RNA–Protein interactions for RNA: ENST00000578040.1

AC003687.1-201, humanhuman

TSL 3 BASIC

Gene AC003687.1, Length 427 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003687.1-201ENST00000578040 PAK3O75914 559 aaPredicted RBP7.86□□□□□ -1.15
AC003687.1-201ENST00000578040 C7P10643 843 aa7.86□□□□□ -1.15
AC003687.1-201ENST00000578040 FKBP8Q14318 412 aa7.86□□□□□ -1.15
AC003687.1-201ENST00000578040 FAM163AQ96GL9 167 aaPredicted RBP7.83□□□□□ -1.16
AC003687.1-201ENST00000578040 ATMINO43313 823 aaPredicted RBP7.82□□□□□ -1.16
AC003687.1-201ENST00000578040 SCUBE2Q9NQ36 999 aa7.81□□□□□ -1.16
AC003687.1-201ENST00000578040 SPDYE4A6NLX3 237 aa7.8□□□□□ -1.16
AC003687.1-201ENST00000578040 MS4A3Q96HJ5 214 aa7.78□□□□□ -1.16
AC003687.1-201ENST00000578040 CDAN1Q8IWY9 1227 aa7.77□□□□□ -1.17
AC003687.1-201ENST00000578040 STAG3Q9UJ98 1225 aa7.77□□□□□ -1.17
AC003687.1-201ENST00000578040 MNX1P50219 401 aaPredicted RBP7.73□□□□□ -1.17
AC003687.1-201ENST00000578040 NPM1P06748 294 aaKnown RBP eCLIP7.72□□□□□ -1.17
AC003687.1-201ENST00000578040 POTEFA5A3E0 1075 aa7.71□□□□□ -1.18
AC003687.1-201ENST00000578040 ATN1P54259 1190 aaPredicted RBP7.7□□□□□ -1.18
AC003687.1-201ENST00000578040 PROM2Q8N271 834 aa7.68□□□□□ -1.18
AC003687.1-201ENST00000578040 MMRN1Q13201 1228 aa7.65□□□□□ -1.18
AC003687.1-201ENST00000578040 BMP2KQ9NSY1 1161 aaPredicted RBP7.62□□□□□ -1.19
AC003687.1-201ENST00000578040 ST18O60284 1047 aa7.6□□□□□ -1.19
AC003687.1-201ENST00000578040 CCDC61Q9Y6R9 512 aa7.6□□□□□ -1.19
AC003687.1-201ENST00000578040 SPNS2Q8IVW8 549 aa7.59□□□□□ -1.19
AC003687.1-201ENST00000578040 FBXO3Q9UK99 471 aa7.58□□□□□ -1.2
AC003687.1-201ENST00000578040 TIE1P35590 1138 aa7.57□□□□□ -1.2
AC003687.1-201ENST00000578040 KIF12Q96FN5 646 aa7.57□□□□□ -1.2
AC003687.1-201ENST00000578040 COLQQ9Y215 455 aaPredicted RBP7.57□□□□□ -1.2
AC003687.1-201ENST00000578040 TRPC6Q9Y210 931 aa7.56□□□□□ -1.2
AC003687.1-201ENST00000578040 TSPYL2Q9H2G4 693 aaPredicted RBP7.54□□□□□ -1.2
AC003687.1-201ENST00000578040 SEC24BO95487 1268 aa7.53□□□□□ -1.2
AC003687.1-201ENST00000578040 TTLL13PA6NNM8 815 aa7.51□□□□□ -1.21
AC003687.1-201ENST00000578040 IER5LQ5T953 404 aa7.51□□□□□ -1.21
AC003687.1-201ENST00000578040 SLAIN1Q8ND83 568 aa7.51□□□□□ -1.21
AC003687.1-201ENST00000578040 TMEM121BQ9BXQ6 578 aaPredicted RBP7.51□□□□□ -1.21
AC003687.1-201ENST00000578040 MAP3K13O43283 966 aa7.48□□□□□ -1.21
AC003687.1-201ENST00000578040 VASPP50552 380 aaPredicted RBP7.46□□□□□ -1.22
AC003687.1-201ENST00000578040 TRIM35Q9UPQ4 493 aa7.45□□□□□ -1.22
AC003687.1-201ENST00000578040 PLCD3Q8N3E9 789 aa7.4□□□□□ -1.22
AC003687.1-201ENST00000578040 MIER1Q8N108 512 aa7.39□□□□□ -1.23
AC003687.1-201ENST00000578040 SNPHO15079 494 aa7.38□□□□□ -1.23
AC003687.1-201ENST00000578040 MARVELD3Q96A59 401 aa7.38□□□□□ -1.23
AC003687.1-201ENST00000578040 SGIP1Q9BQI5 828 aa7.38□□□□□ -1.23
AC003687.1-201ENST00000578040 PLEKHG5O94827 1062 aa7.37□□□□□ -1.23
AC003687.1-201ENST00000578040 IFNLR1Q8IU57 520 aaPredicted RBP7.36□□□□□ -1.23
AC003687.1-201ENST00000578040 RASEFQ8IZ41 740 aa7.36□□□□□ -1.23
AC003687.1-201ENST00000578040 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
AC003687.1-201ENST00000578040 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
AC003687.1-201ENST00000578040 PLCG2P16885 1265 aa7.35□□□□□ -1.23
AC003687.1-201ENST00000578040 IRX5P78411 483 aaPredicted RBP7.34□□□□□ -1.23
AC003687.1-201ENST00000578040 KLHL34Q8N239 644 aa7.33□□□□□ -1.24
AC003687.1-201ENST00000578040 ZBTB47Q9UFB7 747 aaPredicted RBP7.32□□□□□ -1.24
AC003687.1-201ENST00000578040 PCDHB13Q9Y5F0 798 aa7.32□□□□□ -1.24
AC003687.1-201ENST00000578040 EMP3P54852 163 aa7.3□□□□□ -1.24
AC003687.1-201ENST00000578040 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.29□□□□□ -1.24
AC003687.1-201ENST00000578040 POTEB3A0JP26 581 aa7.28□□□□□ -1.24
AC003687.1-201ENST00000578040 POTEBQ6S5H4 581 aa7.28□□□□□ -1.24
AC003687.1-201ENST00000578040 IFNL1Q8IU54 200 aa7.28□□□□□ -1.24
AC003687.1-201ENST00000578040 SPOCK2Q92563 424 aa7.28□□□□□ -1.24
AC003687.1-201ENST00000578040 HS3ST6Q96QI5 342 aa7.28□□□□□ -1.24
AC003687.1-201ENST00000578040 TMEM106CQ9BVX2 250 aa7.28□□□□□ -1.24
AC003687.1-201ENST00000578040 AMER1Q5JTC6 1135 aaPredicted RBP7.27□□□□□ -1.25
AC003687.1-201ENST00000578040 OCEL1Q9H607 264 aa7.27□□□□□ -1.25
AC003687.1-201ENST00000578040 RTN4Q9NQC3 1192 aaKnown RBP7.23□□□□□ -1.25
AC003687.1-201ENST00000578040 FAM205CA6NFA0 338 aa7.22□□□□□ -1.25
AC003687.1-201ENST00000578040 NUBP1P53384 320 aa7.19□□□□□ -1.26
AC003687.1-201ENST00000578040 RNF166Q96A37 237 aaPredicted RBP7.17□□□□□ -1.26
AC003687.1-201ENST00000578040 C3orf67Q6ZVT6 689 aa7.16□□□□□ -1.26
AC003687.1-201ENST00000578040 PDCD7Q8N8D1 485 aaKnown RBP7.15□□□□□ -1.26
AC003687.1-201ENST00000578040 FAM212AQ96EL1 285 aa7.15□□□□□ -1.26
AC003687.1-201ENST00000578040 CIZ1Q9ULV3 898 aaPredicted RBP7.15□□□□□ -1.26
AC003687.1-201ENST00000578040 PKD2Q13563 968 aa7.14□□□□□ -1.27
AC003687.1-201ENST00000578040 GSE1Q14687 1217 aa7.14□□□□□ -1.27
AC003687.1-201ENST00000578040 DCAF8Q5TAQ9 597 aa7.13□□□□□ -1.27
AC003687.1-201ENST00000578040 L3MBTL3Q96JM7 780 aaPredicted RBP7.1□□□□□ -1.27
AC003687.1-201ENST00000578040 ECM2O94769 699 aaPredicted RBP7.09□□□□□ -1.27
AC003687.1-201ENST00000578040 TRIM41Q8WV44 630 aa7.09□□□□□ -1.27
AC003687.1-201ENST00000578040 MYT1LQ9UL68 1186 aa7.08□□□□□ -1.28
AC003687.1-201ENST00000578040 HOXB3P14651 431 aaPredicted RBP7.06□□□□□ -1.28
AC003687.1-201ENST00000578040 HOXB1P14653 301 aaPredicted RBP7.06□□□□□ -1.28
AC003687.1-201ENST00000578040 PYGBP11216 843 aa7.03□□□□□ -1.28
AC003687.1-201ENST00000578040 CHRM1P11229 460 aaPredicted RBP7.03□□□□□ -1.28
AC003687.1-201ENST00000578040 ERBB3P21860 1342 aa7.01□□□□□ -1.29
AC003687.1-201ENST00000578040 RGL2O15211 777 aa7.01□□□□□ -1.29
AC003687.1-201ENST00000578040 PTGER2P43116 358 aa7.01□□□□□ -1.29
AC003687.1-201ENST00000578040 ILDR1Q86SU0 546 aaPredicted RBP7.01□□□□□ -1.29
AC003687.1-201ENST00000578040 PCDHB8Q9UN66 801 aa7.01□□□□□ -1.29
AC003687.1-201ENST00000578040 DCAF8L2P0C7V8 631 aa7□□□□□ -1.29
AC003687.1-201ENST00000578040 MKRN3Q13064 507 aaKnown RBP7□□□□□ -1.29
AC003687.1-201ENST00000578040 ZNF710Q8N1W2 664 aa6.98□□□□□ -1.29
AC003687.1-201ENST00000578040 RNF25Q96BH1 459 aaPredicted RBP6.98□□□□□ -1.29
AC003687.1-201ENST00000578040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.98□□□□□ -1.29
AC003687.1-201ENST00000578040 RIOK3O14730 519 aaKnown RBP6.97□□□□□ -1.29
AC003687.1-201ENST00000578040 GOLGA2Q08379 1002 aa6.97□□□□□ -1.29
AC003687.1-201ENST00000578040 VARS2Q5ST30 1063 aaKnown RBP6.97□□□□□ -1.29
AC003687.1-201ENST00000578040 DOK7Q18PE1 504 aa6.96□□□□□ -1.3
AC003687.1-201ENST00000578040 ZNF687Q8N1G0 1237 aa6.96□□□□□ -1.3
AC003687.1-201ENST00000578040 ZNF467Q7Z7K2 595 aaPredicted RBP6.95□□□□□ -1.3
AC003687.1-201ENST00000578040 TAOK2Q9UL54 1235 aa6.94□□□□□ -1.3
AC003687.1-201ENST00000578040 VGFO15240 615 aaPredicted RBP6.92□□□□□ -1.3
AC003687.1-201ENST00000578040 RIMBP2O15034 1052 aa6.91□□□□□ -1.3
AC003687.1-201ENST00000578040 DPY19L2Q6NUT2 758 aa6.91□□□□□ -1.3
AC003687.1-201ENST00000578040 BOLA1Q9Y3E2 137 aa6.91□□□□□ -1.3
AC003687.1-201ENST00000578040 CHGAP10645 457 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms