RNA–Protein interactions for RNA: ENST00000577906.1

SNRPD1-202, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 2

Gene SNRPD1, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-202ENST00000577906 CLCN6P51797 869 aa17.9■□□□□ 0.46
SNRPD1-202ENST00000577906 DCAF8Q5TAQ9 597 aa17.9■□□□□ 0.46
SNRPD1-202ENST00000577906 CCDC61Q9Y6R9 512 aa17.87■□□□□ 0.45
SNRPD1-202ENST00000577906 GSE1Q14687 1217 aa17.85■□□□□ 0.45
SNRPD1-202ENST00000577906 PHF12Q96QT6 1004 aa17.83■□□□□ 0.44
SNRPD1-202ENST00000577906 GABBR2O75899 941 aa17.81■□□□□ 0.44
SNRPD1-202ENST00000577906 CIZ1Q9ULV3 898 aaPredicted RBP17.76■□□□□ 0.43
SNRPD1-202ENST00000577906 KIF12Q96FN5 646 aa17.72■□□□□ 0.43
SNRPD1-202ENST00000577906 MAP3K13O43283 966 aa17.65■□□□□ 0.42
SNRPD1-202ENST00000577906 PYGBP11216 843 aa17.65■□□□□ 0.42
SNRPD1-202ENST00000577906 SGIP1Q9BQI5 828 aa17.64■□□□□ 0.41
SNRPD1-202ENST00000577906 GALR2O43603 387 aaPredicted RBP17.63■□□□□ 0.41
SNRPD1-202ENST00000577906 CHRM1P11229 460 aaPredicted RBP17.62■□□□□ 0.41
SNRPD1-202ENST00000577906 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
SNRPD1-202ENST00000577906 MS4A3Q96HJ5 214 aa17.62■□□□□ 0.41
SNRPD1-202ENST00000577906 PCDHB13Q9Y5F0 798 aa17.6■□□□□ 0.41
SNRPD1-202ENST00000577906 DCBLD2Q96PD2 775 aa17.54■□□□□ 0.4
SNRPD1-202ENST00000577906 IFNL1Q8IU54 200 aa17.49■□□□□ 0.39
SNRPD1-202ENST00000577906 ZNF467Q7Z7K2 595 aaPredicted RBP17.48■□□□□ 0.39
SNRPD1-202ENST00000577906 PCDHB8Q9UN66 801 aa17.43■□□□□ 0.38
SNRPD1-202ENST00000577906 TIE1P35590 1138 aa17.41■□□□□ 0.38
SNRPD1-202ENST00000577906 PKD2Q13563 968 aa17.41■□□□□ 0.38
SNRPD1-202ENST00000577906 ECM2O94769 699 aaPredicted RBP17.4■□□□□ 0.38
SNRPD1-202ENST00000577906 POTEIP0CG38 1075 aa17.39■□□□□ 0.37
SNRPD1-202ENST00000577906 TRPC6Q9Y210 931 aa17.39■□□□□ 0.37
SNRPD1-202ENST00000577906 ASTLQ6HA08 431 aaPredicted RBP17.36■□□□□ 0.37
SNRPD1-202ENST00000577906 BMP2KQ9NSY1 1161 aaPredicted RBP17.34■□□□□ 0.37
SNRPD1-202ENST00000577906 ATMINO43313 823 aaPredicted RBP17.33■□□□□ 0.36
SNRPD1-202ENST00000577906 RIOK3O14730 519 aaKnown RBP17.3■□□□□ 0.36
SNRPD1-202ENST00000577906 TMEM106CQ9BVX2 250 aa17.3■□□□□ 0.36
SNRPD1-202ENST00000577906 TTLL13PA6NNM8 815 aa17.29■□□□□ 0.36
SNRPD1-202ENST00000577906 PDAP1Q13442 181 aaKnown RBP17.29■□□□□ 0.36
SNRPD1-202ENST00000577906 PSEN1P49768 467 aa17.27■□□□□ 0.36
SNRPD1-202ENST00000577906 ATN1P54259 1190 aaPredicted RBP17.27■□□□□ 0.36
SNRPD1-202ENST00000577906 RNF25Q96BH1 459 aaPredicted RBP17.26■□□□□ 0.35
SNRPD1-202ENST00000577906 TAOK2Q9UL54 1235 aa17.25■□□□□ 0.35
SNRPD1-202ENST00000577906 VGFO15240 615 aaPredicted RBP17.21■□□□□ 0.35
SNRPD1-202ENST00000577906 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.35
SNRPD1-202ENST00000577906 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
SNRPD1-202ENST00000577906 RGL2O15211 777 aa17.19■□□□□ 0.34
SNRPD1-202ENST00000577906 TRIM35Q9UPQ4 493 aa17.19■□□□□ 0.34
SNRPD1-202ENST00000577906 SLC39A7Q92504 469 aa17.18■□□□□ 0.34
SNRPD1-202ENST00000577906 C7P10643 843 aa17.15■□□□□ 0.34
SNRPD1-202ENST00000577906 GOLGA2Q08379 1002 aa17.12■□□□□ 0.33
SNRPD1-202ENST00000577906 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.1■□□□□ 0.33
SNRPD1-202ENST00000577906 IER5LQ5T953 404 aa17.1■□□□□ 0.33
SNRPD1-202ENST00000577906 ZFP91Q96JP5 570 aaPredicted RBP17.1■□□□□ 0.33
SNRPD1-202ENST00000577906 METRNQ9UJH8 293 aa17.1■□□□□ 0.33
SNRPD1-202ENST00000577906 RTN4Q9NQC3 1192 aaKnown RBP17.05■□□□□ 0.32
SNRPD1-202ENST00000577906 MKRN3Q13064 507 aaKnown RBP17.04■□□□□ 0.32
SNRPD1-202ENST00000577906 CABP2Q9NPB3 220 aa17.04■□□□□ 0.32
SNRPD1-202ENST00000577906 SEC24BO95487 1268 aa17.01■□□□□ 0.31
SNRPD1-202ENST00000577906 STK25O00506 426 aa17■□□□□ 0.31
SNRPD1-202ENST00000577906 BCL11BQ9C0K0 894 aaPredicted RBP16.99■□□□□ 0.31
SNRPD1-202ENST00000577906 STK24Q9Y6E0 443 aa16.97■□□□□ 0.31
SNRPD1-202ENST00000577906 PLCG2P16885 1265 aa16.94■□□□□ 0.3
SNRPD1-202ENST00000577906 IRX5P78411 483 aaPredicted RBP16.93■□□□□ 0.3
SNRPD1-202ENST00000577906 LHX8Q68G74 356 aa16.93■□□□□ 0.3
SNRPD1-202ENST00000577906 OCEL1Q9H607 264 aa16.92■□□□□ 0.3
SNRPD1-202ENST00000577906 COLQQ9Y215 455 aaPredicted RBP16.92■□□□□ 0.3
SNRPD1-202ENST00000577906 POTEFA5A3E0 1075 aa16.91■□□□□ 0.3
SNRPD1-202ENST00000577906 DCAF8L2P0C7V8 631 aa16.91■□□□□ 0.3
SNRPD1-202ENST00000577906 EFCAB3Q8N7B9 438 aa16.91■□□□□ 0.3
SNRPD1-202ENST00000577906 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.89■□□□□ 0.29
SNRPD1-202ENST00000577906 SOX12O15370 315 aa16.87■□□□□ 0.29
SNRPD1-202ENST00000577906 CHGAP10645 457 aaKnown RBP16.87■□□□□ 0.29
SNRPD1-202ENST00000577906 HS6ST3Q8IZP7 471 aa16.87■□□□□ 0.29
SNRPD1-202ENST00000577906 POTEB2H3BUK9 544 aa16.83■□□□□ 0.28
SNRPD1-202ENST00000577906 ILDR1Q86SU0 546 aaPredicted RBP16.81■□□□□ 0.28
SNRPD1-202ENST00000577906 PDCD7Q8N8D1 485 aaKnown RBP16.8■□□□□ 0.28
SNRPD1-202ENST00000577906 MAMSTRQ6ZN01 415 aa16.76■□□□□ 0.27
SNRPD1-202ENST00000577906 NLRP6P59044 892 aa16.75■□□□□ 0.27
SNRPD1-202ENST00000577906 PHF8Q9UPP1 1060 aa16.74■□□□□ 0.27
SNRPD1-202ENST00000577906 L3MBTL3Q96JM7 780 aaPredicted RBP16.73■□□□□ 0.27
SNRPD1-202ENST00000577906 DNAJC5Q9H3Z4 198 aa16.72■□□□□ 0.27
SNRPD1-202ENST00000577906 POTEJP0CG39 1038 aa16.71■□□□□ 0.27
SNRPD1-202ENST00000577906 MFRPQ9BY79 579 aa16.69■□□□□ 0.26
SNRPD1-202ENST00000577906 SCUBE2Q9NQ36 999 aa16.69■□□□□ 0.26
SNRPD1-202ENST00000577906 DPY19L2Q6NUT2 758 aa16.67■□□□□ 0.26
SNRPD1-202ENST00000577906 G3V3G9 751 aa16.66■□□□□ 0.26
SNRPD1-202ENST00000577906 FBXO22Q8NEZ5 403 aa16.66■□□□□ 0.26
SNRPD1-202ENST00000577906 OTUD5Q96G74 571 aa16.64■□□□□ 0.25
SNRPD1-202ENST00000577906 MS4A4AQ96JQ5 239 aa16.64■□□□□ 0.25
SNRPD1-202ENST00000577906 BOLA1Q9Y3E2 137 aa16.61■□□□□ 0.25
SNRPD1-202ENST00000577906 RYDENQ9NUL5 291 aaKnown RBP16.6■□□□□ 0.25
SNRPD1-202ENST00000577906 NKX1-1Q15270 411 aaPredicted RBP16.58■□□□□ 0.24
SNRPD1-202ENST00000577906 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.56■□□□□ 0.24
SNRPD1-202ENST00000577906 C3orf67Q6ZVT6 689 aa16.55■□□□□ 0.24
SNRPD1-202ENST00000577906 BBXQ8WY36 941 aaPredicted RBP16.52■□□□□ 0.24
SNRPD1-202ENST00000577906 TMEM121BQ9BXQ6 578 aaPredicted RBP16.52■□□□□ 0.24
SNRPD1-202ENST00000577906 MICALL2Q8IY33 904 aa16.5■□□□□ 0.23
SNRPD1-202ENST00000577906 SLAIN1Q8ND83 568 aa16.47■□□□□ 0.23
SNRPD1-202ENST00000577906 GTPBP6O43824 516 aaPredicted RBP16.43■□□□□ 0.22
SNRPD1-202ENST00000577906 PPP1R37O75864 691 aa16.43■□□□□ 0.22
SNRPD1-202ENST00000577906 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.43■□□□□ 0.22
SNRPD1-202ENST00000577906 SPRYD3Q8NCJ5 442 aa16.32■□□□□ 0.2
SNRPD1-202ENST00000577906 SNPHO15079 494 aa16.27■□□□□ 0.2
SNRPD1-202ENST00000577906 TMEM92Q6UXU6 159 aa16.26■□□□□ 0.19
SNRPD1-202ENST00000577906 PAXIP1Q6ZW49 1069 aaPredicted RBP16.25■□□□□ 0.19
SNRPD1-202ENST00000577906 CFAP44Q96MT7 982 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms