RNA–Protein interactions for RNA: ENST00000579245.1

ARHGAP28-209, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 3

Gene ARHGAP28, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-209ENST00000579245 FAM212AQ96EL1 285 aa11.61□□□□□ -0.55
ARHGAP28-209ENST00000579245 RNF25Q96BH1 459 aaPredicted RBP11.58□□□□□ -0.56
ARHGAP28-209ENST00000579245 RASEFQ8IZ41 740 aa11.57□□□□□ -0.56
ARHGAP28-209ENST00000579245 SPRYD3Q8NCJ5 442 aa11.55□□□□□ -0.56
ARHGAP28-209ENST00000579245 CHADLQ6NUI6 762 aa11.54□□□□□ -0.56
ARHGAP28-209ENST00000579245 RIOK3O14730 519 aaKnown RBP11.52□□□□□ -0.57
ARHGAP28-209ENST00000579245 VSIG10Q8N0Z9 540 aa11.52□□□□□ -0.57
ARHGAP28-209ENST00000579245 HS6ST3Q8IZP7 471 aa11.51□□□□□ -0.57
ARHGAP28-209ENST00000579245 TAOK2Q9UL54 1235 aa11.49□□□□□ -0.57
ARHGAP28-209ENST00000579245 PYGBP11216 843 aa11.47□□□□□ -0.57
ARHGAP28-209ENST00000579245 CHRM1P11229 460 aaPredicted RBP11.46□□□□□ -0.57
ARHGAP28-209ENST00000579245 VGFO15240 615 aaPredicted RBP11.44□□□□□ -0.58
ARHGAP28-209ENST00000579245 TSPYL2Q9H2G4 693 aaPredicted RBP11.43□□□□□ -0.58
ARHGAP28-209ENST00000579245 TSHZ2Q9NRE2 1034 aa11.43□□□□□ -0.58
ARHGAP28-209ENST00000579245 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
ARHGAP28-209ENST00000579245 FARP1Q9Y4F1 1045 aaPredicted RBP11.43□□□□□ -0.58
ARHGAP28-209ENST00000579245 STK25O00506 426 aa11.42□□□□□ -0.58
ARHGAP28-209ENST00000579245 PRKAR2AP13861 404 aaKnown RBP11.41□□□□□ -0.58
ARHGAP28-209ENST00000579245 DNAJC5Q9H3Z4 198 aa11.38□□□□□ -0.59
ARHGAP28-209ENST00000579245 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.37□□□□□ -0.59
ARHGAP28-209ENST00000579245 NKX1-1Q15270 411 aaPredicted RBP11.37□□□□□ -0.59
ARHGAP28-209ENST00000579245 ZFP91Q96JP5 570 aaPredicted RBP11.37□□□□□ -0.59
ARHGAP28-209ENST00000579245 STK24Q9Y6E0 443 aa11.36□□□□□ -0.59
ARHGAP28-209ENST00000579245 FXR2P51116 673 aaKnown RBP eCLIP11.34□□□□□ -0.59
ARHGAP28-209ENST00000579245 BCANQ96GW7 911 aa11.34□□□□□ -0.59
ARHGAP28-209ENST00000579245 BCL11BQ9C0K0 894 aaPredicted RBP11.34□□□□□ -0.59
ARHGAP28-209ENST00000579245 SGIP1Q9BQI5 828 aa11.33□□□□□ -0.6
ARHGAP28-209ENST00000579245 GTPBP6O43824 516 aaPredicted RBP11.3□□□□□ -0.6
ARHGAP28-209ENST00000579245 CHRDL2Q6WN34 429 aa11.3□□□□□ -0.6
ARHGAP28-209ENST00000579245 ZNF467Q7Z7K2 595 aaPredicted RBP11.28□□□□□ -0.6
ARHGAP28-209ENST00000579245 PIP4P2Q8N4L2 257 aa11.26□□□□□ -0.61
ARHGAP28-209ENST00000579245 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
ARHGAP28-209ENST00000579245 PCDHB8Q9UN66 801 aa11.25□□□□□ -0.61
ARHGAP28-209ENST00000579245 PCDHB13Q9Y5F0 798 aa11.25□□□□□ -0.61
ARHGAP28-209ENST00000579245 CCDC61Q9Y6R9 512 aa11.25□□□□□ -0.61
ARHGAP28-209ENST00000579245 PDAP1Q13442 181 aaKnown RBP11.22□□□□□ -0.61
ARHGAP28-209ENST00000579245 RYDENQ9NUL5 291 aaKnown RBP11.19□□□□□ -0.62
ARHGAP28-209ENST00000579245 PSEN1P49768 467 aa11.18□□□□□ -0.62
ARHGAP28-209ENST00000579245 ZNF579Q8NAF0 562 aaKnown RBP11.18□□□□□ -0.62
ARHGAP28-209ENST00000579245 MAP3K13O43283 966 aa11.15□□□□□ -0.62
ARHGAP28-209ENST00000579245 IFNL1Q8IU54 200 aa11.14□□□□□ -0.63
ARHGAP28-209ENST00000579245 KIF12Q96FN5 646 aa11.13□□□□□ -0.63
ARHGAP28-209ENST00000579245 ZRANB1Q9UGI0 708 aa11.13□□□□□ -0.63
ARHGAP28-209ENST00000579245 PRKCSHP14314 528 aaPredicted RBP11.1□□□□□ -0.63
ARHGAP28-209ENST00000579245 CD44P16070 742 aaKnown RBP11.1□□□□□ -0.63
ARHGAP28-209ENST00000579245 NBR1Q14596 966 aa11.06□□□□□ -0.64
ARHGAP28-209ENST00000579245 PHF12Q96QT6 1004 aa11.06□□□□□ -0.64
ARHGAP28-209ENST00000579245 MFRPQ9BY79 579 aa11.05□□□□□ -0.64
ARHGAP28-209ENST00000579245 CABP2Q9NPB3 220 aa11.05□□□□□ -0.64
ARHGAP28-209ENST00000579245 EFCAB3Q8N7B9 438 aa11.04□□□□□ -0.64
ARHGAP28-209ENST00000579245 TPRNQ4KMQ1 711 aa11.02□□□□□ -0.65
ARHGAP28-209ENST00000579245 CADPS2Q86UW7 1296 aa10.99□□□□□ -0.65
ARHGAP28-209ENST00000579245 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
ARHGAP28-209ENST00000579245 SOX12O15370 315 aa10.97□□□□□ -0.65
ARHGAP28-209ENST00000579245 NLRP6P59044 892 aa10.97□□□□□ -0.65
ARHGAP28-209ENST00000579245 PPP1R37O75864 691 aa10.96□□□□□ -0.65
ARHGAP28-209ENST00000579245 WDR70Q9NW82 654 aa10.96□□□□□ -0.65
ARHGAP28-209ENST00000579245 C19orf67A6NJJ6 358 aa10.94□□□□□ -0.66
ARHGAP28-209ENST00000579245 FBXO22Q8NEZ5 403 aa10.94□□□□□ -0.66
ARHGAP28-209ENST00000579245 MS4A3Q96HJ5 214 aa10.93□□□□□ -0.66
ARHGAP28-209ENST00000579245 TMEM106CQ9BVX2 250 aa10.93□□□□□ -0.66
ARHGAP28-209ENST00000579245 TRPC6Q9Y210 931 aa10.93□□□□□ -0.66
ARHGAP28-209ENST00000579245 GOLGA2Q08379 1002 aa10.92□□□□□ -0.66
ARHGAP28-209ENST00000579245 P3H3Q8IVL6 736 aa10.89□□□□□ -0.67
ARHGAP28-209ENST00000579245 MKRN3Q13064 507 aaKnown RBP10.86□□□□□ -0.67
ARHGAP28-209ENST00000579245 KCNV2Q8TDN2 545 aa10.84□□□□□ -0.67
ARHGAP28-209ENST00000579245 MS4A4AQ96JQ5 239 aa10.84□□□□□ -0.67
ARHGAP28-209ENST00000579245 HAX1O00165 279 aa10.81□□□□□ -0.68
ARHGAP28-209ENST00000579245 TIE1P35590 1138 aa10.81□□□□□ -0.68
ARHGAP28-209ENST00000579245 TTLL13PA6NNM8 815 aa10.8□□□□□ -0.68
ARHGAP28-209ENST00000579245 GALR2O43603 387 aaPredicted RBP10.78□□□□□ -0.68
ARHGAP28-209ENST00000579245 BMP2KQ9NSY1 1161 aaPredicted RBP10.78□□□□□ -0.68
ARHGAP28-209ENST00000579245 LARP6Q9BRS8 491 aaKnown RBP10.76□□□□□ -0.69
ARHGAP28-209ENST00000579245 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.76□□□□□ -0.69
ARHGAP28-209ENST00000579245 PDE4AP27815 886 aa10.75□□□□□ -0.69
ARHGAP28-209ENST00000579245 EVX2Q03828 476 aa10.75□□□□□ -0.69
ARHGAP28-209ENST00000579245 E2F4Q16254 413 aa10.75□□□□□ -0.69
ARHGAP28-209ENST00000579245 TRIM35Q9UPQ4 493 aa10.75□□□□□ -0.69
ARHGAP28-209ENST00000579245 NCKAP5LQ9HCH0 1330 aa10.75□□□□□ -0.69
ARHGAP28-209ENST00000579245 ARHGEF1Q92888 912 aaKnown RBP10.7□□□□□ -0.7
ARHGAP28-209ENST00000579245 DDX27Q96GQ7 796 aaKnown RBP10.69□□□□□ -0.7
ARHGAP28-209ENST00000579245 CRISPLD2Q9H0B8 497 aa10.69□□□□□ -0.7
ARHGAP28-209ENST00000579245 CLCN6P51797 869 aa10.68□□□□□ -0.7
ARHGAP28-209ENST00000579245 ILDR1Q86SU0 546 aaPredicted RBP10.68□□□□□ -0.7
ARHGAP28-209ENST00000579245 ATN1P54259 1190 aaPredicted RBP10.66□□□□□ -0.7
ARHGAP28-209ENST00000579245 MFSD10Q14728 455 aa10.66□□□□□ -0.7
ARHGAP28-209ENST00000579245 DPY19L2Q6NUT2 758 aa10.66□□□□□ -0.7
ARHGAP28-209ENST00000579245 LMOD2Q6P5Q4 547 aa10.65□□□□□ -0.7
ARHGAP28-209ENST00000579245 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.64□□□□□ -0.71
ARHGAP28-209ENST00000579245 TULP1O00294 542 aaPredicted RBP10.63□□□□□ -0.71
ARHGAP28-209ENST00000579245 SEMA3EO15041 775 aa10.63□□□□□ -0.71
ARHGAP28-209ENST00000579245 ATMINO43313 823 aaPredicted RBP10.62□□□□□ -0.71
ARHGAP28-209ENST00000579245 ASTLQ6HA08 431 aaPredicted RBP10.59□□□□□ -0.71
ARHGAP28-209ENST00000579245 MICALL2Q8IY33 904 aa10.59□□□□□ -0.71
ARHGAP28-209ENST00000579245 PDCD7Q8N8D1 485 aaKnown RBP10.59□□□□□ -0.71
ARHGAP28-209ENST00000579245 GPHNQ9NQX3 736 aaPredicted RBP10.59□□□□□ -0.71
ARHGAP28-209ENST00000579245 PPP1R15BQ5SWA1 713 aa10.58□□□□□ -0.72
ARHGAP28-209ENST00000579245 OCEL1Q9H607 264 aa10.58□□□□□ -0.72
ARHGAP28-209ENST00000579245 IRX5P78411 483 aaPredicted RBP10.57□□□□□ -0.72
ARHGAP28-209ENST00000579245 CAMK2BQ13554 666 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms