RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 CIZ1Q9ULV3 898 aaPredicted RBP13.95□□□□□ -0.18
CDC27-216ENST00000574304 CCDC61Q9Y6R9 512 aa13.91□□□□□ -0.18
CDC27-216ENST00000574304 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.18
CDC27-216ENST00000574304 PHF12Q96QT6 1004 aa13.86□□□□□ -0.19
CDC27-216ENST00000574304 PYGBP11216 843 aa13.81□□□□□ -0.2
CDC27-216ENST00000574304 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
CDC27-216ENST00000574304 PKD2Q13563 968 aa13.8□□□□□ -0.2
CDC27-216ENST00000574304 TRIM41Q8WV44 630 aa13.8□□□□□ -0.2
CDC27-216ENST00000574304 KIF12Q96FN5 646 aa13.79□□□□□ -0.2
CDC27-216ENST00000574304 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
CDC27-216ENST00000574304 CHRM1P11229 460 aaPredicted RBP13.77□□□□□ -0.21
CDC27-216ENST00000574304 ECM2O94769 699 aaPredicted RBP13.75□□□□□ -0.21
CDC27-216ENST00000574304 CLCN6P51797 869 aa13.75□□□□□ -0.21
CDC27-216ENST00000574304 MAP3K13O43283 966 aa13.74□□□□□ -0.21
CDC27-216ENST00000574304 RTN4Q9NQC3 1192 aaKnown RBP13.73□□□□□ -0.21
CDC27-216ENST00000574304 GABBR2O75899 941 aa13.72□□□□□ -0.21
CDC27-216ENST00000574304 PCDHB13Q9Y5F0 798 aa13.71□□□□□ -0.21
CDC27-216ENST00000574304 SGIP1Q9BQI5 828 aa13.7□□□□□ -0.22
CDC27-216ENST00000574304 MS4A3Q96HJ5 214 aa13.69□□□□□ -0.22
CDC27-216ENST00000574304 GALR2O43603 387 aaPredicted RBP13.67□□□□□ -0.22
CDC27-216ENST00000574304 IFNL1Q8IU54 200 aa13.65□□□□□ -0.22
CDC27-216ENST00000574304 ZNF467Q7Z7K2 595 aaPredicted RBP13.63□□□□□ -0.23
CDC27-216ENST00000574304 PCDHB8Q9UN66 801 aa13.63□□□□□ -0.23
CDC27-216ENST00000574304 RNF25Q96BH1 459 aaPredicted RBP13.61□□□□□ -0.23
CDC27-216ENST00000574304 RGL2O15211 777 aa13.6□□□□□ -0.23
CDC27-216ENST00000574304 RIOK3O14730 519 aaKnown RBP13.58□□□□□ -0.24
CDC27-216ENST00000574304 TRPC6Q9Y210 931 aa13.56□□□□□ -0.24
CDC27-216ENST00000574304 PDAP1Q13442 181 aaKnown RBP13.51□□□□□ -0.25
CDC27-216ENST00000574304 DCBLD2Q96PD2 775 aa13.51□□□□□ -0.25
CDC27-216ENST00000574304 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
CDC27-216ENST00000574304 TIE1P35590 1138 aa13.5□□□□□ -0.25
CDC27-216ENST00000574304 PSEN1P49768 467 aa13.49□□□□□ -0.25
CDC27-216ENST00000574304 TAOK2Q9UL54 1235 aa13.49□□□□□ -0.25
CDC27-216ENST00000574304 BMP2KQ9NSY1 1161 aaPredicted RBP13.48□□□□□ -0.25
CDC27-216ENST00000574304 TMEM106CQ9BVX2 250 aa13.46□□□□□ -0.25
CDC27-216ENST00000574304 TTLL13PA6NNM8 815 aa13.45□□□□□ -0.26
CDC27-216ENST00000574304 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.43□□□□□ -0.26
CDC27-216ENST00000574304 ATMINO43313 823 aaPredicted RBP13.43□□□□□ -0.26
CDC27-216ENST00000574304 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
CDC27-216ENST00000574304 POTEIP0CG38 1075 aa13.43□□□□□ -0.26
CDC27-216ENST00000574304 ASTLQ6HA08 431 aaPredicted RBP13.43□□□□□ -0.26
CDC27-216ENST00000574304 ZFP91Q96JP5 570 aaPredicted RBP13.43□□□□□ -0.26
CDC27-216ENST00000574304 ATN1P54259 1190 aaPredicted RBP13.4□□□□□ -0.26
CDC27-216ENST00000574304 STK25O00506 426 aa13.37□□□□□ -0.27
CDC27-216ENST00000574304 BCL11BQ9C0K0 894 aaPredicted RBP13.36□□□□□ -0.27
CDC27-216ENST00000574304 TRIM35Q9UPQ4 493 aa13.36□□□□□ -0.27
CDC27-216ENST00000574304 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
CDC27-216ENST00000574304 STK24Q9Y6E0 443 aa13.34□□□□□ -0.27
CDC27-216ENST00000574304 CHGAP10645 457 aaKnown RBP13.33□□□□□ -0.28
CDC27-216ENST00000574304 CABP2Q9NPB3 220 aa13.33□□□□□ -0.28
CDC27-216ENST00000574304 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
CDC27-216ENST00000574304 HS6ST3Q8IZP7 471 aa13.31□□□□□ -0.28
CDC27-216ENST00000574304 MKRN3Q13064 507 aaKnown RBP13.27□□□□□ -0.29
CDC27-216ENST00000574304 SLC39A7Q92504 469 aa13.27□□□□□ -0.29
CDC27-216ENST00000574304 EFCAB3Q8N7B9 438 aa13.25□□□□□ -0.29
CDC27-216ENST00000574304 C7P10643 843 aa13.24□□□□□ -0.29
CDC27-216ENST00000574304 IER5LQ5T953 404 aa13.24□□□□□ -0.29
CDC27-216ENST00000574304 METRNQ9UJH8 293 aa13.22□□□□□ -0.29
CDC27-216ENST00000574304 SOX12O15370 315 aa13.18□□□□□ -0.3
CDC27-216ENST00000574304 SEC24BO95487 1268 aa13.17□□□□□ -0.3
CDC27-216ENST00000574304 DNAJC5Q9H3Z4 198 aa13.17□□□□□ -0.3
CDC27-216ENST00000574304 IRX5P78411 483 aaPredicted RBP13.16□□□□□ -0.3
CDC27-216ENST00000574304 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.16□□□□□ -0.32e-7■■■■□ 25.8
CDC27-216ENST00000574304 PLCG2P16885 1265 aa13.14□□□□□ -0.31
CDC27-216ENST00000574304 OCEL1Q9H607 264 aa13.14□□□□□ -0.31
CDC27-216ENST00000574304 COLQQ9Y215 455 aaPredicted RBP13.14□□□□□ -0.31
CDC27-216ENST00000574304 PHF8Q9UPP1 1060 aa13.13□□□□□ -0.31
CDC27-216ENST00000574304 POTEFA5A3E0 1075 aa13.12□□□□□ -0.31
CDC27-216ENST00000574304 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
CDC27-216ENST00000574304 MFRPQ9BY79 579 aa13.12□□□□□ -0.31
CDC27-216ENST00000574304 NLRP6P59044 892 aa13.11□□□□□ -0.31
CDC27-216ENST00000574304 ILDR1Q86SU0 546 aaPredicted RBP13.11□□□□□ -0.31
CDC27-216ENST00000574304 BBXQ8WY36 941 aaPredicted RBP13.11□□□□□ -0.31
CDC27-216ENST00000574304 PDCD7Q8N8D1 485 aaKnown RBP13.09□□□□□ -0.31
CDC27-216ENST00000574304 FBXO22Q8NEZ5 403 aa13.07□□□□□ -0.32
CDC27-216ENST00000574304 MS4A4AQ96JQ5 239 aa13.05□□□□□ -0.32
CDC27-216ENST00000574304 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.03□□□□□ -0.32
CDC27-216ENST00000574304 DPY19L2Q6NUT2 758 aa13.02□□□□□ -0.33
CDC27-216ENST00000574304 RYDENQ9NUL5 291 aaKnown RBP13.02□□□□□ -0.33
CDC27-216ENST00000574304 POTEB2H3BUK9 544 aa13□□□□□ -0.33
CDC27-216ENST00000574304 GTPBP6O43824 516 aaPredicted RBP12.99□□□□□ -0.33
CDC27-216ENST00000574304 L3MBTL3Q96JM7 780 aaPredicted RBP12.97□□□□□ -0.33
CDC27-216ENST00000574304 LHX8Q68G74 356 aa12.96□□□□□ -0.33
CDC27-216ENST00000574304 POTEJP0CG39 1038 aa12.94□□□□□ -0.34
CDC27-216ENST00000574304 SPRYD3Q8NCJ5 442 aa12.94□□□□□ -0.34
CDC27-216ENST00000574304 BOLA1Q9Y3E2 137 aa12.94□□□□□ -0.34
CDC27-216ENST00000574304 G3V3G9 751 aa12.93□□□□□ -0.34
CDC27-216ENST00000574304 PPP1R37O75864 691 aa12.93□□□□□ -0.34
CDC27-216ENST00000574304 PAXIP1Q6ZW49 1069 aaPredicted RBP12.93□□□□□ -0.34
CDC27-216ENST00000574304 CFAP44Q96MT7 982 aa12.91□□□□□ -0.34
CDC27-216ENST00000574304 MAMSTRQ6ZN01 415 aa12.88□□□□□ -0.35
CDC27-216ENST00000574304 MICALL2Q8IY33 904 aa12.88□□□□□ -0.35
CDC27-216ENST00000574304 TMEM121BQ9BXQ6 578 aaPredicted RBP12.88□□□□□ -0.35
CDC27-216ENST00000574304 C3orf67Q6ZVT6 689 aa12.85□□□□□ -0.35
CDC27-216ENST00000574304 SCUBE2Q9NQ36 999 aa12.85□□□□□ -0.35
CDC27-216ENST00000574304 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.82□□□□□ -0.36
CDC27-216ENST00000574304 OTUD5Q96G74 571 aa12.81□□□□□ -0.36
CDC27-216ENST00000574304 PLCB2Q00722 1185 aa12.8□□□□□ -0.36
CDC27-216ENST00000574304 SLAIN1Q8ND83 568 aa12.74□□□□□ -0.37
CDC27-216ENST00000574304 TMEM92Q6UXU6 159 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms