RNA–Protein interactions for RNA: ENST00000572433.5

ITGAE-208, Transcript of integrin subunit alpha E, humanhuman

TSL 2

Gene ITGAE, Length 731 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-208ENST00000572433 TAOK2Q9UL54 1235 aa19.19■□□□□ 0.66
ITGAE-208ENST00000572433 CFAP44Q96MT7 982 aa19.18■□□□□ 0.66
ITGAE-208ENST00000572433 RASEFQ8IZ41 740 aa19.16■□□□□ 0.66
ITGAE-208ENST00000572433 RNF25Q96BH1 459 aaPredicted RBP19.16■□□□□ 0.66
ITGAE-208ENST00000572433 HS6ST3Q8IZP7 471 aa19.14■□□□□ 0.65
ITGAE-208ENST00000572433 VSIG10Q8N0Z9 540 aa19.14■□□□□ 0.65
ITGAE-208ENST00000572433 SPRYD3Q8NCJ5 442 aa19.14■□□□□ 0.65
ITGAE-208ENST00000572433 RIOK3O14730 519 aaKnown RBP19.13■□□□□ 0.65
ITGAE-208ENST00000572433 CHRM1P11229 460 aaPredicted RBP19.1■□□□□ 0.65
ITGAE-208ENST00000572433 CHADLQ6NUI6 762 aa19.03■□□□□ 0.64
ITGAE-208ENST00000572433 VGFO15240 615 aaPredicted RBP19.01■□□□□ 0.63
ITGAE-208ENST00000572433 DNAJC5Q9H3Z4 198 aa19■□□□□ 0.63
ITGAE-208ENST00000572433 FARP1Q9Y4F1 1045 aaPredicted RBP18.97■□□□□ 0.63
ITGAE-208ENST00000572433 PYGBP11216 843 aa18.95■□□□□ 0.62
ITGAE-208ENST00000572433 STK25O00506 426 aa18.92■□□□□ 0.62
ITGAE-208ENST00000572433 PRKAR2AP13861 404 aaKnown RBP18.91■□□□□ 0.62
ITGAE-208ENST00000572433 SGIP1Q9BQI5 828 aa18.9■□□□□ 0.62
ITGAE-208ENST00000572433 TSPYL2Q9H2G4 693 aaPredicted RBP18.88■□□□□ 0.61
ITGAE-208ENST00000572433 FXR2P51116 673 aaKnown RBP eCLIP18.86■□□□□ 0.61
ITGAE-208ENST00000572433 TSHZ2Q9NRE2 1034 aa18.86■□□□□ 0.61
ITGAE-208ENST00000572433 KDM2AQ9Y2K7 1162 aa18.86■□□□□ 0.61
ITGAE-208ENST00000572433 BCANQ96GW7 911 aa18.82■□□□□ 0.6
ITGAE-208ENST00000572433 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.81■□□□□ 0.6
ITGAE-208ENST00000572433 ZFP91Q96JP5 570 aaPredicted RBP18.81■□□□□ 0.6
ITGAE-208ENST00000572433 NKX1-1Q15270 411 aaPredicted RBP18.8■□□□□ 0.6
ITGAE-208ENST00000572433 BCL11BQ9C0K0 894 aaPredicted RBP18.79■□□□□ 0.6
ITGAE-208ENST00000572433 STK24Q9Y6E0 443 aa18.79■□□□□ 0.6
ITGAE-208ENST00000572433 ZNF467Q7Z7K2 595 aaPredicted RBP18.78■□□□□ 0.6
ITGAE-208ENST00000572433 CHRDL2Q6WN34 429 aa18.77■□□□□ 0.6
ITGAE-208ENST00000572433 GTPBP6O43824 516 aaPredicted RBP18.72■□□□□ 0.59
ITGAE-208ENST00000572433 PAK3O75914 559 aaPredicted RBP18.72■□□□□ 0.59
ITGAE-208ENST00000572433 RYDENQ9NUL5 291 aaKnown RBP18.71■□□□□ 0.59
ITGAE-208ENST00000572433 CCDC61Q9Y6R9 512 aa18.69■□□□□ 0.58
ITGAE-208ENST00000572433 PIP4P2Q8N4L2 257 aa18.68■□□□□ 0.58
ITGAE-208ENST00000572433 PDAP1Q13442 181 aaKnown RBP18.65■□□□□ 0.58
ITGAE-208ENST00000572433 ZNF579Q8NAF0 562 aaKnown RBP18.61■□□□□ 0.57
ITGAE-208ENST00000572433 PCDHB8Q9UN66 801 aa18.59■□□□□ 0.57
ITGAE-208ENST00000572433 PCDHB13Q9Y5F0 798 aa18.59■□□□□ 0.57
ITGAE-208ENST00000572433 PSEN1P49768 467 aa18.52■□□□□ 0.56
ITGAE-208ENST00000572433 KIF12Q96FN5 646 aa18.47■□□□□ 0.55
ITGAE-208ENST00000572433 MAP3K13O43283 966 aa18.45■□□□□ 0.54
ITGAE-208ENST00000572433 IFNL1Q8IU54 200 aa18.45■□□□□ 0.54
ITGAE-208ENST00000572433 ZRANB1Q9UGI0 708 aa18.43■□□□□ 0.54
ITGAE-208ENST00000572433 CD44P16070 742 aaKnown RBP18.42■□□□□ 0.54
ITGAE-208ENST00000572433 NBR1Q14596 966 aa18.35■□□□□ 0.53
ITGAE-208ENST00000572433 MFRPQ9BY79 579 aa18.31■□□□□ 0.52
ITGAE-208ENST00000572433 PHF12Q96QT6 1004 aa18.29■□□□□ 0.52
ITGAE-208ENST00000572433 CABP2Q9NPB3 220 aa18.28■□□□□ 0.52
ITGAE-208ENST00000572433 SOX12O15370 315 aa18.25■□□□□ 0.51
ITGAE-208ENST00000572433 EFCAB3Q8N7B9 438 aa18.25■□□□□ 0.51
ITGAE-208ENST00000572433 NLRP6P59044 892 aa18.24■□□□□ 0.51
ITGAE-208ENST00000572433 C19orf67A6NJJ6 358 aa18.19■□□□□ 0.5
ITGAE-208ENST00000572433 PRKCSHP14314 528 aaPredicted RBP18.18■□□□□ 0.5
ITGAE-208ENST00000572433 FBXO22Q8NEZ5 403 aa18.17■□□□□ 0.5
ITGAE-208ENST00000572433 TPRNQ4KMQ1 711 aa18.16■□□□□ 0.5
ITGAE-208ENST00000572433 WDR70Q9NW82 654 aa18.15■□□□□ 0.5
ITGAE-208ENST00000572433 PHF8Q9UPP1 1060 aa18.15■□□□□ 0.5
ITGAE-208ENST00000572433 CADPS2Q86UW7 1296 aa18.14■□□□□ 0.49
ITGAE-208ENST00000572433 P3H3Q8IVL6 736 aa18.14■□□□□ 0.49
ITGAE-208ENST00000572433 GOLGA2Q08379 1002 aa18.12■□□□□ 0.49
ITGAE-208ENST00000572433 TMEM106CQ9BVX2 250 aa18.12■□□□□ 0.49
ITGAE-208ENST00000572433 MS4A3Q96HJ5 214 aa18.11■□□□□ 0.49
ITGAE-208ENST00000572433 PPP1R37O75864 691 aa18.08■□□□□ 0.48
ITGAE-208ENST00000572433 MKRN3Q13064 507 aaKnown RBP18.01■□□□□ 0.47
ITGAE-208ENST00000572433 TRPC6Q9Y210 931 aa18.01■□□□□ 0.47
ITGAE-208ENST00000572433 TIE1P35590 1138 aa18■□□□□ 0.47
ITGAE-208ENST00000572433 MS4A4AQ96JQ5 239 aa17.96■□□□□ 0.47
ITGAE-208ENST00000572433 KCNV2Q8TDN2 545 aa17.95■□□□□ 0.46
ITGAE-208ENST00000572433 TTLL13PA6NNM8 815 aa17.92■□□□□ 0.46
ITGAE-208ENST00000572433 CLCN6P51797 869 aa17.91■□□□□ 0.46
ITGAE-208ENST00000572433 HAX1O00165 279 aa17.9■□□□□ 0.46
ITGAE-208ENST00000572433 BMP2KQ9NSY1 1161 aaPredicted RBP17.87■□□□□ 0.45
ITGAE-208ENST00000572433 PDE4AP27815 886 aa17.84■□□□□ 0.45
ITGAE-208ENST00000572433 E2F4Q16254 413 aa17.84■□□□□ 0.45
ITGAE-208ENST00000572433 GALR2O43603 387 aaPredicted RBP17.83■□□□□ 0.44
ITGAE-208ENST00000572433 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.82■□□□□ 0.44
ITGAE-208ENST00000572433 ARHGEF1Q92888 912 aaKnown RBP17.81■□□□□ 0.44
ITGAE-208ENST00000572433 TRIM35Q9UPQ4 493 aa17.81■□□□□ 0.44
ITGAE-208ENST00000572433 NCKAP5LQ9HCH0 1330 aa17.8■□□□□ 0.44
ITGAE-208ENST00000572433 ILDR1Q86SU0 546 aaPredicted RBP17.79■□□□□ 0.44
ITGAE-208ENST00000572433 LARP6Q9BRS8 491 aaKnown RBP17.79■□□□□ 0.44
ITGAE-208ENST00000572433 CRISPLD2Q9H0B8 497 aa17.77■□□□□ 0.44
ITGAE-208ENST00000572433 MFSD10Q14728 455 aa17.75■□□□□ 0.43
ITGAE-208ENST00000572433 DDX27Q96GQ7 796 aaKnown RBP17.72■□□□□ 0.43
ITGAE-208ENST00000572433 TULP1O00294 542 aaPredicted RBP17.71■□□□□ 0.43
ITGAE-208ENST00000572433 EVX2Q03828 476 aa17.71■□□□□ 0.43
ITGAE-208ENST00000572433 ATN1P54259 1190 aaPredicted RBP17.64■□□□□ 0.41
ITGAE-208ENST00000572433 LMOD2Q6P5Q4 547 aa17.63■□□□□ 0.41
ITGAE-208ENST00000572433 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.63■□□□□ 0.41
ITGAE-208ENST00000572433 ATMINO43313 823 aaPredicted RBP17.62■□□□□ 0.41
ITGAE-208ENST00000572433 IER5LQ5T953 404 aa17.61■□□□□ 0.41
ITGAE-208ENST00000572433 ASTLQ6HA08 431 aaPredicted RBP17.61■□□□□ 0.41
ITGAE-208ENST00000572433 DPY19L2Q6NUT2 758 aa17.59■□□□□ 0.41
ITGAE-208ENST00000572433 GPHNQ9NQX3 736 aaPredicted RBP17.59■□□□□ 0.41
ITGAE-208ENST00000572433 ARIH1Q9Y4X5 557 aaPredicted RBP17.59■□□□□ 0.41
ITGAE-208ENST00000572433 CAMK2BQ13554 666 aa17.58■□□□□ 0.4
ITGAE-208ENST00000572433 PDCD7Q8N8D1 485 aaKnown RBP17.58■□□□□ 0.4
ITGAE-208ENST00000572433 MICALL2Q8IY33 904 aa17.57■□□□□ 0.4
ITGAE-208ENST00000572433 OCEL1Q9H607 264 aa17.57■□□□□ 0.4
ITGAE-208ENST00000572433 IRX5P78411 483 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms