RNA–Protein interactions for RNA: ENST00000579021.1

RTTN-203, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-203ENST00000579021 SLC39A7Q92504 469 aa12.62□□□□□ -0.39
RTTN-203ENST00000579021 ATMINO43313 823 aaPredicted RBP12.61□□□□□ -0.39
RTTN-203ENST00000579021 POTEJP0CG39 1038 aa12.6□□□□□ -0.39
RTTN-203ENST00000579021 C7P10643 843 aa12.59□□□□□ -0.39
RTTN-203ENST00000579021 PCDH10Q9P2E7 1040 aa12.56□□□□□ -0.4
RTTN-203ENST00000579021 MAMSTRQ6ZN01 415 aa12.55□□□□□ -0.4
RTTN-203ENST00000579021 LCE2DQ5TA82 110 aaPredicted RBP12.5□□□□□ -0.41
RTTN-203ENST00000579021 ATN1P54259 1190 aaPredicted RBP12.49□□□□□ -0.41
RTTN-203ENST00000579021 TSPYL2Q9H2G4 693 aaPredicted RBP12.49□□□□□ -0.41
RTTN-203ENST00000579021 FAM163AQ96GL9 167 aaPredicted RBP12.46□□□□□ -0.41
RTTN-203ENST00000579021 SCUBE2Q9NQ36 999 aa12.46□□□□□ -0.41
RTTN-203ENST00000579021 CCDC61Q9Y6R9 512 aa12.44□□□□□ -0.42
RTTN-203ENST00000579021 KIF12Q96FN5 646 aa12.4□□□□□ -0.42
RTTN-203ENST00000579021 POTEFA5A3E0 1075 aa12.39□□□□□ -0.43
RTTN-203ENST00000579021 BMP2KQ9NSY1 1161 aaPredicted RBP12.39□□□□□ -0.43
RTTN-203ENST00000579021 TRPC6Q9Y210 931 aa12.37□□□□□ -0.43
RTTN-203ENST00000579021 EHMT2Q96KQ7 1210 aa12.32□□□□□ -0.44
RTTN-203ENST00000579021 MAP3K13O43283 966 aa12.31□□□□□ -0.44
RTTN-203ENST00000579021 TIE1P35590 1138 aa12.31□□□□□ -0.44
RTTN-203ENST00000579021 PROM2Q8N271 834 aa12.3□□□□□ -0.44
RTTN-203ENST00000579021 COLQQ9Y215 455 aaPredicted RBP12.27□□□□□ -0.45
RTTN-203ENST00000579021 SEC24BO95487 1268 aa12.25□□□□□ -0.45
RTTN-203ENST00000579021 TTLL13PA6NNM8 815 aa12.24□□□□□ -0.45
RTTN-203ENST00000579021 RASEFQ8IZ41 740 aa12.24□□□□□ -0.45
RTTN-203ENST00000579021 CDAN1Q8IWY9 1227 aa12.21□□□□□ -0.45
RTTN-203ENST00000579021 PLEKHG5O94827 1062 aa12.2□□□□□ -0.46
RTTN-203ENST00000579021 MIER1Q8N108 512 aa12.18□□□□□ -0.46
RTTN-203ENST00000579021 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
RTTN-203ENST00000579021 IER5LQ5T953 404 aa12.15□□□□□ -0.46
RTTN-203ENST00000579021 SLAIN1Q8ND83 568 aa12.12□□□□□ -0.47
RTTN-203ENST00000579021 PCDHB13Q9Y5F0 798 aa12.12□□□□□ -0.47
RTTN-203ENST00000579021 SGIP1Q9BQI5 828 aa12.1□□□□□ -0.47
RTTN-203ENST00000579021 ST18O60284 1047 aa12.09□□□□□ -0.47
RTTN-203ENST00000579021 IFNL1Q8IU54 200 aa12.03□□□□□ -0.48
RTTN-203ENST00000579021 PLCD3Q8N3E9 789 aa12.03□□□□□ -0.48
RTTN-203ENST00000579021 PLCG2P16885 1265 aa12.02□□□□□ -0.49
RTTN-203ENST00000579021 TMEM106CQ9BVX2 250 aa12.01□□□□□ -0.49
RTTN-203ENST00000579021 NUBP1P53384 320 aa11.99□□□□□ -0.49
RTTN-203ENST00000579021 ZBTB47Q9UFB7 747 aaPredicted RBP11.96□□□□□ -0.49
RTTN-203ENST00000579021 IRX5P78411 483 aaPredicted RBP11.95□□□□□ -0.5
RTTN-203ENST00000579021 MMRN1Q13201 1228 aa11.94□□□□□ -0.5
RTTN-203ENST00000579021 FAM212AQ96EL1 285 aa11.93□□□□□ -0.5
RTTN-203ENST00000579021 SPNS2Q8IVW8 549 aa11.92□□□□□ -0.5
RTTN-203ENST00000579021 TMEM121BQ9BXQ6 578 aaPredicted RBP11.91□□□□□ -0.5
RTTN-203ENST00000579021 OCEL1Q9H607 264 aa11.87□□□□□ -0.51
RTTN-203ENST00000579021 SNPHO15079 494 aa11.86□□□□□ -0.51
RTTN-203ENST00000579021 MARVELD3Q96A59 401 aa11.86□□□□□ -0.51
RTTN-203ENST00000579021 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.86□□□□□ -0.51
RTTN-203ENST00000579021 PYGBP11216 843 aa11.79□□□□□ -0.52
RTTN-203ENST00000579021 DCAF8Q5TAQ9 597 aa11.77□□□□□ -0.53
RTTN-203ENST00000579021 PCDHB8Q9UN66 801 aa11.77□□□□□ -0.53
RTTN-203ENST00000579021 EMP3P54852 163 aa11.73□□□□□ -0.53
RTTN-203ENST00000579021 C3orf67Q6ZVT6 689 aa11.71□□□□□ -0.53
RTTN-203ENST00000579021 PDCD7Q8N8D1 485 aaKnown RBP11.71□□□□□ -0.53
RTTN-203ENST00000579021 KRTAP3-3Q9BYR6 98 aa11.67□□□□□ -0.54
RTTN-203ENST00000579021 KRTAP3-2Q9BYR7 98 aa11.67□□□□□ -0.54
RTTN-203ENST00000579021 HS3ST6Q96QI5 342 aa11.66□□□□□ -0.54
RTTN-203ENST00000579021 POTEB3A0JP26 581 aa11.65□□□□□ -0.54
RTTN-203ENST00000579021 POTEBQ6S5H4 581 aa11.65□□□□□ -0.54
RTTN-203ENST00000579021 FAM205CA6NFA0 338 aa11.64□□□□□ -0.55
RTTN-203ENST00000579021 L3MBTL3Q96JM7 780 aaPredicted RBP11.64□□□□□ -0.55
RTTN-203ENST00000579021 GOLGA2Q08379 1002 aa11.63□□□□□ -0.55
RTTN-203ENST00000579021 MKRN3Q13064 507 aaKnown RBP11.63□□□□□ -0.55
RTTN-203ENST00000579021 ZNF467Q7Z7K2 595 aaPredicted RBP11.6□□□□□ -0.55
RTTN-203ENST00000579021 FKBP8Q14318 412 aa11.59□□□□□ -0.55
RTTN-203ENST00000579021 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.59□□□□□ -0.55
RTTN-203ENST00000579021 PSEN1P49768 467 aa11.52□□□□□ -0.57
RTTN-203ENST00000579021 GSE1Q14687 1217 aa11.52□□□□□ -0.57
RTTN-203ENST00000579021 DPY19L2Q6NUT2 758 aa11.48□□□□□ -0.57
RTTN-203ENST00000579021 ILDR1Q86SU0 546 aaPredicted RBP11.48□□□□□ -0.57
RTTN-203ENST00000579021 FBXO3Q9UK99 471 aa11.47□□□□□ -0.57
RTTN-203ENST00000579021 CHRM1P11229 460 aaPredicted RBP11.46□□□□□ -0.57
RTTN-203ENST00000579021 HOXB3P14651 431 aaPredicted RBP11.46□□□□□ -0.57
RTTN-203ENST00000579021 KLHL34Q8N239 644 aa11.46□□□□□ -0.57
RTTN-203ENST00000579021 G3V3G9 751 aa11.43□□□□□ -0.58
RTTN-203ENST00000579021 PDAP1Q13442 181 aaKnown RBP11.42□□□□□ -0.58
RTTN-203ENST00000579021 BOLA1Q9Y3E2 137 aa11.42□□□□□ -0.58
RTTN-203ENST00000579021 HOXB1P14653 301 aaPredicted RBP11.41□□□□□ -0.58
RTTN-203ENST00000579021 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
RTTN-203ENST00000579021 CABP2Q9NPB3 220 aa11.4□□□□□ -0.58
RTTN-203ENST00000579021 ERBB3P21860 1342 aa11.39□□□□□ -0.59
RTTN-203ENST00000579021 RNF166Q96A37 237 aaPredicted RBP11.39□□□□□ -0.59
RTTN-203ENST00000579021 VASPP50552 380 aaPredicted RBP11.37□□□□□ -0.59
RTTN-203ENST00000579021 DOK7Q18PE1 504 aa11.36□□□□□ -0.59
RTTN-203ENST00000579021 VARS2Q5ST30 1063 aaKnown RBP11.32□□□□□ -0.6
RTTN-203ENST00000579021 MYT1LQ9UL68 1186 aa11.31□□□□□ -0.6
RTTN-203ENST00000579021 RIMBP2O15034 1052 aa11.29□□□□□ -0.6
RTTN-203ENST00000579021 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
RTTN-203ENST00000579021 ZNF687Q8N1G0 1237 aa11.22□□□□□ -0.61
RTTN-203ENST00000579021 TMEM92Q6UXU6 159 aa11.2□□□□□ -0.62
RTTN-203ENST00000579021 ZSWIM6Q9HCJ5 1215 aa11.2□□□□□ -0.62
RTTN-203ENST00000579021 EFCAB3Q8N7B9 438 aa11.19□□□□□ -0.62
RTTN-203ENST00000579021 SPOCK2Q92563 424 aa11.19□□□□□ -0.62
RTTN-203ENST00000579021 MICALL2Q8IY33 904 aa11.17□□□□□ -0.62
RTTN-203ENST00000579021 PTGER2P43116 358 aa11.16□□□□□ -0.62
RTTN-203ENST00000579021 GPR153Q6NV75 609 aa11.16□□□□□ -0.62
RTTN-203ENST00000579021 IFNLR1Q8IU57 520 aaPredicted RBP11.12□□□□□ -0.63
RTTN-203ENST00000579021 ANKRD13DQ6ZTN6 518 aa11.11□□□□□ -0.63
RTTN-203ENST00000579021 ARSIQ5FYB1 569 aa11.08□□□□□ -0.64
RTTN-203ENST00000579021 MS4A4AQ96JQ5 239 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms