RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 SALL2Q9Y467 1007 aaPredicted RBP11.48□□□□□ -0.57
TOM1L1-220ENST00000575333 YTHDC1Q96MU7 727 aaKnown RBP11.47□□□□□ -0.57
TOM1L1-220ENST00000575333 SPDYE2BA6NHP3 402 aa11.46□□□□□ -0.58
TOM1L1-220ENST00000575333 SPDYE6P0CI01 402 aa11.46□□□□□ -0.58
TOM1L1-220ENST00000575333 SPDYE2Q495Y8 402 aa11.46□□□□□ -0.58
TOM1L1-220ENST00000575333 FANCIQ9NVI1 1328 aa11.46□□□□□ -0.58
TOM1L1-220ENST00000575333 DEKP35659 375 aaKnown RBP11.45□□□□□ -0.58
TOM1L1-220ENST00000575333 PABPN1Q86U42 306 aaKnown RBP eCLIP11.44□□□□□ -0.58
TOM1L1-220ENST00000575333 RBM19Q9Y4C8 960 aaKnown RBP11.42□□□□□ -0.58
TOM1L1-220ENST00000575333 CCER1Q8TC90 406 aaPredicted RBP11.42□□□□□ -0.58
TOM1L1-220ENST00000575333 SSUH2Q9Y2M2 353 aa11.42□□□□□ -0.58
TOM1L1-220ENST00000575333 BICRAQ9NZM4 1560 aa11.4□□□□□ -0.59
TOM1L1-220ENST00000575333 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
TOM1L1-220ENST00000575333 NEFLP07196 543 aa11.38□□□□□ -0.59
TOM1L1-220ENST00000575333 GLIPR1L2Q4G1C9 344 aa11.37□□□□□ -0.59
TOM1L1-220ENST00000575333 SHROOM4Q9ULL8 1493 aa11.35□□□□□ -0.59
TOM1L1-220ENST00000575333 LOC105371045A0A1W2PR82 267 aa11.34□□□□□ -0.59
TOM1L1-220ENST00000575333 MIER1Q8N108 512 aa11.33□□□□□ -0.6
TOM1L1-220ENST00000575333 CCDC136Q96JN2 1154 aa11.32□□□□□ -0.6
TOM1L1-220ENST00000575333 FBXO3Q9UK99 471 aa11.32□□□□□ -0.6
TOM1L1-220ENST00000575333 RBM42Q9BTD8 480 aaKnown RBP11.27□□□□□ -0.61
TOM1L1-220ENST00000575333 VASPP50552 380 aaPredicted RBP11.23□□□□□ -0.61
TOM1L1-220ENST00000575333 AKT1S1Q96B36 256 aa11.19□□□□□ -0.62
TOM1L1-220ENST00000575333 RTN4Q9NQC3 1192 aaKnown RBP11.18□□□□□ -0.62
TOM1L1-220ENST00000575333 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.18□□□□□ -0.62
TOM1L1-220ENST00000575333 RANGAP1P46060 587 aaPredicted RBP11.16□□□□□ -0.62
TOM1L1-220ENST00000575333 RSPH6AQ9H0K4 717 aa11.16□□□□□ -0.62
TOM1L1-220ENST00000575333 C11orf95C9JLR9 678 aaPredicted RBP11.15□□□□□ -0.62
TOM1L1-220ENST00000575333 RTL5Q5HYW3 569 aaPredicted RBP11.13□□□□□ -0.63
TOM1L1-220ENST00000575333 IFNLR1Q8IU57 520 aaPredicted RBP11.13□□□□□ -0.63
TOM1L1-220ENST00000575333 REM2Q8IYK8 340 aaPredicted RBP11.13□□□□□ -0.63
TOM1L1-220ENST00000575333 STAG3Q9UJ98 1225 aa11.12□□□□□ -0.63
TOM1L1-220ENST00000575333 AMER1Q5JTC6 1135 aaPredicted RBP11.1□□□□□ -0.63
TOM1L1-220ENST00000575333 PDE4CQ08493 712 aa11.09□□□□□ -0.63
TOM1L1-220ENST00000575333 EIF4G1Q04637 1599 aaKnown RBP11.09□□□□□ -0.63
TOM1L1-220ENST00000575333 IL27Q8NEV9 243 aa11.09□□□□□ -0.63
TOM1L1-220ENST00000575333 ZMYND15Q9H091 742 aa11.08□□□□□ -0.64
TOM1L1-220ENST00000575333 CDK11AQ9UQ88 783 aaPredicted RBP11.08□□□□□ -0.64
TOM1L1-220ENST00000575333 CLEC11AQ9Y240 323 aa11.08□□□□□ -0.64
TOM1L1-220ENST00000575333 PDIA4P13667 645 aaKnown RBP11.07□□□□□ -0.64
TOM1L1-220ENST00000575333 SPDYE1Q8NFV5 336 aaPredicted RBP11.07□□□□□ -0.64
TOM1L1-220ENST00000575333 ARXQ96QS3 562 aa11.07□□□□□ -0.64
TOM1L1-220ENST00000575333 NOP58Q9Y2X3 529 aaKnown RBP11.06□□□□□ -0.64
TOM1L1-220ENST00000575333 FGD1P98174 961 aa11.05□□□□□ -0.64
TOM1L1-220ENST00000575333 CECR2Q9BXF3 1484 aa11.05□□□□□ -0.64
TOM1L1-220ENST00000575333 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
TOM1L1-220ENST00000575333 CC2D2AQ9P2K1 1620 aa11.03□□□□□ -0.64
TOM1L1-220ENST00000575333 PITPNM1O00562 1244 aa11.02□□□□□ -0.65
TOM1L1-220ENST00000575333 USP35Q9P2H5 1018 aa11.01□□□□□ -0.65
TOM1L1-220ENST00000575333 BCANQ96GW7 911 aa11□□□□□ -0.65
TOM1L1-220ENST00000575333 AAMPQ13685 434 aa10.99□□□□□ -0.65
TOM1L1-220ENST00000575333 VSIG10Q8N0Z9 540 aa10.99□□□□□ -0.65
TOM1L1-220ENST00000575333 KLHL34Q8N239 644 aa10.99□□□□□ -0.65
TOM1L1-220ENST00000575333 SMARCA4P51532 1647 aa10.99□□□□□ -0.65
TOM1L1-220ENST00000575333 WASHC2CQ9Y4E1 1318 aa10.98□□□□□ -0.65
TOM1L1-220ENST00000575333 WASHC2AQ641Q2 1341 aa10.98□□□□□ -0.65
TOM1L1-220ENST00000575333 BAZ1AQ9NRL2 1556 aaPredicted RBP10.98□□□□□ -0.65
TOM1L1-220ENST00000575333 PRR29P0C7W0 189 aa10.98□□□□□ -0.65
TOM1L1-220ENST00000575333 TAF7LQ5H9L4 462 aa10.95□□□□□ -0.66
TOM1L1-220ENST00000575333 MROH2BQ7Z745 1585 aa10.94□□□□□ -0.66
TOM1L1-220ENST00000575333 NBR1Q14596 966 aa10.94□□□□□ -0.66
TOM1L1-220ENST00000575333 WRNQ14191 1432 aaPredicted RBP eCLIP10.93□□□□□ -0.66
TOM1L1-220ENST00000575333 RRP9O43818 475 aaKnown RBP10.92□□□□□ -0.66
TOM1L1-220ENST00000575333 RBM10P98175 930 aaKnown RBP10.91□□□□□ -0.66
TOM1L1-220ENST00000575333 FAM43AQ8N2R8 423 aa10.91□□□□□ -0.66
TOM1L1-220ENST00000575333 SPOCK2Q92563 424 aa10.91□□□□□ -0.66
TOM1L1-220ENST00000575333 CREBZFQ9NS37 354 aa10.9□□□□□ -0.66
TOM1L1-220ENST00000575333 ZNF326Q5BKZ1 582 aaKnown RBP10.89□□□□□ -0.67
TOM1L1-220ENST00000575333 ATAD2BQ9ULI0 1458 aa10.89□□□□□ -0.67
TOM1L1-220ENST00000575333 SMARCA2P51531 1590 aa10.88□□□□□ -0.67
TOM1L1-220ENST00000575333 RSF1Q96T23 1441 aaPredicted RBP10.85□□□□□ -0.67
TOM1L1-220ENST00000575333 WIZO95785 1651 aa10.85□□□□□ -0.67
TOM1L1-220ENST00000575333 A0A0U1RQG5 324 aaPredicted RBP10.84□□□□□ -0.67
TOM1L1-220ENST00000575333 ANP32AP39687 249 aaKnown RBP10.84□□□□□ -0.67
TOM1L1-220ENST00000575333 PEG3Q9GZU2 1588 aa10.84□□□□□ -0.67
TOM1L1-220ENST00000575333 NCAPD3P42695 1498 aa10.84□□□□□ -0.67
TOM1L1-220ENST00000575333 ITGAEP38570 1179 aa10.84□□□□□ -0.67
TOM1L1-220ENST00000575333 IPO9Q96P70 1041 aaKnown RBP10.84□□□□□ -0.67
TOM1L1-220ENST00000575333 ZBTB47Q9UFB7 747 aaPredicted RBP10.84□□□□□ -0.67
TOM1L1-220ENST00000575333 PKD2Q13563 968 aa10.83□□□□□ -0.68
TOM1L1-220ENST00000575333 MNX1P50219 401 aaPredicted RBP10.82□□□□□ -0.68
TOM1L1-220ENST00000575333 CHADLQ6NUI6 762 aa10.82□□□□□ -0.68
TOM1L1-220ENST00000575333 TIMELESSQ9UNS1 1208 aa10.82□□□□□ -0.68
TOM1L1-220ENST00000575333 BAZ1BQ9UIG0 1483 aaKnown RBP10.82□□□□□ -0.68
TOM1L1-220ENST00000575333 HSP90AA2PQ14568 343 aaPredicted RBP10.81□□□□□ -0.68
TOM1L1-220ENST00000575333 BCL11BQ9C0K0 894 aaPredicted RBP10.81□□□□□ -0.68
TOM1L1-220ENST00000575333 NEFMP07197 916 aa10.81□□□□□ -0.68
TOM1L1-220ENST00000575333 HMGXB3Q12766 1538 aa10.81□□□□□ -0.68
TOM1L1-220ENST00000575333 PPM1GO15355 546 aaPredicted RBP10.8□□□□□ -0.68
TOM1L1-220ENST00000575333 CHRDL2Q6WN34 429 aa10.79□□□□□ -0.68
TOM1L1-220ENST00000575333 PAK3O75914 559 aaPredicted RBP10.79□□□□□ -0.68
TOM1L1-220ENST00000575333 CENPJQ9HC77 1338 aaPredicted RBP10.78□□□□□ -0.68
TOM1L1-220ENST00000575333 PPP4R2Q9NY27 417 aa10.77□□□□□ -0.68
TOM1L1-220ENST00000575333 EEA1Q15075 1411 aa10.77□□□□□ -0.69
TOM1L1-220ENST00000575333 CALD1Q05682 793 aaKnown RBP10.76□□□□□ -0.69
TOM1L1-220ENST00000575333 NUBP1P53384 320 aa10.75□□□□□ -0.69
TOM1L1-220ENST00000575333 FXR2P51116 673 aaKnown RBP eCLIP10.74□□□□□ -0.69
TOM1L1-220ENST00000575333 CCER2I3L3R5 266 aa10.74□□□□□ -0.69
TOM1L1-220ENST00000575333 HSP90AA1P07900 732 aaKnown RBP10.74□□□□□ -0.69
TOM1L1-220ENST00000575333 PRKAR2AP13861 404 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms