RNA–Protein interactions for RNA: ENST00000578137.5

DDX42-206, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 857 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-206ENST00000578137 ASTLQ6HA08 431 aaPredicted RBP13.42□□□□□ -0.26
DDX42-206ENST00000578137 PROM2Q8N271 834 aa13.39□□□□□ -0.27
DDX42-206ENST00000578137 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
DDX42-206ENST00000578137 ATMINO43313 823 aaPredicted RBP13.38□□□□□ -0.27
DDX42-206ENST00000578137 SLC39A7Q92504 469 aa13.35□□□□□ -0.27
DDX42-206ENST00000578137 C7P10643 843 aa13.34□□□□□ -0.27
DDX42-206ENST00000578137 LCE2DQ5TA82 110 aaPredicted RBP13.32□□□□□ -0.28
DDX42-206ENST00000578137 MAMSTRQ6ZN01 415 aa13.27□□□□□ -0.29
DDX42-206ENST00000578137 PCDH10Q9P2E7 1040 aa13.27□□□□□ -0.29
DDX42-206ENST00000578137 CCDC61Q9Y6R9 512 aa13.27□□□□□ -0.29
DDX42-206ENST00000578137 ATN1P54259 1190 aaPredicted RBP13.25□□□□□ -0.29
DDX42-206ENST00000578137 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
DDX42-206ENST00000578137 FAM163AQ96GL9 167 aaPredicted RBP13.22□□□□□ -0.29
DDX42-206ENST00000578137 KIF12Q96FN5 646 aa13.2□□□□□ -0.3
DDX42-206ENST00000578137 SCUBE2Q9NQ36 999 aa13.2□□□□□ -0.3
DDX42-206ENST00000578137 POTEFA5A3E0 1075 aa13.19□□□□□ -0.3
DDX42-206ENST00000578137 TRPC6Q9Y210 931 aa13.17□□□□□ -0.3
DDX42-206ENST00000578137 BMP2KQ9NSY1 1161 aaPredicted RBP13.16□□□□□ -0.3
DDX42-206ENST00000578137 TIE1P35590 1138 aa13.13□□□□□ -0.31
DDX42-206ENST00000578137 PLEKHG5O94827 1062 aa13.12□□□□□ -0.31
DDX42-206ENST00000578137 MAP3K13O43283 966 aa13.07□□□□□ -0.32
DDX42-206ENST00000578137 RASEFQ8IZ41 740 aa13.04□□□□□ -0.32
DDX42-206ENST00000578137 MIER1Q8N108 512 aa13.04□□□□□ -0.32
DDX42-206ENST00000578137 SGIP1Q9BQI5 828 aa13.03□□□□□ -0.32
DDX42-206ENST00000578137 COLQQ9Y215 455 aaPredicted RBP13.03□□□□□ -0.32
DDX42-206ENST00000578137 TTLL13PA6NNM8 815 aa12.99□□□□□ -0.33
DDX42-206ENST00000578137 IER5LQ5T953 404 aa12.98□□□□□ -0.33
DDX42-206ENST00000578137 SEC24BO95487 1268 aa12.97□□□□□ -0.33
DDX42-206ENST00000578137 CDAN1Q8IWY9 1227 aa12.97□□□□□ -0.33
DDX42-206ENST00000578137 ZBTB47Q9UFB7 747 aaPredicted RBP12.93□□□□□ -0.34
DDX42-206ENST00000578137 TRIM35Q9UPQ4 493 aa12.91□□□□□ -0.34
DDX42-206ENST00000578137 PLCD3Q8N3E9 789 aa12.89□□□□□ -0.35
DDX42-206ENST00000578137 PCDHB13Q9Y5F0 798 aa12.89□□□□□ -0.35
DDX42-206ENST00000578137 NUBP1P53384 320 aa12.88□□□□□ -0.35
DDX42-206ENST00000578137 ST18O60284 1047 aa12.84□□□□□ -0.35
DDX42-206ENST00000578137 SLAIN1Q8ND83 568 aa12.84□□□□□ -0.35
DDX42-206ENST00000578137 IFNL1Q8IU54 200 aa12.81□□□□□ -0.36
DDX42-206ENST00000578137 FAM212AQ96EL1 285 aa12.79□□□□□ -0.36
DDX42-206ENST00000578137 TMEM106CQ9BVX2 250 aa12.75□□□□□ -0.37
DDX42-206ENST00000578137 PLCG2P16885 1265 aa12.73□□□□□ -0.37
DDX42-206ENST00000578137 IRX5P78411 483 aaPredicted RBP12.73□□□□□ -0.37
DDX42-206ENST00000578137 MMRN1Q13201 1228 aa12.69□□□□□ -0.38
DDX42-206ENST00000578137 SPNS2Q8IVW8 549 aa12.67□□□□□ -0.38
DDX42-206ENST00000578137 OCEL1Q9H607 264 aa12.65□□□□□ -0.38
DDX42-206ENST00000578137 TMEM121BQ9BXQ6 578 aaPredicted RBP12.64□□□□□ -0.39
DDX42-206ENST00000578137 MARVELD3Q96A59 401 aa12.61□□□□□ -0.39
DDX42-206ENST00000578137 SNPHO15079 494 aa12.59□□□□□ -0.39
DDX42-206ENST00000578137 DCAF8Q5TAQ9 597 aa12.57□□□□□ -0.4
DDX42-206ENST00000578137 PYGBP11216 843 aa12.56□□□□□ -0.4
DDX42-206ENST00000578137 FKBP8Q14318 412 aa12.56□□□□□ -0.4
DDX42-206ENST00000578137 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.55□□□□□ -0.4
DDX42-206ENST00000578137 FBXO3Q9UK99 471 aa12.53□□□□□ -0.4
DDX42-206ENST00000578137 PCDHB8Q9UN66 801 aa12.51□□□□□ -0.41
DDX42-206ENST00000578137 ZNF467Q7Z7K2 595 aaPredicted RBP12.48□□□□□ -0.41
DDX42-206ENST00000578137 PDCD7Q8N8D1 485 aaKnown RBP12.48□□□□□ -0.41
DDX42-206ENST00000578137 GSE1Q14687 1217 aa12.45□□□□□ -0.42
DDX42-206ENST00000578137 CHRM1P11229 460 aaPredicted RBP12.44□□□□□ -0.42
DDX42-206ENST00000578137 EMP3P54852 163 aa12.44□□□□□ -0.42
DDX42-206ENST00000578137 L3MBTL3Q96JM7 780 aaPredicted RBP12.43□□□□□ -0.42
DDX42-206ENST00000578137 POTEB3A0JP26 581 aa12.42□□□□□ -0.42
DDX42-206ENST00000578137 POTEBQ6S5H4 581 aa12.42□□□□□ -0.42
DDX42-206ENST00000578137 KRTAP3-3Q9BYR6 98 aa12.41□□□□□ -0.42
DDX42-206ENST00000578137 KRTAP3-2Q9BYR7 98 aa12.41□□□□□ -0.42
DDX42-206ENST00000578137 MKRN3Q13064 507 aaKnown RBP12.4□□□□□ -0.42
DDX42-206ENST00000578137 C3orf67Q6ZVT6 689 aa12.4□□□□□ -0.42
DDX42-206ENST00000578137 GOLGA2Q08379 1002 aa12.38□□□□□ -0.43
DDX42-206ENST00000578137 ILDR1Q86SU0 546 aaPredicted RBP12.38□□□□□ -0.43
DDX42-206ENST00000578137 HS3ST6Q96QI5 342 aa12.38□□□□□ -0.43
DDX42-206ENST00000578137 FAM205CA6NFA0 338 aa12.36□□□□□ -0.43
DDX42-206ENST00000578137 VASPP50552 380 aaPredicted RBP12.34□□□□□ -0.43
DDX42-206ENST00000578137 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.33□□□□□ -0.449e-10■□□□□ 10.5
DDX42-206ENST00000578137 PSEN1P49768 467 aa12.31□□□□□ -0.44
DDX42-206ENST00000578137 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
DDX42-206ENST00000578137 PDAP1Q13442 181 aaKnown RBP12.26□□□□□ -0.45
DDX42-206ENST00000578137 DPY19L2Q6NUT2 758 aa12.21□□□□□ -0.45
DDX42-206ENST00000578137 HOXB3P14651 431 aaPredicted RBP12.18□□□□□ -0.46
DDX42-206ENST00000578137 BOLA1Q9Y3E2 137 aa12.18□□□□□ -0.46
DDX42-206ENST00000578137 CABP2Q9NPB3 220 aa12.15□□□□□ -0.46
DDX42-206ENST00000578137 G3V3G9 751 aa12.14□□□□□ -0.47
DDX42-206ENST00000578137 HOXB1P14653 301 aaPredicted RBP12.13□□□□□ -0.47
DDX42-206ENST00000578137 SPOCK2Q92563 424 aa12.13□□□□□ -0.47
DDX42-206ENST00000578137 DOK7Q18PE1 504 aa12.09□□□□□ -0.47
DDX42-206ENST00000578137 RNF166Q96A37 237 aaPredicted RBP12.09□□□□□ -0.47
DDX42-206ENST00000578137 ZNF710Q8N1W2 664 aa12.08□□□□□ -0.48
DDX42-206ENST00000578137 IFNLR1Q8IU57 520 aaPredicted RBP12.07□□□□□ -0.48
DDX42-206ENST00000578137 ERBB3P21860 1342 aa12.07□□□□□ -0.48
DDX42-206ENST00000578137 CIZ1Q9ULV3 898 aaPredicted RBP12.05□□□□□ -0.48
DDX42-206ENST00000578137 TRIM41Q8WV44 630 aa12.04□□□□□ -0.48
DDX42-206ENST00000578137 RIMBP2O15034 1052 aa12.01□□□□□ -0.49
DDX42-206ENST00000578137 VARS2Q5ST30 1063 aaKnown RBP12.01□□□□□ -0.49
DDX42-206ENST00000578137 ZSWIM6Q9HCJ5 1215 aa12.01□□□□□ -0.49
DDX42-206ENST00000578137 MYT1LQ9UL68 1186 aa11.98□□□□□ -0.49
DDX42-206ENST00000578137 EFCAB3Q8N7B9 438 aa11.97□□□□□ -0.49
DDX42-206ENST00000578137 MICALL2Q8IY33 904 aa11.93□□□□□ -0.5
DDX42-206ENST00000578137 SOX12O15370 315 aa11.91□□□□□ -0.5
DDX42-206ENST00000578137 TMEM92Q6UXU6 159 aa11.91□□□□□ -0.5
DDX42-206ENST00000578137 ZNF687Q8N1G0 1237 aa11.91□□□□□ -0.5
DDX42-206ENST00000578137 GPR153Q6NV75 609 aa11.89□□□□□ -0.51
DDX42-206ENST00000578137 PTGER2P43116 358 aa11.88□□□□□ -0.51
DDX42-206ENST00000578137 MS4A4AQ96JQ5 239 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms