RNA–Protein interactions for RNA: ENST00000572882.2

ABCC1-204, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 1 (best)

Gene ABCC1, Length 4,565 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-204ENST00000572882 TIMELESSQ9UNS1 1208 aa13.34□□□□□ -0.27
ABCC1-204ENST00000572882 SMARCA2P51531 1590 aa13.34□□□□□ -0.27
ABCC1-204ENST00000572882 GLIPR1L2Q4G1C9 344 aa13.33□□□□□ -0.28
ABCC1-204ENST00000572882 STAG3Q9UJ98 1225 aa13.33□□□□□ -0.28
ABCC1-204ENST00000572882 CCDC136Q96JN2 1154 aa13.33□□□□□ -0.28
ABCC1-204ENST00000572882 CHGAP10645 457 aaKnown RBP13.32□□□□□ -0.28
ABCC1-204ENST00000572882 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.32□□□□□ -0.28
ABCC1-204ENST00000572882 FAM9BQ8IZU0 186 aa13.32□□□□□ -0.28
ABCC1-204ENST00000572882 MROH2BQ7Z745 1585 aa13.32□□□□□ -0.28
ABCC1-204ENST00000572882 MIER1Q8N108 512 aa13.31□□□□□ -0.28
ABCC1-204ENST00000572882 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
ABCC1-204ENST00000572882 CARMIL1Q5VZK9 1371 aa13.3□□□□□ -0.28
ABCC1-204ENST00000572882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.3□□□□□ -0.281e-6■■■□□ 15.2
ABCC1-204ENST00000572882 CCDC88BA6NC98 1476 aa13.28□□□□□ -0.28
ABCC1-204ENST00000572882 KCNH8Q96L42 1107 aa13.28□□□□□ -0.28
ABCC1-204ENST00000572882 RRP7BPQ9NSQ0 103 aa13.28□□□□□ -0.28
ABCC1-204ENST00000572882 CFDP1Q9UEE9 299 aaPredicted RBP13.28□□□□□ -0.28
ABCC1-204ENST00000572882 HSP90AA1P07900 732 aaKnown RBP13.28□□□□□ -0.28
ABCC1-204ENST00000572882 BCL11AQ9H165 835 aa13.26□□□□□ -0.29
ABCC1-204ENST00000572882 CCNB3Q8WWL7 1395 aa13.26□□□□□ -0.29
ABCC1-204ENST00000572882 ARID4BQ4LE39 1312 aaPredicted RBP13.26□□□□□ -0.29
ABCC1-204ENST00000572882 VPS8Q8N3P4 1428 aa13.26□□□□□ -0.29
ABCC1-204ENST00000572882 CDCA8Q53HL2 280 aa13.26□□□□□ -0.29
ABCC1-204ENST00000572882 WDR43Q15061 677 aaKnown RBP eCLIP13.25□□□□□ -0.29
ABCC1-204ENST00000572882 PDS5BQ9NTI5 1447 aa13.25□□□□□ -0.29
ABCC1-204ENST00000572882 NBR1Q14596 966 aa13.25□□□□□ -0.29
ABCC1-204ENST00000572882 CUX2O14529 1486 aa13.25□□□□□ -0.29
ABCC1-204ENST00000572882 SOGA1O94964 1423 aa13.23□□□□□ -0.29
ABCC1-204ENST00000572882 KDM2AQ9Y2K7 1162 aa13.23□□□□□ -0.29
ABCC1-204ENST00000572882 TOP2AP11388 1531 aaKnown RBP13.23□□□□□ -0.29
ABCC1-204ENST00000572882 SLC24A1O60721 1099 aa13.22□□□□□ -0.29
ABCC1-204ENST00000572882 ANP32EQ9BTT0 268 aa13.18□□□□□ -0.3
ABCC1-204ENST00000572882 SALL2Q9Y467 1007 aaPredicted RBP13.16□□□□□ -0.3
ABCC1-204ENST00000572882 FMN1Q68DA7 1419 aa13.14□□□□□ -0.31
ABCC1-204ENST00000572882 DDRGK1Q96HY6 314 aa13.13□□□□□ -0.31
ABCC1-204ENST00000572882 IRX6P78412 446 aaPredicted RBP13.12□□□□□ -0.31
ABCC1-204ENST00000572882 SETD5Q9C0A6 1442 aa13.12□□□□□ -0.31
ABCC1-204ENST00000572882 CARD11Q9BXL7 1154 aa13.1□□□□□ -0.31
ABCC1-204ENST00000572882 ARHGAP35Q9NRY4 1499 aa13.1□□□□□ -0.31
ABCC1-204ENST00000572882 CFAP53Q96M91 514 aa13.1□□□□□ -0.31
ABCC1-204ENST00000572882 ABCC8Q09428 1581 aa13.09□□□□□ -0.31
ABCC1-204ENST00000572882 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
ABCC1-204ENST00000572882 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
ABCC1-204ENST00000572882 HIRIP3Q9BW71 556 aaPredicted RBP13.09□□□□□ -0.31
ABCC1-204ENST00000572882 CARMIL2Q6F5E8 1435 aa13.09□□□□□ -0.31
ABCC1-204ENST00000572882 KNSTRNQ9Y448 316 aa13.08□□□□□ -0.32
ABCC1-204ENST00000572882 AEBP2Q6ZN18 517 aaPredicted RBP13.08□□□□□ -0.32
ABCC1-204ENST00000572882 WIZO95785 1651 aa13.07□□□□□ -0.32
ABCC1-204ENST00000572882 RGL3Q3MIN7 710 aa13.07□□□□□ -0.32
ABCC1-204ENST00000572882 BECN1Q14457 450 aa13.07□□□□□ -0.32
ABCC1-204ENST00000572882 ATAD2BQ9ULI0 1458 aa13.07□□□□□ -0.32
ABCC1-204ENST00000572882 CCER2I3L3R5 266 aa13.05□□□□□ -0.32
ABCC1-204ENST00000572882 SIN3AQ96ST3 1273 aa13.05□□□□□ -0.32
ABCC1-204ENST00000572882 CYB5RLQ6IPT4 315 aa13.05□□□□□ -0.32
ABCC1-204ENST00000572882 SMARCA4P51532 1647 aa13.04□□□□□ -0.32
ABCC1-204ENST00000572882 PPM1GO15355 546 aaPredicted RBP13.04□□□□□ -0.32
ABCC1-204ENST00000572882 ARXQ96QS3 562 aa13.03□□□□□ -0.32
ABCC1-204ENST00000572882 RAPGEF2Q9Y4G8 1499 aa13.03□□□□□ -0.32
ABCC1-204ENST00000572882 PPP1R15AO75807 674 aaPredicted RBP13.03□□□□□ -0.32
ABCC1-204ENST00000572882 EIF4G1Q04637 1599 aaKnown RBP13.02□□□□□ -0.32
ABCC1-204ENST00000572882 MYH16Q9H6N6 1097 aa13.02□□□□□ -0.33
ABCC1-204ENST00000572882 C14orf37Q86TY3 774 aa13.02□□□□□ -0.33
ABCC1-204ENST00000572882 KANK1Q14678 1352 aa13.01□□□□□ -0.33
ABCC1-204ENST00000572882 SUPT16HQ9Y5B9 1047 aaKnown RBP13□□□□□ -0.33
ABCC1-204ENST00000572882 TRIM44Q96DX7 344 aaPredicted RBP13□□□□□ -0.33
ABCC1-204ENST00000572882 PPP4R2Q9NY27 417 aa13□□□□□ -0.33
ABCC1-204ENST00000572882 RSPH4AQ5TD94 716 aa12.99□□□□□ -0.33
ABCC1-204ENST00000572882 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
ABCC1-204ENST00000572882 ERICH6BQ5W0A0 696 aa12.98□□□□□ -0.33
ABCC1-204ENST00000572882 NUDCQ9Y266 331 aa12.98□□□□□ -0.33
ABCC1-204ENST00000572882 TMF1P82094 1093 aa12.98□□□□□ -0.33
ABCC1-204ENST00000572882 GOLGA6L22H0YM25 854 aa12.97□□□□□ -0.33
ABCC1-204ENST00000572882 TDRD9Q8NDG6 1382 aaKnown RBP12.96□□□□□ -0.33
ABCC1-204ENST00000572882 CHMP4BQ9H444 224 aaKnown RBP12.96□□□□□ -0.34
ABCC1-204ENST00000572882 MS4A1P11836 297 aa12.95□□□□□ -0.34
ABCC1-204ENST00000572882 RAB3GAP2Q9H2M9 1393 aa12.95□□□□□ -0.34
ABCC1-204ENST00000572882 PNNQ9H307 717 aaKnown RBP12.95□□□□□ -0.34
ABCC1-204ENST00000572882 ANKRD30AQ9BXX3 1397 aa12.94□□□□□ -0.34
ABCC1-204ENST00000572882 MLECQ14165 292 aa12.94□□□□□ -0.34
ABCC1-204ENST00000572882 EFCAB2Q5VUJ9 269 aa12.93□□□□□ -0.34
ABCC1-204ENST00000572882 HDGFP51858 240 aaKnown RBP12.93□□□□□ -0.34
ABCC1-204ENST00000572882 DCAF11Q8TEB1 546 aa12.93□□□□□ -0.34
ABCC1-204ENST00000572882 NOP58Q9Y2X3 529 aaKnown RBP12.93□□□□□ -0.34
ABCC1-204ENST00000572882 NCLP19338 710 aaKnown RBP12.91□□□□□ -0.34
ABCC1-204ENST00000572882 CCDC18Q5T9S5 1454 aa12.91□□□□□ -0.34
ABCC1-204ENST00000572882 PKD2Q13563 968 aa12.9□□□□□ -0.34
ABCC1-204ENST00000572882 MPHOSPH9Q99550 1183 aa12.9□□□□□ -0.34
ABCC1-204ENST00000572882 MAPK8IP3Q9UPT6 1336 aa12.9□□□□□ -0.34
ABCC1-204ENST00000572882 POGKQ9P215 609 aa12.89□□□□□ -0.35
ABCC1-204ENST00000572882 HSPA5P11021 654 aaKnown RBP12.88□□□□□ -0.35
ABCC1-204ENST00000572882 DNAJC5BQ9UF47 199 aa12.88□□□□□ -0.35
ABCC1-204ENST00000572882 TNNT2P45379 298 aaPredicted RBP12.86□□□□□ -0.35
ABCC1-204ENST00000572882 HAP1P54257 671 aaPredicted RBP12.85□□□□□ -0.35
ABCC1-204ENST00000572882 NUP155O75694 1391 aa12.85□□□□□ -0.35
ABCC1-204ENST00000572882 RALBP1Q15311 655 aa12.85□□□□□ -0.35
ABCC1-204ENST00000572882 FANCD2Q9BXW9 1451 aa12.84□□□□□ -0.35
ABCC1-204ENST00000572882 FTSJ3Q8IY81 847 aaKnown RBP12.84□□□□□ -0.35
ABCC1-204ENST00000572882 FHOD3Q2V2M9 1422 aa12.84□□□□□ -0.35
ABCC1-204ENST00000572882 SENP3Q9H4L4 574 aaPredicted RBP12.83□□□□□ -0.35
ABCC1-204ENST00000572882 LAS1LQ9Y4W2 734 aaKnown RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms