RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 RANGAP1P46060 587 aaPredicted RBP7.8□□□□□ -1.16
GAPLINC-201ENST00000578664 PLEKHG5O94827 1062 aa7.79□□□□□ -1.16
GAPLINC-201ENST00000578664 FXR2P51116 673 aaKnown RBP eCLIP7.79□□□□□ -1.16
GAPLINC-201ENST00000578664 CHRDL2Q6WN34 429 aa7.79□□□□□ -1.16
GAPLINC-201ENST00000578664 KLHL34Q8N239 644 aa7.79□□□□□ -1.16
GAPLINC-201ENST00000578664 SPOCK2Q92563 424 aa7.79□□□□□ -1.16
GAPLINC-201ENST00000578664 ZBTB47Q9UFB7 747 aaPredicted RBP7.79□□□□□ -1.16
GAPLINC-201ENST00000578664 NBR1Q14596 966 aa7.78□□□□□ -1.16
GAPLINC-201ENST00000578664 C14orf37Q86TY3 774 aa7.77□□□□□ -1.17
GAPLINC-201ENST00000578664 CFAP44Q96MT7 982 aa7.77□□□□□ -1.17
GAPLINC-201ENST00000578664 SPRYD3Q8NCJ5 442 aa7.74□□□□□ -1.17
GAPLINC-201ENST00000578664 NPM1P06748 294 aaKnown RBP eCLIP7.73□□□□□ -1.17
GAPLINC-201ENST00000578664 NUBP1P53384 320 aa7.73□□□□□ -1.17
GAPLINC-201ENST00000578664 PIP4P2Q8N4L2 257 aa7.73□□□□□ -1.17
GAPLINC-201ENST00000578664 DNAJC5Q9H3Z4 198 aa7.73□□□□□ -1.17
GAPLINC-201ENST00000578664 TSHZ2Q9NRE2 1034 aa7.73□□□□□ -1.17
GAPLINC-201ENST00000578664 CHADLQ6NUI6 762 aa7.72□□□□□ -1.17
GAPLINC-201ENST00000578664 PRKAR2AP13861 404 aaKnown RBP7.71□□□□□ -1.18
GAPLINC-201ENST00000578664 FARP1Q9Y4F1 1045 aaPredicted RBP7.7□□□□□ -1.18
GAPLINC-201ENST00000578664 PODXL2Q9NZ53 605 aa7.68□□□□□ -1.18
GAPLINC-201ENST00000578664 RASEFQ8IZ41 740 aa7.65□□□□□ -1.18
GAPLINC-201ENST00000578664 GSE1Q14687 1217 aa7.63□□□□□ -1.19
GAPLINC-201ENST00000578664 ECM2O94769 699 aaPredicted RBP7.61□□□□□ -1.19
GAPLINC-201ENST00000578664 CIZ1Q9ULV3 898 aaPredicted RBP7.61□□□□□ -1.19
GAPLINC-201ENST00000578664 TRIM41Q8WV44 630 aa7.6□□□□□ -1.19
GAPLINC-201ENST00000578664 FAM212AQ96EL1 285 aa7.6□□□□□ -1.19
GAPLINC-201ENST00000578664 DCAF8Q5TAQ9 597 aa7.59□□□□□ -1.19
GAPLINC-201ENST00000578664 CHRM1P11229 460 aaPredicted RBP7.57□□□□□ -1.2
GAPLINC-201ENST00000578664 RGL2O15211 777 aa7.55□□□□□ -1.2
GAPLINC-201ENST00000578664 CCDC61Q9Y6R9 512 aa7.54□□□□□ -1.2
GAPLINC-201ENST00000578664 RNF25Q96BH1 459 aaPredicted RBP7.53□□□□□ -1.2
GAPLINC-201ENST00000578664 TSPYL2Q9H2G4 693 aaPredicted RBP7.53□□□□□ -1.2
GAPLINC-201ENST00000578664 C19orf67A6NJJ6 358 aa7.52□□□□□ -1.21
GAPLINC-201ENST00000578664 SUPT5HO00267 1087 aaKnown RBP7.51□□□□□ -1.21
GAPLINC-201ENST00000578664 NPM2Q86SE8 214 aaKnown RBP7.5□□□□□ -1.21
GAPLINC-201ENST00000578664 PYGBP11216 843 aa7.49□□□□□ -1.21
GAPLINC-201ENST00000578664 CD44P16070 742 aaKnown RBP7.49□□□□□ -1.21
GAPLINC-201ENST00000578664 PAK3O75914 559 aaPredicted RBP7.48□□□□□ -1.21
GAPLINC-201ENST00000578664 RIOK3O14730 519 aaKnown RBP7.47□□□□□ -1.21
GAPLINC-201ENST00000578664 CHGAP10645 457 aaKnown RBP7.45□□□□□ -1.22
GAPLINC-201ENST00000578664 KIF12Q96FN5 646 aa7.45□□□□□ -1.22
GAPLINC-201ENST00000578664 ZRANB1Q9UGI0 708 aa7.45□□□□□ -1.22
GAPLINC-201ENST00000578664 TRIM26Q12899 539 aaPredicted RBP7.44□□□□□ -1.22
GAPLINC-201ENST00000578664 ZNF579Q8NAF0 562 aaKnown RBP7.44□□□□□ -1.22
GAPLINC-201ENST00000578664 SGIP1Q9BQI5 828 aa7.44□□□□□ -1.22
GAPLINC-201ENST00000578664 VGFO15240 615 aaPredicted RBP7.42□□□□□ -1.22
GAPLINC-201ENST00000578664 EVX2Q03828 476 aa7.42□□□□□ -1.22
GAPLINC-201ENST00000578664 POTEHQ6S545 545 aa7.42□□□□□ -1.22
GAPLINC-201ENST00000578664 PHF12Q96QT6 1004 aa7.42□□□□□ -1.22
GAPLINC-201ENST00000578664 MAP3K13O43283 966 aa7.41□□□□□ -1.22
GAPLINC-201ENST00000578664 ZNF467Q7Z7K2 595 aaPredicted RBP7.41□□□□□ -1.22
GAPLINC-201ENST00000578664 HS6ST3Q8IZP7 471 aa7.41□□□□□ -1.22
GAPLINC-201ENST00000578664 UBTFP17480 764 aaKnown RBP7.4□□□□□ -1.22
GAPLINC-201ENST00000578664 HAX1O00165 279 aa7.39□□□□□ -1.23
GAPLINC-201ENST00000578664 HRCP23327 699 aa7.39□□□□□ -1.23
GAPLINC-201ENST00000578664 IFNL1Q8IU54 200 aa7.39□□□□□ -1.23
GAPLINC-201ENST00000578664 PCDHB8Q9UN66 801 aa7.39□□□□□ -1.23
GAPLINC-201ENST00000578664 PCDHB13Q9Y5F0 798 aa7.39□□□□□ -1.23
GAPLINC-201ENST00000578664 BRPF1P55201 1214 aaPredicted RBP7.38□□□□□ -1.23
GAPLINC-201ENST00000578664 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.36□□□□□ -1.23
GAPLINC-201ENST00000578664 PDAP1Q13442 181 aaKnown RBP7.36□□□□□ -1.23
GAPLINC-201ENST00000578664 ZFP91Q96JP5 570 aaPredicted RBP7.36□□□□□ -1.23
GAPLINC-201ENST00000578664 STK25O00506 426 aa7.33□□□□□ -1.24
GAPLINC-201ENST00000578664 PSEN1P49768 467 aa7.33□□□□□ -1.24
GAPLINC-201ENST00000578664 CLCN6P51797 869 aa7.33□□□□□ -1.24
GAPLINC-201ENST00000578664 MS4A3Q96HJ5 214 aa7.33□□□□□ -1.24
GAPLINC-201ENST00000578664 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.32□□□□□ -1.24
GAPLINC-201ENST00000578664 BCL11BQ9C0K0 894 aaPredicted RBP7.32□□□□□ -1.24
GAPLINC-201ENST00000578664 NKX1-1Q15270 411 aaPredicted RBP7.31□□□□□ -1.24
GAPLINC-201ENST00000578664 TRPC6Q9Y210 931 aa7.3□□□□□ -1.24
GAPLINC-201ENST00000578664 GALR2O43603 387 aaPredicted RBP7.29□□□□□ -1.24
GAPLINC-201ENST00000578664 P3H3Q8IVL6 736 aa7.29□□□□□ -1.24
GAPLINC-201ENST00000578664 ZMYND15Q9H091 742 aa7.29□□□□□ -1.24
GAPLINC-201ENST00000578664 STK24Q9Y6E0 443 aa7.29□□□□□ -1.24
GAPLINC-201ENST00000578664 GTPBP6O43824 516 aaPredicted RBP7.28□□□□□ -1.24
GAPLINC-201ENST00000578664 LMOD2Q6P5Q4 547 aa7.28□□□□□ -1.24
GAPLINC-201ENST00000578664 TIE1P35590 1138 aa7.27□□□□□ -1.25
GAPLINC-201ENST00000578664 RSPH6AQ9H0K4 717 aa7.26□□□□□ -1.25
GAPLINC-201ENST00000578664 GABBR2O75899 941 aa7.25□□□□□ -1.25
GAPLINC-201ENST00000578664 NEUROD2Q15784 382 aa7.24□□□□□ -1.25
GAPLINC-201ENST00000578664 TMEM106CQ9BVX2 250 aa7.24□□□□□ -1.25
GAPLINC-201ENST00000578664 BMP2KQ9NSY1 1161 aaPredicted RBP7.24□□□□□ -1.25
GAPLINC-201ENST00000578664 TTLL13PA6NNM8 815 aa7.23□□□□□ -1.25
GAPLINC-201ENST00000578664 PELP1Q8IZL8 1130 aaKnown RBP7.23□□□□□ -1.25
GAPLINC-201ENST00000578664 CABP2Q9NPB3 220 aa7.22□□□□□ -1.25
GAPLINC-201ENST00000578664 CCDC9Q9Y3X0 531 aaKnown RBP7.22□□□□□ -1.25
GAPLINC-201ENST00000578664 ASTLQ6HA08 431 aaPredicted RBP7.21□□□□□ -1.26
GAPLINC-201ENST00000578664 EFCAB3Q8N7B9 438 aa7.21□□□□□ -1.26
GAPLINC-201ENST00000578664 MFRPQ9BY79 579 aa7.21□□□□□ -1.26
GAPLINC-201ENST00000578664 SOX12O15370 315 aa7.2□□□□□ -1.26
GAPLINC-201ENST00000578664 SP7Q8TDD2 431 aaPredicted RBP7.2□□□□□ -1.26
GAPLINC-201ENST00000578664 ZBTB7CA1YPR0 619 aa7.19□□□□□ -1.26
GAPLINC-201ENST00000578664 ATMINO43313 823 aaPredicted RBP7.19□□□□□ -1.26
GAPLINC-201ENST00000578664 ILDR1Q86SU0 546 aaPredicted RBP7.19□□□□□ -1.26
GAPLINC-201ENST00000578664 FBXO22Q8NEZ5 403 aa7.19□□□□□ -1.26
GAPLINC-201ENST00000578664 RYDENQ9NUL5 291 aaKnown RBP7.19□□□□□ -1.26
GAPLINC-201ENST00000578664 TTBK1Q5TCY1 1321 aaPredicted RBP7.18□□□□□ -1.26
GAPLINC-201ENST00000578664 ATN1P54259 1190 aaPredicted RBP7.17□□□□□ -1.26
GAPLINC-201ENST00000578664 MYT1Q01538 1121 aa7.17□□□□□ -1.26
GAPLINC-201ENST00000578664 ZC3H15Q8WU90 426 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms