RNA–Protein interactions for RNA: ENST00000570103.5

CFDP1-209, Transcript of craniofacial development protein 1, humanhuman

TSL 2

Gene CFDP1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-209ENST00000570103 ATMINO43313 823 aaPredicted RBP13.94□□□□□ -0.18
CFDP1-209ENST00000570103 C7P10643 843 aa13.94□□□□□ -0.18
CFDP1-209ENST00000570103 SLC39A7Q92504 469 aa13.94□□□□□ -0.18
CFDP1-209ENST00000570103 POTEJP0CG39 1038 aa13.91□□□□□ -0.18
CFDP1-209ENST00000570103 MAMSTRQ6ZN01 415 aa13.88□□□□□ -0.19
CFDP1-209ENST00000570103 PCDH10Q9P2E7 1040 aa13.88□□□□□ -0.19
CFDP1-209ENST00000570103 TSPYL2Q9H2G4 693 aaPredicted RBP13.81□□□□□ -0.2
CFDP1-209ENST00000570103 ATN1P54259 1190 aaPredicted RBP13.79□□□□□ -0.2
CFDP1-209ENST00000570103 CCDC61Q9Y6R9 512 aa13.79□□□□□ -0.2
CFDP1-209ENST00000570103 LCE2DQ5TA82 110 aaPredicted RBP13.76□□□□□ -0.21
CFDP1-209ENST00000570103 SCUBE2Q9NQ36 999 aa13.76□□□□□ -0.21
CFDP1-209ENST00000570103 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
CFDP1-209ENST00000570103 KIF12Q96FN5 646 aa13.74□□□□□ -0.21
CFDP1-209ENST00000570103 FAM163AQ96GL9 167 aaPredicted RBP13.73□□□□□ -0.21
CFDP1-209ENST00000570103 PROM2Q8N271 834 aa13.72□□□□□ -0.21
CFDP1-209ENST00000570103 POTEFA5A3E0 1075 aa13.69□□□□□ -0.22
CFDP1-209ENST00000570103 BMP2KQ9NSY1 1161 aaPredicted RBP13.69□□□□□ -0.22
CFDP1-209ENST00000570103 TRPC6Q9Y210 931 aa13.65□□□□□ -0.22
CFDP1-209ENST00000570103 TIE1P35590 1138 aa13.63□□□□□ -0.23
CFDP1-209ENST00000570103 MAP3K13O43283 966 aa13.62□□□□□ -0.23
CFDP1-209ENST00000570103 RASEFQ8IZ41 740 aa13.56□□□□□ -0.24
CFDP1-209ENST00000570103 PLEKHG5O94827 1062 aa13.55□□□□□ -0.24
CFDP1-209ENST00000570103 COLQQ9Y215 455 aaPredicted RBP13.55□□□□□ -0.24
CFDP1-209ENST00000570103 TTLL13PA6NNM8 815 aa13.54□□□□□ -0.24
CFDP1-209ENST00000570103 SEC24BO95487 1268 aa13.53□□□□□ -0.24
CFDP1-209ENST00000570103 MIER1Q8N108 512 aa13.52□□□□□ -0.25
CFDP1-209ENST00000570103 IER5LQ5T953 404 aa13.47□□□□□ -0.25
CFDP1-209ENST00000570103 CDAN1Q8IWY9 1227 aa13.45□□□□□ -0.26
CFDP1-209ENST00000570103 SGIP1Q9BQI5 828 aa13.45□□□□□ -0.26
CFDP1-209ENST00000570103 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
CFDP1-209ENST00000570103 PCDHB13Q9Y5F0 798 aa13.42□□□□□ -0.26
CFDP1-209ENST00000570103 SLAIN1Q8ND83 568 aa13.37□□□□□ -0.27
CFDP1-209ENST00000570103 PLCD3Q8N3E9 789 aa13.35□□□□□ -0.27
CFDP1-209ENST00000570103 ST18O60284 1047 aa13.34□□□□□ -0.27
CFDP1-209ENST00000570103 IFNL1Q8IU54 200 aa13.33□□□□□ -0.28
CFDP1-209ENST00000570103 NUBP1P53384 320 aa13.32□□□□□ -0.28
CFDP1-209ENST00000570103 TMEM106CQ9BVX2 250 aa13.3□□□□□ -0.28
CFDP1-209ENST00000570103 ZBTB47Q9UFB7 747 aaPredicted RBP13.3□□□□□ -0.28
CFDP1-209ENST00000570103 PLCG2P16885 1265 aa13.28□□□□□ -0.28
CFDP1-209ENST00000570103 IRX5P78411 483 aaPredicted RBP13.24□□□□□ -0.29
CFDP1-209ENST00000570103 FAM212AQ96EL1 285 aa13.23□□□□□ -0.29
CFDP1-209ENST00000570103 TMEM121BQ9BXQ6 578 aaPredicted RBP13.18□□□□□ -0.3
CFDP1-209ENST00000570103 OCEL1Q9H607 264 aa13.17□□□□□ -0.3
CFDP1-209ENST00000570103 MMRN1Q13201 1228 aa13.15□□□□□ -0.3
CFDP1-209ENST00000570103 SNPHO15079 494 aa13.14□□□□□ -0.31
CFDP1-209ENST00000570103 SPNS2Q8IVW8 549 aa13.14□□□□□ -0.31
CFDP1-209ENST00000570103 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.11□□□□□ -0.31
CFDP1-209ENST00000570103 MARVELD3Q96A59 401 aa13.06□□□□□ -0.32
CFDP1-209ENST00000570103 PYGBP11216 843 aa13.05□□□□□ -0.32
CFDP1-209ENST00000570103 DCAF8Q5TAQ9 597 aa13.05□□□□□ -0.32
CFDP1-209ENST00000570103 PCDHB8Q9UN66 801 aa13.03□□□□□ -0.32
CFDP1-209ENST00000570103 PDCD7Q8N8D1 485 aaKnown RBP12.97□□□□□ -0.33
CFDP1-209ENST00000570103 C3orf67Q6ZVT6 689 aa12.94□□□□□ -0.34
CFDP1-209ENST00000570103 EMP3P54852 163 aa12.93□□□□□ -0.34
CFDP1-209ENST00000570103 L3MBTL3Q96JM7 780 aaPredicted RBP12.92□□□□□ -0.34
CFDP1-209ENST00000570103 FKBP8Q14318 412 aa12.89□□□□□ -0.35
CFDP1-209ENST00000570103 GOLGA2Q08379 1002 aa12.88□□□□□ -0.35
CFDP1-209ENST00000570103 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
CFDP1-209ENST00000570103 ZNF467Q7Z7K2 595 aaPredicted RBP12.88□□□□□ -0.35
CFDP1-209ENST00000570103 POTEB3A0JP26 581 aa12.86□□□□□ -0.35
CFDP1-209ENST00000570103 POTEBQ6S5H4 581 aa12.86□□□□□ -0.35
CFDP1-209ENST00000570103 HS3ST6Q96QI5 342 aa12.86□□□□□ -0.35
CFDP1-209ENST00000570103 KRTAP3-3Q9BYR6 98 aa12.86□□□□□ -0.35
CFDP1-209ENST00000570103 KRTAP3-2Q9BYR7 98 aa12.86□□□□□ -0.35
CFDP1-209ENST00000570103 FAM205CA6NFA0 338 aa12.83□□□□□ -0.36
CFDP1-209ENST00000570103 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.363e-12■■□□□ 11.4
CFDP1-209ENST00000570103 GSE1Q14687 1217 aa12.82□□□□□ -0.36
CFDP1-209ENST00000570103 FBXO3Q9UK99 471 aa12.8□□□□□ -0.36
CFDP1-209ENST00000570103 CHRM1P11229 460 aaPredicted RBP12.79□□□□□ -0.36
CFDP1-209ENST00000570103 PSEN1P49768 467 aa12.78□□□□□ -0.36
CFDP1-209ENST00000570103 ILDR1Q86SU0 546 aaPredicted RBP12.77□□□□□ -0.37
CFDP1-209ENST00000570103 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
CFDP1-209ENST00000570103 DPY19L2Q6NUT2 758 aa12.7□□□□□ -0.38
CFDP1-209ENST00000570103 HOXB3P14651 431 aaPredicted RBP12.69□□□□□ -0.38
CFDP1-209ENST00000570103 PDAP1Q13442 181 aaKnown RBP12.67□□□□□ -0.38
CFDP1-209ENST00000570103 VASPP50552 380 aaPredicted RBP12.66□□□□□ -0.38
CFDP1-209ENST00000570103 BOLA1Q9Y3E2 137 aa12.66□□□□□ -0.38
CFDP1-209ENST00000570103 G3V3G9 751 aa12.65□□□□□ -0.38
CFDP1-209ENST00000570103 HOXB1P14653 301 aaPredicted RBP12.64□□□□□ -0.39
CFDP1-209ENST00000570103 CABP2Q9NPB3 220 aa12.62□□□□□ -0.39
CFDP1-209ENST00000570103 ZNF710Q8N1W2 664 aa12.61□□□□□ -0.39
CFDP1-209ENST00000570103 ERBB3P21860 1342 aa12.59□□□□□ -0.39
CFDP1-209ENST00000570103 DOK7Q18PE1 504 aa12.58□□□□□ -0.4
CFDP1-209ENST00000570103 RNF166Q96A37 237 aaPredicted RBP12.54□□□□□ -0.4
CFDP1-209ENST00000570103 RIMBP2O15034 1052 aa12.5□□□□□ -0.41
CFDP1-209ENST00000570103 VARS2Q5ST30 1063 aaKnown RBP12.48□□□□□ -0.41
CFDP1-209ENST00000570103 CIZ1Q9ULV3 898 aaPredicted RBP12.47□□□□□ -0.41
CFDP1-209ENST00000570103 SPOCK2Q92563 424 aa12.46□□□□□ -0.41
CFDP1-209ENST00000570103 MYT1LQ9UL68 1186 aa12.46□□□□□ -0.41
CFDP1-209ENST00000570103 ZSWIM6Q9HCJ5 1215 aa12.44□□□□□ -0.42
CFDP1-209ENST00000570103 ZNF687Q8N1G0 1237 aa12.42□□□□□ -0.42
CFDP1-209ENST00000570103 EFCAB3Q8N7B9 438 aa12.41□□□□□ -0.42
CFDP1-209ENST00000570103 TMEM92Q6UXU6 159 aa12.39□□□□□ -0.43
CFDP1-209ENST00000570103 IFNLR1Q8IU57 520 aaPredicted RBP12.39□□□□□ -0.43
CFDP1-209ENST00000570103 MICALL2Q8IY33 904 aa12.38□□□□□ -0.43
CFDP1-209ENST00000570103 GPR153Q6NV75 609 aa12.37□□□□□ -0.43
CFDP1-209ENST00000570103 PTGER2P43116 358 aa12.36□□□□□ -0.43
CFDP1-209ENST00000570103 TRIM41Q8WV44 630 aa12.29□□□□□ -0.44
CFDP1-209ENST00000570103 SOX12O15370 315 aa12.27□□□□□ -0.45
CFDP1-209ENST00000570103 ARSIQ5FYB1 569 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms