10643 843 aa13.33□□□□□ -0.28
LINC00271-206ENST00000579944 PROM2Q8N271 834 aa13.32□□□□□ -0.28
LINC00271-206ENST00000579944 POTEGQ6S5H5 508 aa13.29□□□□□ -0.28
LINC00271-206ENST00000579944 CCDC61Q9Y6R9 512 aa13.29□□□□□ -0.28
LINC00271-206ENST00000579944 POTEJP0CG39 1038 aa13.25□□□□□ -0.29
LINC00271-206ENST00000579944 MAMSTRQ6ZN01 415 aa13.25□□□□□ -0.29
LINC00271-206ENST00000579944 ATN1P54259 1190 aaPredicted RBP13.24□□□□□ -0.29
LINC00271-206ENST00000579944 KIF12Q96FN5 646 aa13.22□□□□□ -0.29
LINC00271-206ENST00000579944 PLEKHG5O94827 1062 aa13.2□□□□□ -0.3
LINC00271-206ENST00000579944 SCUBE2Q9NQ36 999 aa13.18□□□□□ -0.3
LINC00271-206ENST00000579944 BMP2KQ9NSY1 1161 aaPredicted RBP13.16□□□□□ -0.3
LINC00271-206ENST00000579944 MIER1Q8N108 512 aa13.15□□□□□ -0.3
LINC00271-206ENST00000579944 MAP3K13O43283 966 aa13.14□□□□□ -0.31
LINC00271-206ENST00000579944 TRPC6Q9Y210 931 aa13.14□□□□□ -0.31
LINC00271-206ENST00000579944 PCDH10Q9P2E7 1040 aa13.13□□□□□ -0.31
LINC00271-206ENST00000579944 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
LINC00271-206ENST00000579944 TIE1P35590 1138 aa13.11□□□□□ -0.31
LINC00271-206ENST00000579944 POTEFA5A3E0 1075 aa13.1□□□□□ -0.31
LINC00271-206ENST00000579944 FAM163AQ96GL9 167 aaPredicted RBP13.08□□□□□ -0.32
LINC00271-206ENST00000579944 LCE2DQ5TA82 110 aaPredicted RBP13.07□□□□□ -0.32
LINC00271-206ENST00000579944 TTLL13PA6NNM8 815 aa13.03□□□□□ -0.32
LINC00271-206ENST00000579944 SEC24BO95487 1268 aa13.02□□□□□ -0.33
LINC00271-206ENST00000579944 PLCD3Q8N3E9 789 aa13.02□□□□□ -0.33
LINC00271-206ENST00000579944 COLQQ9Y215 455 aaPredicted RBP12.99□□□□□ -0.33
LINC00271-206ENST00000579944 PCDHB13Q9Y5F0 798 aa12.98□□□□□ -0.33
LINC00271-206ENST00000579944 SGIP1Q9BQI5 828 aa12.97□□□□□ -0.33
LINC00271-206ENST00000579944 TRIM35Q9UPQ4 493 aa12.96□□□□□ -0.33
LINC00271-206ENST00000579944 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
LINC00271-206ENST00000579944 IER5LQ5T953 404 aa12.94□□□□□ -0.34
LINC00271-206ENST00000579944 NUBP1P53384 320 aa12.91□□□□□ -0.34
LINC00271-206ENST00000579944 IFNL1Q8IU54 200 aa12.88□□□□□ -0.35
LINC00271-206ENST00000579944 FAM212AQ96EL1 285 aa12.86□□□□□ -0.35
LINC00271-206ENST00000579944 TMEM106CQ9BVX2 250 aa12.84□□□□□ -0.35
LINC00271-206ENST00000579944 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
LINC00271-206ENST00000579944 PLCG2P16885 1265 aa12.8□□□□□ -0.36
LINC00271-206ENST00000579944 CDAN1Q8IWY9 1227 aa12.8□□□□□ -0.36
LINC00271-206ENST00000579944 ST18O60284 1047 aa12.75□□□□□ -0.37
LINC00271-206ENST00000579944 IRX5P78411 483 aaPredicted RBP12.74□□□□□ -0.37
LINC00271-206ENST00000579944 FKBP8Q14318 412 aa12.72□□□□□ -0.37
LINC00271-206ENST00000579944 DCAF8Q5TAQ9 597 aa12.7□□□□□ -0.38
LINC00271-206ENST00000579944 PYGBP11216 843 aa12.69□□□□□ -0.38
LINC00271-206ENST00000579944 OCEL1Q9H607 264 aa12.67□□□□□ -0.38
LINC00271-206ENST00000579944 PCDHB8Q9UN66 801 aa12.63□□□□□ -0.39
LINC00271-206ENST00000579944 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.61□□□□□ -0.39
LINC00271-206ENST00000579944 SNPHO15079 494 aa12.59□□□□□ -0.39
LINC00271-206ENST00000579944 TMEM121BQ9BXQ6 578 aaPredicted RBP12.59□□□□□ -0.39
LINC00271-206ENST00000579944 FBXO3Q9UK99 471 aa12.57□□□□□ -0.4
LINC00271-206ENST00000579944 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
LINC00271-206ENST00000579944 ZNF467Q7Z7K2 595 aaPredicted RBP12.5□□□□□ -0.41
LINC00271-206ENST00000579944 MARVELD3Q96A59 401 aa12.5□□□□□ -0.41
LINC00271-206ENST00000579944 GSE1Q14687 1217 aa12.49□□□□□ -0.41
LINC00271-206ENST00000579944 C3orf67Q6ZVT6 689 aa12.49□□□□□ -0.41
LINC00271-206ENST00000579944 PDCD7Q8N8D1 485 aaKnown RBP12.49□□□□□ -0.41
LINC00271-206ENST00000579944 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
LINC00271-206ENST00000579944 MMRN1Q13201 1228 aa12.48□□□□□ -0.41
LINC00271-206ENST00000579944 SPNS2Q8IVW8 549 aa12.48□□□□□ -0.41
LINC00271-206ENST00000579944 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
LINC00271-206ENST00000579944 L3MBTL3Q96JM7 780 aaPredicted RBP12.45□□□□□ -0.42
LINC00271-206ENST00000579944 VASPP50552 380 aaPredicted RBP12.41□□□□□ -0.42
LINC00271-206ENST00000579944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC00271-206ENST00000579944 CHRM1P11229 460 aaPredicted RBP12.4□□□□□ -0.42
LINC00271-206ENST00000579944 EMP3P54852 163 aa12.4□□□□□ -0.42
LINC00271-206ENST00000579944 PSEN1P49768 467 aa12.39□□□□□ -0.43
LINC00271-206ENST00000579944 HS3ST6Q96QI5 342 aa12.32□□□□□ -0.44
LINC00271-206ENST00000579944 FAM205CA6NFA0 338 aa12.3□□□□□ -0.44
LINC00271-206ENST00000579944 PDAP1Q13442 181 aaKnown RBP12.3□□□□□ -0.44
LINC00271-206ENST00000579944 ILDR1Q86SU0 546 aaPredicted RBP12.29□□□□□ -0.44
LINC00271-206ENST00000579944 POTEB3A0JP26 581 aa12.27□□□□□ -0.45
LINC00271-206ENST00000579944 G3V3G9 751 aa12.27□□□□□ -0.45
LINC00271-206ENST00000579944 DPY19L2Q6NUT2 758 aa12.27□□□□□ -0.45
LINC00271-206ENST00000579944 POTEBQ6S5H4 581 aa12.27□□□□□ -0.45
LINC00271-206ENST00000579944 KRTAP3-3Q9BYR6 98 aa12.27□□□□□ -0.45
LINC00271-206ENST00000579944 KRTAP3-2Q9BYR7 98 aa12.27□□□□□ -0.45
LINC00271-206ENST00000579944 CABP2Q9NPB3 220 aa12.26□□□□□ -0.45
LINC00271-206ENST00000579944 BOLA1Q9Y3E2 137 aa12.23□□□□□ -0.45
LINC00271-206ENST00000579944 CIZ1Q9ULV3 898 aaPredicted RBP12.22□□□□□ -0.45
LINC00271-206ENST00000579944 SPOCK2Q92563 424 aa12.2□□□□□ -0.46
LINC00271-206ENST00000579944 HOXB3P14651 431 aaPredicted RBP12.18□□□□□ -0.46
LINC00271-206ENST00000579944 ZNF710Q8N1W2 664 aa12.16□□□□□ -0.46
LINC00271-206ENST00000579944 IFNLR1Q8IU57 520 aaPredicted RBP12.15□□□□□ -0.46
LINC00271-206ENST00000579944 HOXB1P14653 301 aaPredicted RBP12.13□□□□□ -0.47
LINC00271-206ENST00000579944 DOK7Q18PE1 504 aa12.13□□□□□ -0.47
LINC00271-206ENST00000579944 ERBB3P21860 1342 aa12.11□□□□□ -0.47
LINC00271-206ENST00000579944 RIMBP2O15034 1052 aa12.06□□□□□ -0.48
LINC00271-206ENST00000579944 EFCAB3Q8N7B9 438 aa12.06□□□□□ -0.48
LINC00271-206ENST00000579944 VARS2Q5ST30 1063 aaKnown RBP12.01□□□□□ -0.49
LINC00271-206ENST00000579944 TRIM41Q8WV44 630 aa12.01□□□□□ -0.49
LINC00271-206ENST00000579944 RNF166Q96A37 237 aaPredicted RBP12□□□□□ -0.49
LINC00271-206ENST00000579944 MICALL2Q8IY33 904 aa11.99□□□□□ -0.49
LINC00271-206ENST00000579944 ZSWIM6Q9HCJ5 1215 aa11.97□□□□□ -0.49
LINC00271-206ENST00000579944 TMEM92Q6UXU6 159 aa11.96□□□□□ -0.49
LINC00271-206ENST00000579944 MYT1LQ9UL68 1186 aa11.93□□□□□ -0.5
LINC00271-206ENST00000579944 SOX12O15370 315 aa11.92□□□□□ -0.5
LINC00271-206ENST00000579944 ZNF687Q8N1G0 1237 aa11.92□□□□□ -0.5
LINC00271-206ENST00000579944 GPR153Q6NV75 609 aa11.9□□□□□ -0.5
LINC00271-206ENST00000579944 RIOK3O14730 519 aaKnown RBP11.88□□□□□ -0.51
LINC00271-206ENST00000579944 MS4A4AQ96JQ5 239 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms