RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 ASTLQ6HA08 431 aaPredicted RBP12.5□□□□□ -0.41
TOP2A-202ENST00000577541 MAMSTRQ6ZN01 415 aa12.5□□□□□ -0.41
TOP2A-202ENST00000577541 SLC39A7Q92504 469 aa12.49□□□□□ -0.41
TOP2A-202ENST00000577541 MS4A3Q96HJ5 214 aa12.47□□□□□ -0.41
TOP2A-202ENST00000577541 ATMINO43313 823 aaPredicted RBP12.46□□□□□ -0.41
TOP2A-202ENST00000577541 FAM163AQ96GL9 167 aaPredicted RBP12.43□□□□□ -0.42
TOP2A-202ENST00000577541 SCUBE2Q9NQ36 999 aa12.38□□□□□ -0.43
TOP2A-202ENST00000577541 SPDYE4A6NLX3 237 aa12.37□□□□□ -0.43
TOP2A-202ENST00000577541 CSRNP3Q8WYN3 585 aa12.36□□□□□ -0.43
TOP2A-202ENST00000577541 POTEFA5A3E0 1075 aa12.35□□□□□ -0.43
TOP2A-202ENST00000577541 ATN1P54259 1190 aaPredicted RBP12.34□□□□□ -0.43
TOP2A-202ENST00000577541 TRPC6Q9Y210 931 aa12.28□□□□□ -0.44
TOP2A-202ENST00000577541 TSPYL2Q9H2G4 693 aaPredicted RBP12.25□□□□□ -0.45
TOP2A-202ENST00000577541 CCDC61Q9Y6R9 512 aa12.25□□□□□ -0.45
TOP2A-202ENST00000577541 KIF12Q96FN5 646 aa12.21□□□□□ -0.45
TOP2A-202ENST00000577541 BMP2KQ9NSY1 1161 aaPredicted RBP12.21□□□□□ -0.45
TOP2A-202ENST00000577541 CDAN1Q8IWY9 1227 aa12.18□□□□□ -0.46
TOP2A-202ENST00000577541 COLQQ9Y215 455 aaPredicted RBP12.16□□□□□ -0.46
TOP2A-202ENST00000577541 TIE1P35590 1138 aa12.12□□□□□ -0.47
TOP2A-202ENST00000577541 MAP3K13O43283 966 aa12.11□□□□□ -0.47
TOP2A-202ENST00000577541 SEC24BO95487 1268 aa12.11□□□□□ -0.47
TOP2A-202ENST00000577541 TTLL13PA6NNM8 815 aa12.04□□□□□ -0.48
TOP2A-202ENST00000577541 RASEFQ8IZ41 740 aa12.03□□□□□ -0.48
TOP2A-202ENST00000577541 PROM2Q8N271 834 aa12.03□□□□□ -0.48
TOP2A-202ENST00000577541 ST18O60284 1047 aa12□□□□□ -0.49
TOP2A-202ENST00000577541 IER5LQ5T953 404 aa12□□□□□ -0.49
TOP2A-202ENST00000577541 SLAIN1Q8ND83 568 aa11.99□□□□□ -0.49
TOP2A-202ENST00000577541 TRIM35Q9UPQ4 493 aa11.97□□□□□ -0.49
TOP2A-202ENST00000577541 PLEKHG5O94827 1062 aa11.95□□□□□ -0.5
TOP2A-202ENST00000577541 MMRN1Q13201 1228 aa11.93□□□□□ -0.5
TOP2A-202ENST00000577541 SGIP1Q9BQI5 828 aa11.91□□□□□ -0.5
TOP2A-202ENST00000577541 SPNS2Q8IVW8 549 aa11.9□□□□□ -0.5
TOP2A-202ENST00000577541 MIER1Q8N108 512 aa11.9□□□□□ -0.5
TOP2A-202ENST00000577541 PCDHB13Q9Y5F0 798 aa11.88□□□□□ -0.51
TOP2A-202ENST00000577541 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
TOP2A-202ENST00000577541 TMEM121BQ9BXQ6 578 aaPredicted RBP11.84□□□□□ -0.51
TOP2A-202ENST00000577541 PLCG2P16885 1265 aa11.83□□□□□ -0.52
TOP2A-202ENST00000577541 EHMT2Q96KQ7 1210 aa11.83□□□□□ -0.52
TOP2A-202ENST00000577541 TMEM106CQ9BVX2 250 aa11.8□□□□□ -0.52
TOP2A-202ENST00000577541 SNPHO15079 494 aa11.78□□□□□ -0.52
TOP2A-202ENST00000577541 IRX5P78411 483 aaPredicted RBP11.78□□□□□ -0.52
TOP2A-202ENST00000577541 NUBP1P53384 320 aa11.77□□□□□ -0.53
TOP2A-202ENST00000577541 MARVELD3Q96A59 401 aa11.74□□□□□ -0.53
TOP2A-202ENST00000577541 OCEL1Q9H607 264 aa11.72□□□□□ -0.53
TOP2A-202ENST00000577541 PLCD3Q8N3E9 789 aa11.71□□□□□ -0.53
TOP2A-202ENST00000577541 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.7□□□□□ -0.54
TOP2A-202ENST00000577541 ZBTB47Q9UFB7 747 aaPredicted RBP11.68□□□□□ -0.54
TOP2A-202ENST00000577541 POTEB3A0JP26 581 aa11.65□□□□□ -0.54
TOP2A-202ENST00000577541 POTEBQ6S5H4 581 aa11.65□□□□□ -0.54
TOP2A-202ENST00000577541 FAM212AQ96EL1 285 aa11.64□□□□□ -0.55
TOP2A-202ENST00000577541 EMP3P54852 163 aa11.61□□□□□ -0.55
TOP2A-202ENST00000577541 KRTAP3-3Q9BYR6 98 aa11.6□□□□□ -0.55
TOP2A-202ENST00000577541 KRTAP3-2Q9BYR7 98 aa11.6□□□□□ -0.55
TOP2A-202ENST00000577541 PCDHB8Q9UN66 801 aa11.55□□□□□ -0.56
TOP2A-202ENST00000577541 PDCD7Q8N8D1 485 aaKnown RBP11.54□□□□□ -0.56
TOP2A-202ENST00000577541 HS3ST6Q96QI5 342 aa11.54□□□□□ -0.56
TOP2A-202ENST00000577541 PYGBP11216 843 aa11.53□□□□□ -0.56
TOP2A-202ENST00000577541 C3orf67Q6ZVT6 689 aa11.53□□□□□ -0.56
TOP2A-202ENST00000577541 FAM205CA6NFA0 338 aa11.52□□□□□ -0.57
TOP2A-202ENST00000577541 DCAF8Q5TAQ9 597 aa11.48□□□□□ -0.57
TOP2A-202ENST00000577541 L3MBTL3Q96JM7 780 aaPredicted RBP11.48□□□□□ -0.57
TOP2A-202ENST00000577541 GOLGA2Q08379 1002 aa11.41□□□□□ -0.58
TOP2A-202ENST00000577541 MKRN3Q13064 507 aaKnown RBP11.41□□□□□ -0.58
TOP2A-202ENST00000577541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.36□□□□□ -0.59
TOP2A-202ENST00000577541 HOXB3P14651 431 aaPredicted RBP11.34□□□□□ -0.59
TOP2A-202ENST00000577541 DPY19L2Q6NUT2 758 aa11.34□□□□□ -0.59
TOP2A-202ENST00000577541 ZNF467Q7Z7K2 595 aaPredicted RBP11.33□□□□□ -0.6
TOP2A-202ENST00000577541 ILDR1Q86SU0 546 aaPredicted RBP11.31□□□□□ -0.6
TOP2A-202ENST00000577541 RNF166Q96A37 237 aaPredicted RBP11.3□□□□□ -0.6
TOP2A-202ENST00000577541 HOXB1P14653 301 aaPredicted RBP11.27□□□□□ -0.61
TOP2A-202ENST00000577541 ZNF710Q8N1W2 664 aa11.27□□□□□ -0.61
TOP2A-202ENST00000577541 ERBB3P21860 1342 aa11.27□□□□□ -0.61
TOP2A-202ENST00000577541 PSEN1P49768 467 aa11.24□□□□□ -0.61
TOP2A-202ENST00000577541 G3V3G9 751 aa11.23□□□□□ -0.61
TOP2A-202ENST00000577541 GSE1Q14687 1217 aa11.23□□□□□ -0.61
TOP2A-202ENST00000577541 MYT1LQ9UL68 1186 aa11.22□□□□□ -0.61
TOP2A-202ENST00000577541 DOK7Q18PE1 504 aa11.21□□□□□ -0.61
TOP2A-202ENST00000577541 BOLA1Q9Y3E2 137 aa11.21□□□□□ -0.61
TOP2A-202ENST00000577541 CHRM1P11229 460 aaPredicted RBP11.2□□□□□ -0.62
TOP2A-202ENST00000577541 FKBP8Q14318 412 aa11.18□□□□□ -0.62
TOP2A-202ENST00000577541 VARS2Q5ST30 1063 aaKnown RBP11.16□□□□□ -0.62
TOP2A-202ENST00000577541 RIMBP2O15034 1052 aa11.14□□□□□ -0.63
TOP2A-202ENST00000577541 PDAP1Q13442 181 aaKnown RBP11.13□□□□□ -0.63
TOP2A-202ENST00000577541 CABP2Q9NPB3 220 aa11.12□□□□□ -0.63
TOP2A-202ENST00000577541 KLHL34Q8N239 644 aa11.11□□□□□ -0.63
TOP2A-202ENST00000577541 ZNF687Q8N1G0 1237 aa11.1□□□□□ -0.63
TOP2A-202ENST00000577541 FBXO3Q9UK99 471 aa11.1□□□□□ -0.63
TOP2A-202ENST00000577541 PTGER2P43116 358 aa11.09□□□□□ -0.63
TOP2A-202ENST00000577541 TMEM92Q6UXU6 159 aa11.07□□□□□ -0.64
TOP2A-202ENST00000577541 ZSWIM6Q9HCJ5 1215 aa11.05□□□□□ -0.64
TOP2A-202ENST00000577541 GPR153Q6NV75 609 aa11.01□□□□□ -0.65
TOP2A-202ENST00000577541 VASPP50552 380 aaPredicted RBP10.99□□□□□ -0.65
TOP2A-202ENST00000577541 ANKRD13DQ6ZTN6 518 aa10.99□□□□□ -0.65
TOP2A-202ENST00000577541 EFCAB3Q8N7B9 438 aa10.95□□□□□ -0.66
TOP2A-202ENST00000577541 MICALL2Q8IY33 904 aa10.92□□□□□ -0.66
TOP2A-202ENST00000577541 KHSRPQ92945 711 aaKnown RBP eCLIP10.91□□□□□ -0.66
TOP2A-202ENST00000577541 ARSIQ5FYB1 569 aa10.9□□□□□ -0.66
TOP2A-202ENST00000577541 LSM11P83369 360 aaKnown RBP eCLIP10.89□□□□□ -0.67
TOP2A-202ENST00000577541 PLA2G2EQ9NZK7 142 aa10.89□□□□□ -0.67
TOP2A-202ENST00000577541 CIZ1Q9ULV3 898 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms