RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 DCAF8Q5TAQ9 597 aa12.1□□□□□ -0.47
TRAPPC8-205ENST00000578658 GSE1Q14687 1217 aa12.09□□□□□ -0.47
TRAPPC8-205ENST00000578658 SP7Q8TDD2 431 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC8-205ENST00000578658 PHF12Q96QT6 1004 aa12.07□□□□□ -0.48
TRAPPC8-205ENST00000578658 CIZ1Q9ULV3 898 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC8-205ENST00000578658 CLCN6P51797 869 aa12.01□□□□□ -0.49
TRAPPC8-205ENST00000578658 KIF12Q96FN5 646 aa12□□□□□ -0.49
TRAPPC8-205ENST00000578658 GABBR2O75899 941 aa11.99□□□□□ -0.49
TRAPPC8-205ENST00000578658 PYGBP11216 843 aa11.97□□□□□ -0.49
TRAPPC8-205ENST00000578658 CHRM1P11229 460 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC8-205ENST00000578658 MAP3K13O43283 966 aa11.95□□□□□ -0.5
TRAPPC8-205ENST00000578658 TRIM41Q8WV44 630 aa11.95□□□□□ -0.5
TRAPPC8-205ENST00000578658 PKD2Q13563 968 aa11.94□□□□□ -0.5
TRAPPC8-205ENST00000578658 SGIP1Q9BQI5 828 aa11.93□□□□□ -0.5
TRAPPC8-205ENST00000578658 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC8-205ENST00000578658 MS4A3Q96HJ5 214 aa11.92□□□□□ -0.5
TRAPPC8-205ENST00000578658 PCDHB13Q9Y5F0 798 aa11.9□□□□□ -0.5
TRAPPC8-205ENST00000578658 IFNL1Q8IU54 200 aa11.87□□□□□ -0.51
TRAPPC8-205ENST00000578658 ECM2O94769 699 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC8-205ENST00000578658 ZNF467Q7Z7K2 595 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-205ENST00000578658 PCDHB8Q9UN66 801 aa11.83□□□□□ -0.52
TRAPPC8-205ENST00000578658 AMER1Q5JTC6 1135 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC8-205ENST00000578658 RNF25Q96BH1 459 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC8-205ENST00000578658 TRPC6Q9Y210 931 aa11.81□□□□□ -0.52
TRAPPC8-205ENST00000578658 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
TRAPPC8-205ENST00000578658 RIOK3O14730 519 aaKnown RBP11.76□□□□□ -0.53
TRAPPC8-205ENST00000578658 RGL2O15211 777 aa11.76□□□□□ -0.53
TRAPPC8-205ENST00000578658 TIE1P35590 1138 aa11.76□□□□□ -0.53
TRAPPC8-205ENST00000578658 DCBLD2Q96PD2 775 aa11.76□□□□□ -0.53
TRAPPC8-205ENST00000578658 POTEIP0CG38 1075 aa11.75□□□□□ -0.53
TRAPPC8-205ENST00000578658 BMP2KQ9NSY1 1161 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC8-205ENST00000578658 ASTLQ6HA08 431 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC8-205ENST00000578658 PDAP1Q13442 181 aaKnown RBP11.72□□□□□ -0.53
TRAPPC8-205ENST00000578658 TTLL13PA6NNM8 815 aa11.71□□□□□ -0.53
TRAPPC8-205ENST00000578658 ATMINO43313 823 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC8-205ENST00000578658 PSEN1P49768 467 aa11.7□□□□□ -0.54
TRAPPC8-205ENST00000578658 TMEM106CQ9BVX2 250 aa11.7□□□□□ -0.54
TRAPPC8-205ENST00000578658 VGFO15240 615 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC8-205ENST00000578658 ATN1P54259 1190 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC8-205ENST00000578658 PELP1Q8IZL8 1130 aaKnown RBP11.65□□□□□ -0.54
TRAPPC8-205ENST00000578658 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
TRAPPC8-205ENST00000578658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC8-205ENST00000578658 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC8-205ENST00000578658 TRIM35Q9UPQ4 493 aa11.63□□□□□ -0.55
TRAPPC8-205ENST00000578658 SLC39A7Q92504 469 aa11.56□□□□□ -0.56
TRAPPC8-205ENST00000578658 BCL11BQ9C0K0 894 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC8-205ENST00000578658 STK25O00506 426 aa11.55□□□□□ -0.56
TRAPPC8-205ENST00000578658 CABP2Q9NPB3 220 aa11.55□□□□□ -0.56
TRAPPC8-205ENST00000578658 C7P10643 843 aa11.54□□□□□ -0.56
TRAPPC8-205ENST00000578658 IER5LQ5T953 404 aa11.54□□□□□ -0.56
TRAPPC8-205ENST00000578658 METRNQ9UJH8 293 aa11.53□□□□□ -0.56
TRAPPC8-205ENST00000578658 STK24Q9Y6E0 443 aa11.53□□□□□ -0.56
TRAPPC8-205ENST00000578658 GOLGA2Q08379 1002 aa11.52□□□□□ -0.57
TRAPPC8-205ENST00000578658 HS6ST3Q8IZP7 471 aa11.52□□□□□ -0.57
TRAPPC8-205ENST00000578658 DCAF8L2P0C7V8 631 aa11.51□□□□□ -0.57
TRAPPC8-205ENST00000578658 CHGAP10645 457 aaKnown RBP11.5□□□□□ -0.57
TRAPPC8-205ENST00000578658 MKRN3Q13064 507 aaKnown RBP11.5□□□□□ -0.57
TRAPPC8-205ENST00000578658 EFCAB3Q8N7B9 438 aa11.49□□□□□ -0.57
TRAPPC8-205ENST00000578658 IRX5P78411 483 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC8-205ENST00000578658 POTEFA5A3E0 1075 aa11.47□□□□□ -0.57
TRAPPC8-205ENST00000578658 COLQQ9Y215 455 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC8-205ENST00000578658 SEC24BO95487 1268 aa11.44□□□□□ -0.58
TRAPPC8-205ENST00000578658 ILDR1Q86SU0 546 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC8-205ENST00000578658 DNAJC5Q9H3Z4 198 aa11.43□□□□□ -0.58
TRAPPC8-205ENST00000578658 OCEL1Q9H607 264 aa11.43□□□□□ -0.58
TRAPPC8-205ENST00000578658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.43□□□□□ -0.587e-8■■■□□ 16.8
TRAPPC8-205ENST00000578658 SOX12O15370 315 aa11.42□□□□□ -0.58
TRAPPC8-205ENST00000578658 PLCG2P16885 1265 aa11.42□□□□□ -0.58
TRAPPC8-205ENST00000578658 PDCD7Q8N8D1 485 aaKnown RBP11.4□□□□□ -0.58
TRAPPC8-205ENST00000578658 POTEB2H3BUK9 544 aa11.38□□□□□ -0.59
TRAPPC8-205ENST00000578658 MFRPQ9BY79 579 aa11.38□□□□□ -0.59
TRAPPC8-205ENST00000578658 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
TRAPPC8-205ENST00000578658 NKX1-1Q15270 411 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC8-205ENST00000578658 FBXO22Q8NEZ5 403 aa11.36□□□□□ -0.59
TRAPPC8-205ENST00000578658 NLRP6P59044 892 aa11.35□□□□□ -0.59
TRAPPC8-205ENST00000578658 LHX8Q68G74 356 aa11.34□□□□□ -0.59
TRAPPC8-205ENST00000578658 MS4A4AQ96JQ5 239 aa11.34□□□□□ -0.59
TRAPPC8-205ENST00000578658 POTEJP0CG39 1038 aa11.32□□□□□ -0.6
TRAPPC8-205ENST00000578658 DPY19L2Q6NUT2 758 aa11.32□□□□□ -0.6
TRAPPC8-205ENST00000578658 BBXQ8WY36 941 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC8-205ENST00000578658 L3MBTL3Q96JM7 780 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC8-205ENST00000578658 RYDENQ9NUL5 291 aaKnown RBP11.25□□□□□ -0.61
TRAPPC8-205ENST00000578658 GTPBP6O43824 516 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC8-205ENST00000578658 BOLA1Q9Y3E2 137 aa11.24□□□□□ -0.61
TRAPPC8-205ENST00000578658 MAMSTRQ6ZN01 415 aa11.23□□□□□ -0.61
TRAPPC8-205ENST00000578658 OTUD5Q96G74 571 aa11.22□□□□□ -0.61
TRAPPC8-205ENST00000578658 TMEM121BQ9BXQ6 578 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC8-205ENST00000578658 PPP1R37O75864 691 aa11.21□□□□□ -0.61
TRAPPC8-205ENST00000578658 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC8-205ENST00000578658 G3V3G9 751 aa11.19□□□□□ -0.62
TRAPPC8-205ENST00000578658 MICALL2Q8IY33 904 aa11.19□□□□□ -0.62
TRAPPC8-205ENST00000578658 SCUBE2Q9NQ36 999 aa11.19□□□□□ -0.62
TRAPPC8-205ENST00000578658 C3orf67Q6ZVT6 689 aa11.16□□□□□ -0.62
TRAPPC8-205ENST00000578658 SPRYD3Q8NCJ5 442 aa11.14□□□□□ -0.63
TRAPPC8-205ENST00000578658 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.14□□□□□ -0.63
TRAPPC8-205ENST00000578658 PAXIP1Q6ZW49 1069 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC8-205ENST00000578658 SLAIN1Q8ND83 568 aa11.08□□□□□ -0.64
TRAPPC8-205ENST00000578658 CFAP44Q96MT7 982 aa11.08□□□□□ -0.64
TRAPPC8-205ENST00000578658 TMEM92Q6UXU6 159 aa11.06□□□□□ -0.64
TRAPPC8-205ENST00000578658 KIF3CO14782 793 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms