RNA–Protein interactions for RNA: ENST00000569796.1

E4F1-209, Transcript of E4F transcription factor 1, humanhuman

TSL 2

Gene E4F1, Length 5,931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-209ENST00000569796 KCNH8Q96L42 1107 aa22.52■■□□□ 1.19
E4F1-209ENST00000569796 CDK11BP21127 795 aaKnown RBP22.5■■□□□ 1.19
E4F1-209ENST00000569796 HIRIP3Q9BW71 556 aaPredicted RBP22.47■■□□□ 1.19
E4F1-209ENST00000569796 TNNT2P45379 298 aaPredicted RBP22.46■■□□□ 1.19
E4F1-209ENST00000569796 HAP1P54257 671 aaPredicted RBP22.46■■□□□ 1.19
E4F1-209ENST00000569796 RRP7BPQ9NSQ0 103 aa22.44■■□□□ 1.18
E4F1-209ENST00000569796 IRX6P78412 446 aaPredicted RBP22.44■■□□□ 1.18
E4F1-209ENST00000569796 ARID4BQ4LE39 1312 aaPredicted RBP22.41■■□□□ 1.18
E4F1-209ENST00000569796 TRIM44Q96DX7 344 aaPredicted RBP22.39■■□□□ 1.18
E4F1-209ENST00000569796 RGL3Q3MIN7 710 aa22.36■■□□□ 1.17
E4F1-209ENST00000569796 EIF4G2P78344 907 aaKnown RBP eCLIP22.35■■□□□ 1.17
E4F1-209ENST00000569796 PLEKHD1A6NEE1 506 aa22.32■■□□□ 1.16
E4F1-209ENST00000569796 PPM1GO15355 546 aaPredicted RBP22.32■■□□□ 1.16
E4F1-209ENST00000569796 NCLP19338 710 aaKnown RBP22.29■■□□□ 1.16
E4F1-209ENST00000569796 SENP3-EIF4A1A0A087X0R7 540 aa22.26■■□□□ 1.15
E4F1-209ENST00000569796 ANP32EQ9BTT0 268 aa22.26■■□□□ 1.15
E4F1-209ENST00000569796 CFAP53Q96M91 514 aa22.26■■□□□ 1.15
E4F1-209ENST00000569796 DDRGK1Q96HY6 314 aa22.25■■□□□ 1.15
E4F1-209ENST00000569796 DCAF1Q9Y4B6 1507 aa22.25■■□□□ 1.15
E4F1-209ENST00000569796 CLIP1P30622 1438 aa22.24■■□□□ 1.15
E4F1-209ENST00000569796 BECN1Q14457 450 aa22.24■■□□□ 1.15
E4F1-209ENST00000569796 LMOD2Q6P5Q4 547 aa22.23■■□□□ 1.15
E4F1-209ENST00000569796 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
E4F1-209ENST00000569796 TULP1O00294 542 aaPredicted RBP22.19■■□□□ 1.14
E4F1-209ENST00000569796 MIER1Q8N108 512 aa22.19■■□□□ 1.14
E4F1-209ENST00000569796 NAP1L5Q96NT1 182 aaPredicted RBP22.18■■□□□ 1.14
E4F1-209ENST00000569796 KNSTRNQ9Y448 316 aa22.18■■□□□ 1.14
E4F1-209ENST00000569796 LAS1LQ9Y4W2 734 aaKnown RBP22.18■■□□□ 1.14
E4F1-209ENST00000569796 CDCA8Q53HL2 280 aa22.17■■□□□ 1.14
E4F1-209ENST00000569796 GOLGA6L22H0YM25 854 aa22.16■■□□□ 1.14
E4F1-209ENST00000569796 ERICH6BQ5W0A0 696 aa22.16■■□□□ 1.14
E4F1-209ENST00000569796 CASC1Q6TDU7 716 aa22.16■■□□□ 1.14
E4F1-209ENST00000569796 TPRNQ4KMQ1 711 aa22.16■■□□□ 1.14
E4F1-209ENST00000569796 CFDP1Q9UEE9 299 aaPredicted RBP22.15■■□□□ 1.14
E4F1-209ENST00000569796 PTMAP06454 111 aaKnown RBP22.15■■□□□ 1.14
E4F1-209ENST00000569796 NEUROD2Q15784 382 aa22.15■■□□□ 1.14
E4F1-209ENST00000569796 RTN4Q9NQC3 1192 aaKnown RBP22.15■■□□□ 1.14
E4F1-209ENST00000569796 NPHP1O15259 732 aa22.14■■□□□ 1.13
E4F1-209ENST00000569796 DNTTIP2Q5QJE6 756 aaKnown RBP22.14■■□□□ 1.13
E4F1-209ENST00000569796 FTSJ3Q8IY81 847 aaKnown RBP22.13■■□□□ 1.13
E4F1-209ENST00000569796 ZCCHC6Q5VYS8 1495 aaKnown RBP22.12■■□□□ 1.13
E4F1-209ENST00000569796 ZRSR1Q15695 479 aaKnown RBP22.12■■□□□ 1.13
E4F1-209ENST00000569796 POGKQ9P215 609 aa22.11■■□□□ 1.13
E4F1-209ENST00000569796 MAPK8IP3Q9UPT6 1336 aa22.1■■□□□ 1.13
E4F1-209ENST00000569796 CARD11Q9BXL7 1154 aa22.1■■□□□ 1.13
E4F1-209ENST00000569796 TAOK2Q9UL54 1235 aa22.08■■□□□ 1.13
E4F1-209ENST00000569796 NUDCQ9Y266 331 aa22.03■■□□□ 1.12
E4F1-209ENST00000569796 GOLGA3Q08378 1498 aa21.98■■□□□ 1.11
E4F1-209ENST00000569796 OS9Q13438 667 aaPredicted RBP21.98■■□□□ 1.11
E4F1-209ENST00000569796 FRAT1Q92837 279 aaPredicted RBP21.97■■□□□ 1.11
E4F1-209ENST00000569796 U2SURPO15042 1029 aaKnown RBP21.96■■□□□ 1.11
E4F1-209ENST00000569796 CC2D1BQ5T0F9 858 aaKnown RBP21.93■■□□□ 1.1
E4F1-209ENST00000569796 TRHP20396 242 aaPredicted RBP21.93■■□□□ 1.1
E4F1-209ENST00000569796 EEA1Q15075 1411 aa21.92■■□□□ 1.1
E4F1-209ENST00000569796 CEP162Q5TB80 1403 aa21.92■■□□□ 1.1
E4F1-209ENST00000569796 CHMP4BQ9H444 224 aaKnown RBP21.91■■□□□ 1.1
E4F1-209ENST00000569796 MLECQ14165 292 aa21.91■■□□□ 1.1
E4F1-209ENST00000569796 SOX12O15370 315 aa21.91■■□□□ 1.1
E4F1-209ENST00000569796 FGD1P98174 961 aa21.91■■□□□ 1.1
E4F1-209ENST00000569796 SUPT16HQ9Y5B9 1047 aaKnown RBP21.91■■□□□ 1.1
E4F1-209ENST00000569796 ERCC6Q03468 1493 aa21.91■■□□□ 1.1
E4F1-209ENST00000569796 RGS3P49796 1198 aa21.9■■□□□ 1.1
E4F1-209ENST00000569796 GOLGA2Q08379 1002 aa21.9■■□□□ 1.1
E4F1-209ENST00000569796 AMER1Q5JTC6 1135 aaPredicted RBP21.9■■□□□ 1.1
E4F1-209ENST00000569796 NAP1L2Q9ULW6 460 aaPredicted RBP21.89■■□□□ 1.1
E4F1-209ENST00000569796 RB1CC1Q8TDY2 1594 aa21.88■■□□□ 1.09
E4F1-209ENST00000569796 PNNQ9H307 717 aaKnown RBP21.87■■□□□ 1.09
E4F1-209ENST00000569796 KCNJ4P48050 445 aa21.87■■□□□ 1.09
E4F1-209ENST00000569796 PLCB2Q00722 1185 aa21.86■■□□□ 1.09
E4F1-209ENST00000569796 NOP58Q9Y2X3 529 aaKnown RBP21.84■■□□□ 1.09
E4F1-209ENST00000569796 KIF27Q86VH2 1401 aa21.84■■□□□ 1.09
E4F1-209ENST00000569796 CCDC180Q9P1Z9 1646 aa21.84■■□□□ 1.09
E4F1-209ENST00000569796 MS4A1P11836 297 aa21.84■■□□□ 1.09
E4F1-209ENST00000569796 WRNQ14191 1432 aaPredicted RBP eCLIP21.83■■□□□ 1.08
E4F1-209ENST00000569796 SIN3AQ96ST3 1273 aa21.82■■□□□ 1.08
E4F1-209ENST00000569796 GOLGA6L6A8MZA4 724 aa21.81■■□□□ 1.08
E4F1-209ENST00000569796 BAZ1BQ9UIG0 1483 aaKnown RBP21.81■■□□□ 1.08
E4F1-209ENST00000569796 SRPK2P78362 688 aaKnown RBP21.79■■□□□ 1.08
E4F1-209ENST00000569796 SAFB2Q14151 953 aaKnown RBP eCLIP21.79■■□□□ 1.08
E4F1-209ENST00000569796 HSP90AB1P08238 724 aaKnown RBP21.79■■□□□ 1.08
E4F1-209ENST00000569796 CCNB3Q8WWL7 1395 aa21.78■■□□□ 1.08
E4F1-209ENST00000569796 KANK1Q14678 1352 aa21.78■■□□□ 1.08
E4F1-209ENST00000569796 HDGFP51858 240 aaKnown RBP21.78■■□□□ 1.08
E4F1-209ENST00000569796 DCAF11Q8TEB1 546 aa21.77■■□□□ 1.08
E4F1-209ENST00000569796 TMF1P82094 1093 aa21.76■■□□□ 1.07
E4F1-209ENST00000569796 ISY1Q9ULR0 285 aaKnown RBP21.73■■□□□ 1.07
E4F1-209ENST00000569796 DEKP35659 375 aaKnown RBP21.72■■□□□ 1.07
E4F1-209ENST00000569796 CLSTN1O94985 981 aa21.71■■□□□ 1.07
E4F1-209ENST00000569796 CHAF1AQ13111 956 aaPredicted RBP21.71■■□□□ 1.07
E4F1-209ENST00000569796 EIF4G1Q04637 1599 aaKnown RBP21.71■■□□□ 1.07
E4F1-209ENST00000569796 CEP164Q9UPV0 1460 aa21.7■■□□□ 1.06
E4F1-209ENST00000569796 NCBP3Q53F19 620 aaKnown RBP21.69■■□□□ 1.06
E4F1-209ENST00000569796 MORC1Q86VD1 984 aa21.69■■□□□ 1.06
E4F1-209ENST00000569796 PPP4R2Q9NY27 417 aa21.68■■□□□ 1.06
E4F1-209ENST00000569796 STK26Q9P289 416 aa21.68■■□□□ 1.06
E4F1-209ENST00000569796 MSNP26038 577 aaKnown RBP21.68■■□□□ 1.06
E4F1-209ENST00000569796 NRDCO43847 1150 aa21.67■■□□□ 1.06
E4F1-209ENST00000569796 GOLGA6L4A6NEF3 574 aa21.67■■□□□ 1.06
E4F1-209ENST00000569796 GGT6Q6P531 493 aa21.67■■□□□ 1.06
E4F1-209ENST00000569796 RTF1Q92541 710 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms