RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 CLCN6P51797 869 aa17.52■□□□□ 0.4
CDC27-212ENST00000570818 ZNF579Q8NAF0 562 aaKnown RBP17.52■□□□□ 0.4
CDC27-212ENST00000570818 SP7Q8TDD2 431 aaPredicted RBP17.51■□□□□ 0.39
CDC27-212ENST00000570818 CIZ1Q9ULV3 898 aaPredicted RBP17.49■□□□□ 0.39
CDC27-212ENST00000570818 CCDC61Q9Y6R9 512 aa17.47■□□□□ 0.39
CDC27-212ENST00000570818 PHF12Q96QT6 1004 aa17.4■□□□□ 0.38
CDC27-212ENST00000570818 TRIM41Q8WV44 630 aa17.37■□□□□ 0.37
CDC27-212ENST00000570818 GABBR2O75899 941 aa17.32■□□□□ 0.36
CDC27-212ENST00000570818 PYGBP11216 843 aa17.31■□□□□ 0.36
CDC27-212ENST00000570818 KIF12Q96FN5 646 aa17.31■□□□□ 0.36
CDC27-212ENST00000570818 SGIP1Q9BQI5 828 aa17.29■□□□□ 0.36
CDC27-212ENST00000570818 CHRM1P11229 460 aaPredicted RBP17.27■□□□□ 0.36
CDC27-212ENST00000570818 MAP3K13O43283 966 aa17.26■□□□□ 0.35
CDC27-212ENST00000570818 PCDHB13Q9Y5F0 798 aa17.25■□□□□ 0.35
CDC27-212ENST00000570818 MS4A3Q96HJ5 214 aa17.21■□□□□ 0.35
CDC27-212ENST00000570818 GALR2O43603 387 aaPredicted RBP17.19■□□□□ 0.34
CDC27-212ENST00000570818 ZNF467Q7Z7K2 595 aaPredicted RBP17.18■□□□□ 0.34
CDC27-212ENST00000570818 ECM2O94769 699 aaPredicted RBP17.16■□□□□ 0.34
CDC27-212ENST00000570818 DCBLD2Q96PD2 775 aa17.14■□□□□ 0.33
CDC27-212ENST00000570818 PKD2Q13563 968 aa17.13■□□□□ 0.33
CDC27-212ENST00000570818 IFNL1Q8IU54 200 aa17.12■□□□□ 0.33
CDC27-212ENST00000570818 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
CDC27-212ENST00000570818 PCDHB8Q9UN66 801 aa17.06■□□□□ 0.32
CDC27-212ENST00000570818 TAOK2Q9UL54 1235 aa17.05■□□□□ 0.32
CDC27-212ENST00000570818 TIE1P35590 1138 aa17.03■□□□□ 0.32
CDC27-212ENST00000570818 RIOK3O14730 519 aaKnown RBP17.02■□□□□ 0.32
CDC27-212ENST00000570818 PDAP1Q13442 181 aaKnown RBP16.98■□□□□ 0.31
CDC27-212ENST00000570818 TRPC6Q9Y210 931 aa16.95■□□□□ 0.3
CDC27-212ENST00000570818 PSEN1P49768 467 aa16.94■□□□□ 0.3
CDC27-212ENST00000570818 ASTLQ6HA08 431 aaPredicted RBP16.94■□□□□ 0.3
CDC27-212ENST00000570818 VGFO15240 615 aaPredicted RBP16.93■□□□□ 0.3
CDC27-212ENST00000570818 RNF25Q96BH1 459 aaPredicted RBP16.93■□□□□ 0.3
CDC27-212ENST00000570818 TMEM106CQ9BVX2 250 aa16.93■□□□□ 0.3
CDC27-212ENST00000570818 BMP2KQ9NSY1 1161 aaPredicted RBP16.93■□□□□ 0.3
CDC27-212ENST00000570818 RGL2O15211 777 aa16.91■□□□□ 0.3
CDC27-212ENST00000570818 ATMINO43313 823 aaPredicted RBP16.91■□□□□ 0.3
CDC27-212ENST00000570818 TTLL13PA6NNM8 815 aa16.9■□□□□ 0.3
CDC27-212ENST00000570818 RTN4Q9NQC3 1192 aaKnown RBP16.9■□□□□ 0.3
CDC27-212ENST00000570818 POTEIP0CG38 1075 aa16.87■□□□□ 0.29
CDC27-212ENST00000570818 GOLGA2Q08379 1002 aa16.85■□□□□ 0.29
CDC27-212ENST00000570818 ATN1P54259 1190 aaPredicted RBP16.84■□□□□ 0.29
CDC27-212ENST00000570818 TRIM35Q9UPQ4 493 aa16.82■□□□□ 0.28
CDC27-212ENST00000570818 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.8■□□□□ 0.28
CDC27-212ENST00000570818 ZFP91Q96JP5 570 aaPredicted RBP16.8■□□□□ 0.28
CDC27-212ENST00000570818 SLC39A7Q92504 469 aa16.79■□□□□ 0.28
CDC27-212ENST00000570818 DCAF8L2P0C7V8 631 aa16.78■□□□□ 0.28
CDC27-212ENST00000570818 C7P10643 843 aa16.75■□□□□ 0.27
CDC27-212ENST00000570818 STK25O00506 426 aa16.74■□□□□ 0.27
CDC27-212ENST00000570818 IER5LQ5T953 404 aa16.74■□□□□ 0.27
CDC27-212ENST00000570818 MKRN3Q13064 507 aaKnown RBP16.73■□□□□ 0.27
CDC27-212ENST00000570818 PELP1Q8IZL8 1130 aaKnown RBP16.73■□□□□ 0.27
CDC27-212ENST00000570818 CABP2Q9NPB3 220 aa16.73■□□□□ 0.27
CDC27-212ENST00000570818 BCL11BQ9C0K0 894 aaPredicted RBP16.71■□□□□ 0.27
CDC27-212ENST00000570818 STK24Q9Y6E0 443 aa16.71■□□□□ 0.27
CDC27-212ENST00000570818 METRNQ9UJH8 293 aa16.7■□□□□ 0.26
CDC27-212ENST00000570818 SEC24BO95487 1268 aa16.67■□□□□ 0.26
CDC27-212ENST00000570818 CHGAP10645 457 aaKnown RBP16.63■□□□□ 0.25
CDC27-212ENST00000570818 HS6ST3Q8IZP7 471 aa16.62■□□□□ 0.25
CDC27-212ENST00000570818 PLCG2P16885 1265 aa16.6■□□□□ 0.25
CDC27-212ENST00000570818 EFCAB3Q8N7B9 438 aa16.58■□□□□ 0.24
CDC27-212ENST00000570818 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.57■□□□□ 0.247e-8■■■■■ 28.7
CDC27-212ENST00000570818 SOX12O15370 315 aa16.56■□□□□ 0.24
CDC27-212ENST00000570818 OCEL1Q9H607 264 aa16.56■□□□□ 0.24
CDC27-212ENST00000570818 IRX5P78411 483 aaPredicted RBP16.54■□□□□ 0.24
CDC27-212ENST00000570818 COLQQ9Y215 455 aaPredicted RBP16.49■□□□□ 0.23
CDC27-212ENST00000570818 NLRP6P59044 892 aa16.46■□□□□ 0.23
CDC27-212ENST00000570818 LHX8Q68G74 356 aa16.45■□□□□ 0.22
CDC27-212ENST00000570818 POTEFA5A3E0 1075 aa16.44■□□□□ 0.22
CDC27-212ENST00000570818 DNAJC5Q9H3Z4 198 aa16.44■□□□□ 0.22
CDC27-212ENST00000570818 ILDR1Q86SU0 546 aaPredicted RBP16.43■□□□□ 0.22
CDC27-212ENST00000570818 RYDENQ9NUL5 291 aaKnown RBP16.42■□□□□ 0.22
CDC27-212ENST00000570818 PDCD7Q8N8D1 485 aaKnown RBP16.41■□□□□ 0.22
CDC27-212ENST00000570818 PHF8Q9UPP1 1060 aa16.41■□□□□ 0.22
CDC27-212ENST00000570818 G3V3G9 751 aa16.4■□□□□ 0.22
CDC27-212ENST00000570818 L3MBTL3Q96JM7 780 aaPredicted RBP16.4■□□□□ 0.22
CDC27-212ENST00000570818 MAMSTRQ6ZN01 415 aa16.38■□□□□ 0.21
CDC27-212ENST00000570818 MFRPQ9BY79 579 aa16.37■□□□□ 0.21
CDC27-212ENST00000570818 BBXQ8WY36 941 aaPredicted RBP16.34■□□□□ 0.21
CDC27-212ENST00000570818 FBXO22Q8NEZ5 403 aa16.33■□□□□ 0.2
CDC27-212ENST00000570818 POTEB2H3BUK9 544 aa16.32■□□□□ 0.2
CDC27-212ENST00000570818 SCUBE2Q9NQ36 999 aa16.32■□□□□ 0.2
CDC27-212ENST00000570818 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.31■□□□□ 0.2
CDC27-212ENST00000570818 NKX1-1Q15270 411 aaPredicted RBP16.28■□□□□ 0.2
CDC27-212ENST00000570818 DPY19L2Q6NUT2 758 aa16.28■□□□□ 0.2
CDC27-212ENST00000570818 MS4A4AQ96JQ5 239 aa16.28■□□□□ 0.2
CDC27-212ENST00000570818 BOLA1Q9Y3E2 137 aa16.27■□□□□ 0.2
CDC27-212ENST00000570818 C3orf67Q6ZVT6 689 aa16.25■□□□□ 0.19
CDC27-212ENST00000570818 POTEJP0CG39 1038 aa16.21■□□□□ 0.19
CDC27-212ENST00000570818 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.21■□□□□ 0.19
CDC27-212ENST00000570818 GTPBP6O43824 516 aaPredicted RBP16.16■□□□□ 0.18
CDC27-212ENST00000570818 MICALL2Q8IY33 904 aa16.16■□□□□ 0.18
CDC27-212ENST00000570818 OTUD5Q96G74 571 aa16.15■□□□□ 0.18
CDC27-212ENST00000570818 TMEM121BQ9BXQ6 578 aaPredicted RBP16.15■□□□□ 0.18
CDC27-212ENST00000570818 SPRYD3Q8NCJ5 442 aa16.14■□□□□ 0.17
CDC27-212ENST00000570818 PPP1R37O75864 691 aa16.1■□□□□ 0.17
CDC27-212ENST00000570818 SLAIN1Q8ND83 568 aa16.09■□□□□ 0.17
CDC27-212ENST00000570818 PAXIP1Q6ZW49 1069 aaPredicted RBP16.07■□□□□ 0.16
CDC27-212ENST00000570818 CFAP44Q96MT7 982 aa16.06■□□□□ 0.16
CDC27-212ENST00000570818 TMC2Q8TDI7 906 aa15.95■□□□□ 0.14
CDC27-212ENST00000570818 SNPHO15079 494 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms