RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 ECM2O94769 699 aaPredicted RBP12.5□□□□□ -0.41
PTPRM-207ENST00000578571 CCDC61Q9Y6R9 512 aa12.49□□□□□ -0.41
PTPRM-207ENST00000578571 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
PTPRM-207ENST00000578571 PAK3O75914 559 aaPredicted RBP12.47□□□□□ -0.41
PTPRM-207ENST00000578571 ZRANB1Q9UGI0 708 aa12.46□□□□□ -0.41
PTPRM-207ENST00000578571 PYGBP11216 843 aa12.44□□□□□ -0.42
PTPRM-207ENST00000578571 CHRM1P11229 460 aaPredicted RBP12.44□□□□□ -0.42
PTPRM-207ENST00000578571 HAX1O00165 279 aa12.43□□□□□ -0.42
PTPRM-207ENST00000578571 RGL2O15211 777 aa12.42□□□□□ -0.42
PTPRM-207ENST00000578571 EVX2Q03828 476 aa12.42□□□□□ -0.42
PTPRM-207ENST00000578571 RNF25Q96BH1 459 aaPredicted RBP12.39□□□□□ -0.43
PTPRM-207ENST00000578571 ZNF579Q8NAF0 562 aaKnown RBP12.38□□□□□ -0.43
PTPRM-207ENST00000578571 PHF12Q96QT6 1004 aa12.38□□□□□ -0.43
PTPRM-207ENST00000578571 KIF12Q96FN5 646 aa12.35□□□□□ -0.43
PTPRM-207ENST00000578571 MAP3K13O43283 966 aa12.32□□□□□ -0.44
PTPRM-207ENST00000578571 RIOK3O14730 519 aaKnown RBP12.31□□□□□ -0.44
PTPRM-207ENST00000578571 SGIP1Q9BQI5 828 aa12.28□□□□□ -0.44
PTPRM-207ENST00000578571 PCDHB13Q9Y5F0 798 aa12.28□□□□□ -0.44
PTPRM-207ENST00000578571 DCAF8L2P0C7V8 631 aa12.27□□□□□ -0.45
PTPRM-207ENST00000578571 PCDHB8Q9UN66 801 aa12.27□□□□□ -0.45
PTPRM-207ENST00000578571 IFNL1Q8IU54 200 aa12.26□□□□□ -0.45
PTPRM-207ENST00000578571 ZNF467Q7Z7K2 595 aaPredicted RBP12.25□□□□□ -0.45
PTPRM-207ENST00000578571 MS4A3Q96HJ5 214 aa12.23□□□□□ -0.45
PTPRM-207ENST00000578571 VGFO15240 615 aaPredicted RBP12.21□□□□□ -0.45
PTPRM-207ENST00000578571 GALR2O43603 387 aaPredicted RBP12.18□□□□□ -0.46
PTPRM-207ENST00000578571 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.17□□□□□ -0.46
PTPRM-207ENST00000578571 CLCN6P51797 869 aa12.17□□□□□ -0.46
PTPRM-207ENST00000578571 ZFP91Q96JP5 570 aaPredicted RBP12.17□□□□□ -0.46
PTPRM-207ENST00000578571 TAOK2Q9UL54 1235 aa12.17□□□□□ -0.46
PTPRM-207ENST00000578571 TRPC6Q9Y210 931 aa12.17□□□□□ -0.46
PTPRM-207ENST00000578571 PDAP1Q13442 181 aaKnown RBP12.16□□□□□ -0.46
PTPRM-207ENST00000578571 CHGAP10645 457 aaKnown RBP12.15□□□□□ -0.46
PTPRM-207ENST00000578571 HS6ST3Q8IZP7 471 aa12.15□□□□□ -0.46
PTPRM-207ENST00000578571 GABBR2O75899 941 aa12.14□□□□□ -0.47
PTPRM-207ENST00000578571 PSEN1P49768 467 aa12.14□□□□□ -0.47
PTPRM-207ENST00000578571 STK25O00506 426 aa12.11□□□□□ -0.47
PTPRM-207ENST00000578571 SP7Q8TDD2 431 aaPredicted RBP12.11□□□□□ -0.47
PTPRM-207ENST00000578571 BCL11BQ9C0K0 894 aaPredicted RBP12.1□□□□□ -0.47
PTPRM-207ENST00000578571 STK24Q9Y6E0 443 aa12.07□□□□□ -0.48
PTPRM-207ENST00000578571 TIE1P35590 1138 aa12.06□□□□□ -0.48
PTPRM-207ENST00000578571 DNAJC5Q9H3Z4 198 aa12.06□□□□□ -0.48
PTPRM-207ENST00000578571 TMEM106CQ9BVX2 250 aa12.05□□□□□ -0.48
PTPRM-207ENST00000578571 BMP2KQ9NSY1 1161 aaPredicted RBP12.05□□□□□ -0.48
PTPRM-207ENST00000578571 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
PTPRM-207ENST00000578571 TTLL13PA6NNM8 815 aa12.03□□□□□ -0.48
PTPRM-207ENST00000578571 NKX1-1Q15270 411 aaPredicted RBP12□□□□□ -0.49
PTPRM-207ENST00000578571 CABP2Q9NPB3 220 aa11.99□□□□□ -0.49
PTPRM-207ENST00000578571 ATMINO43313 823 aaPredicted RBP11.98□□□□□ -0.49
PTPRM-207ENST00000578571 ASTLQ6HA08 431 aaPredicted RBP11.98□□□□□ -0.49
PTPRM-207ENST00000578571 ATN1P54259 1190 aaPredicted RBP11.96□□□□□ -0.49
PTPRM-207ENST00000578571 EFCAB3Q8N7B9 438 aa11.94□□□□□ -0.5
PTPRM-207ENST00000578571 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
PTPRM-207ENST00000578571 POTEIP0CG38 1075 aa11.93□□□□□ -0.5
PTPRM-207ENST00000578571 DCBLD2Q96PD2 775 aa11.93□□□□□ -0.5
PTPRM-207ENST00000578571 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.93□□□□□ -0.5
PTPRM-207ENST00000578571 PELP1Q8IZL8 1130 aaKnown RBP11.9□□□□□ -0.5
PTPRM-207ENST00000578571 PLCB2Q00722 1185 aa11.89□□□□□ -0.51
PTPRM-207ENST00000578571 MFRPQ9BY79 579 aa11.89□□□□□ -0.51
PTPRM-207ENST00000578571 GTPBP6O43824 516 aaPredicted RBP11.88□□□□□ -0.51
PTPRM-207ENST00000578571 GOLGA2Q08379 1002 aa11.88□□□□□ -0.51
PTPRM-207ENST00000578571 PAXIP1Q6ZW49 1069 aaPredicted RBP11.88□□□□□ -0.51
PTPRM-207ENST00000578571 SOX12O15370 315 aa11.87□□□□□ -0.51
PTPRM-207ENST00000578571 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
PTPRM-207ENST00000578571 PHF8Q9UPP1 1060 aa11.86□□□□□ -0.51
PTPRM-207ENST00000578571 SPRYD3Q8NCJ5 442 aa11.85□□□□□ -0.51
PTPRM-207ENST00000578571 FBXO22Q8NEZ5 403 aa11.85□□□□□ -0.51
PTPRM-207ENST00000578571 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
PTPRM-207ENST00000578571 ILDR1Q86SU0 546 aaPredicted RBP11.83□□□□□ -0.52
PTPRM-207ENST00000578571 IER5LQ5T953 404 aa11.82□□□□□ -0.52
PTPRM-207ENST00000578571 NLRP6P59044 892 aa11.81□□□□□ -0.52
PTPRM-207ENST00000578571 MS4A4AQ96JQ5 239 aa11.81□□□□□ -0.52
PTPRM-207ENST00000578571 IRX5P78411 483 aaPredicted RBP11.79□□□□□ -0.52
PTPRM-207ENST00000578571 RYDENQ9NUL5 291 aaKnown RBP11.79□□□□□ -0.52
PTPRM-207ENST00000578571 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.79□□□□□ -0.529e-8■■□□□ 14.2
PTPRM-207ENST00000578571 SLC39A7Q92504 469 aa11.77□□□□□ -0.53
PTPRM-207ENST00000578571 PDCD7Q8N8D1 485 aaKnown RBP11.76□□□□□ -0.53
PTPRM-207ENST00000578571 POTEFA5A3E0 1075 aa11.74□□□□□ -0.53
PTPRM-207ENST00000578571 PPP1R37O75864 691 aa11.74□□□□□ -0.53
PTPRM-207ENST00000578571 C7P10643 843 aa11.74□□□□□ -0.53
PTPRM-207ENST00000578571 OCEL1Q9H607 264 aa11.74□□□□□ -0.53
PTPRM-207ENST00000578571 METRNQ9UJH8 293 aa11.74□□□□□ -0.53
PTPRM-207ENST00000578571 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
PTPRM-207ENST00000578571 DPY19L2Q6NUT2 758 aa11.71□□□□□ -0.53
PTPRM-207ENST00000578571 SEC24BO95487 1268 aa11.69□□□□□ -0.54
PTPRM-207ENST00000578571 PLCG2P16885 1265 aa11.69□□□□□ -0.54
PTPRM-207ENST00000578571 HAP1P54257 671 aaPredicted RBP11.69□□□□□ -0.54
PTPRM-207ENST00000578571 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
PTPRM-207ENST00000578571 SLC24A1O60721 1099 aa11.67□□□□□ -0.54
PTPRM-207ENST00000578571 CADPS2Q86UW7 1296 aa11.6□□□□□ -0.55
PTPRM-207ENST00000578571 MICALL2Q8IY33 904 aa11.59□□□□□ -0.55
PTPRM-207ENST00000578571 BOLA1Q9Y3E2 137 aa11.59□□□□□ -0.55
PTPRM-207ENST00000578571 TMEM121BQ9BXQ6 578 aaPredicted RBP11.58□□□□□ -0.56
PTPRM-207ENST00000578571 L3MBTL3Q96JM7 780 aaPredicted RBP11.57□□□□□ -0.56
PTPRM-207ENST00000578571 POTEB2H3BUK9 544 aa11.55□□□□□ -0.56
PTPRM-207ENST00000578571 POTEJP0CG39 1038 aa11.53□□□□□ -0.56
PTPRM-207ENST00000578571 KDM2AQ9Y2K7 1162 aa11.53□□□□□ -0.56
PTPRM-207ENST00000578571 G3V3G9 751 aa11.51□□□□□ -0.57
PTPRM-207ENST00000578571 VSIG10Q8N0Z9 540 aa11.51□□□□□ -0.57
PTPRM-207ENST00000578571 NCKAP5LQ9HCH0 1330 aa11.49□□□□□ -0.57
PTPRM-207ENST00000578571 NISCHQ9Y2I1 1504 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms