RNA–Protein interactions for RNA: ENST00000578886.1

TRAPPC8-206, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-206ENST00000578886 MS4A3Q96HJ5 214 aa14.15□□□□□ -0.14
TRAPPC8-206ENST00000578886 SLC39A7Q92504 469 aa14.13□□□□□ -0.15
TRAPPC8-206ENST00000578886 C7P10643 843 aa14.11□□□□□ -0.15
TRAPPC8-206ENST00000578886 ATMINO43313 823 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC8-206ENST00000578886 MAMSTRQ6ZN01 415 aa14.06□□□□□ -0.16
TRAPPC8-206ENST00000578886 PCDH10Q9P2E7 1040 aa14.05□□□□□ -0.16
TRAPPC8-206ENST00000578886 POTEJP0CG39 1038 aa14.03□□□□□ -0.16
TRAPPC8-206ENST00000578886 TSPYL2Q9H2G4 693 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC8-206ENST00000578886 SCUBE2Q9NQ36 999 aa13.97□□□□□ -0.17
TRAPPC8-206ENST00000578886 CCDC61Q9Y6R9 512 aa13.96□□□□□ -0.17
TRAPPC8-206ENST00000578886 ATN1P54259 1190 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC8-206ENST00000578886 LCE2DQ5TA82 110 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC8-206ENST00000578886 PROM2Q8N271 834 aa13.9□□□□□ -0.18
TRAPPC8-206ENST00000578886 KIF12Q96FN5 646 aa13.89□□□□□ -0.19
TRAPPC8-206ENST00000578886 BMP2KQ9NSY1 1161 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC8-206ENST00000578886 FAM163AQ96GL9 167 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC8-206ENST00000578886 POTEFA5A3E0 1075 aa13.82□□□□□ -0.2
TRAPPC8-206ENST00000578886 TIE1P35590 1138 aa13.82□□□□□ -0.2
TRAPPC8-206ENST00000578886 TRPC6Q9Y210 931 aa13.8□□□□□ -0.2
TRAPPC8-206ENST00000578886 PLEKHG5O94827 1062 aa13.79□□□□□ -0.2
TRAPPC8-206ENST00000578886 MAP3K13O43283 966 aa13.78□□□□□ -0.2
TRAPPC8-206ENST00000578886 RASEFQ8IZ41 740 aa13.73□□□□□ -0.21
TRAPPC8-206ENST00000578886 SEC24BO95487 1268 aa13.72□□□□□ -0.21
TRAPPC8-206ENST00000578886 TTLL13PA6NNM8 815 aa13.71□□□□□ -0.21
TRAPPC8-206ENST00000578886 MIER1Q8N108 512 aa13.69□□□□□ -0.22
TRAPPC8-206ENST00000578886 COLQQ9Y215 455 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC8-206ENST00000578886 IER5LQ5T953 404 aa13.66□□□□□ -0.22
TRAPPC8-206ENST00000578886 SGIP1Q9BQI5 828 aa13.65□□□□□ -0.22
TRAPPC8-206ENST00000578886 TRIM35Q9UPQ4 493 aa13.63□□□□□ -0.23
TRAPPC8-206ENST00000578886 CDAN1Q8IWY9 1227 aa13.6□□□□□ -0.23
TRAPPC8-206ENST00000578886 PCDHB13Q9Y5F0 798 aa13.6□□□□□ -0.23
TRAPPC8-206ENST00000578886 PLCD3Q8N3E9 789 aa13.55□□□□□ -0.24
TRAPPC8-206ENST00000578886 SLAIN1Q8ND83 568 aa13.54□□□□□ -0.24
TRAPPC8-206ENST00000578886 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC8-206ENST00000578886 IFNL1Q8IU54 200 aa13.5□□□□□ -0.25
TRAPPC8-206ENST00000578886 ST18O60284 1047 aa13.49□□□□□ -0.25
TRAPPC8-206ENST00000578886 NUBP1P53384 320 aa13.48□□□□□ -0.25
TRAPPC8-206ENST00000578886 PLCG2P16885 1265 aa13.47□□□□□ -0.25
TRAPPC8-206ENST00000578886 TMEM106CQ9BVX2 250 aa13.47□□□□□ -0.25
TRAPPC8-206ENST00000578886 FAM212AQ96EL1 285 aa13.45□□□□□ -0.26
TRAPPC8-206ENST00000578886 IRX5P78411 483 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC8-206ENST00000578886 TMEM121BQ9BXQ6 578 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC8-206ENST00000578886 OCEL1Q9H607 264 aa13.33□□□□□ -0.28
TRAPPC8-206ENST00000578886 SNPHO15079 494 aa13.31□□□□□ -0.28
TRAPPC8-206ENST00000578886 MMRN1Q13201 1228 aa13.3□□□□□ -0.28
TRAPPC8-206ENST00000578886 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.29□□□□□ -0.28
TRAPPC8-206ENST00000578886 SPNS2Q8IVW8 549 aa13.28□□□□□ -0.28
TRAPPC8-206ENST00000578886 PYGBP11216 843 aa13.23□□□□□ -0.29
TRAPPC8-206ENST00000578886 DCAF8Q5TAQ9 597 aa13.21□□□□□ -0.29
TRAPPC8-206ENST00000578886 MARVELD3Q96A59 401 aa13.21□□□□□ -0.29
TRAPPC8-206ENST00000578886 PCDHB8Q9UN66 801 aa13.18□□□□□ -0.3
TRAPPC8-206ENST00000578886 C3orf67Q6ZVT6 689 aa13.15□□□□□ -0.3
TRAPPC8-206ENST00000578886 PDCD7Q8N8D1 485 aaKnown RBP13.13□□□□□ -0.31
TRAPPC8-206ENST00000578886 EMP3P54852 163 aa13.11□□□□□ -0.31
TRAPPC8-206ENST00000578886 GOLGA2Q08379 1002 aa13.09□□□□□ -0.31
TRAPPC8-206ENST00000578886 FKBP8Q14318 412 aa13.09□□□□□ -0.31
TRAPPC8-206ENST00000578886 L3MBTL3Q96JM7 780 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC8-206ENST00000578886 MKRN3Q13064 507 aaKnown RBP13.07□□□□□ -0.32
TRAPPC8-206ENST00000578886 ZNF467Q7Z7K2 595 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC8-206ENST00000578886 HS3ST6Q96QI5 342 aa13.03□□□□□ -0.32
TRAPPC8-206ENST00000578886 GSE1Q14687 1217 aa13.02□□□□□ -0.33
TRAPPC8-206ENST00000578886 KRTAP3-3Q9BYR6 98 aa13.01□□□□□ -0.33
TRAPPC8-206ENST00000578886 KRTAP3-2Q9BYR7 98 aa13.01□□□□□ -0.33
TRAPPC8-206ENST00000578886 FBXO3Q9UK99 471 aa13.01□□□□□ -0.33
TRAPPC8-206ENST00000578886 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13□□□□□ -0.333e-7■■□□□ 12.3
TRAPPC8-206ENST00000578886 FAM205CA6NFA0 338 aa12.99□□□□□ -0.33
TRAPPC8-206ENST00000578886 POTEB3A0JP26 581 aa12.97□□□□□ -0.33
TRAPPC8-206ENST00000578886 POTEBQ6S5H4 581 aa12.97□□□□□ -0.33
TRAPPC8-206ENST00000578886 CHRM1P11229 460 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC8-206ENST00000578886 PSEN1P49768 467 aa12.94□□□□□ -0.34
TRAPPC8-206ENST00000578886 ILDR1Q86SU0 546 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC8-206ENST00000578886 KLHL34Q8N239 644 aa12.91□□□□□ -0.34
TRAPPC8-206ENST00000578886 G3V3G9 751 aa12.86□□□□□ -0.35
TRAPPC8-206ENST00000578886 VASPP50552 380 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC8-206ENST00000578886 PDAP1Q13442 181 aaKnown RBP12.85□□□□□ -0.35
TRAPPC8-206ENST00000578886 HOXB3P14651 431 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC8-206ENST00000578886 DPY19L2Q6NUT2 758 aa12.83□□□□□ -0.36
TRAPPC8-206ENST00000578886 BOLA1Q9Y3E2 137 aa12.83□□□□□ -0.36
TRAPPC8-206ENST00000578886 HOXB1P14653 301 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC8-206ENST00000578886 ZNF710Q8N1W2 664 aa12.8□□□□□ -0.36
TRAPPC8-206ENST00000578886 CABP2Q9NPB3 220 aa12.8□□□□□ -0.36
TRAPPC8-206ENST00000578886 DOK7Q18PE1 504 aa12.77□□□□□ -0.37
TRAPPC8-206ENST00000578886 ERBB3P21860 1342 aa12.75□□□□□ -0.37
TRAPPC8-206ENST00000578886 RNF166Q96A37 237 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC8-206ENST00000578886 RIMBP2O15034 1052 aa12.7□□□□□ -0.38
TRAPPC8-206ENST00000578886 VARS2Q5ST30 1063 aaKnown RBP12.65□□□□□ -0.38
TRAPPC8-206ENST00000578886 CIZ1Q9ULV3 898 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC8-206ENST00000578886 SPOCK2Q92563 424 aa12.64□□□□□ -0.39
TRAPPC8-206ENST00000578886 MYT1LQ9UL68 1186 aa12.63□□□□□ -0.39
TRAPPC8-206ENST00000578886 ZSWIM6Q9HCJ5 1215 aa12.62□□□□□ -0.39
TRAPPC8-206ENST00000578886 ZNF687Q8N1G0 1237 aa12.58□□□□□ -0.4
TRAPPC8-206ENST00000578886 EFCAB3Q8N7B9 438 aa12.58□□□□□ -0.4
TRAPPC8-206ENST00000578886 PTGER2P43116 358 aa12.56□□□□□ -0.4
TRAPPC8-206ENST00000578886 IFNLR1Q8IU57 520 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC8-206ENST00000578886 MICALL2Q8IY33 904 aa12.55□□□□□ -0.4
TRAPPC8-206ENST00000578886 TMEM92Q6UXU6 159 aa12.53□□□□□ -0.4
TRAPPC8-206ENST00000578886 GPR153Q6NV75 609 aa12.51□□□□□ -0.41
TRAPPC8-206ENST00000578886 TRIM41Q8WV44 630 aa12.5□□□□□ -0.41
TRAPPC8-206ENST00000578886 SOX12O15370 315 aa12.44□□□□□ -0.42
TRAPPC8-206ENST00000578886 ANKRD13DQ6ZTN6 518 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms